RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 SRRM2Q9UQ35 2752 aaKnown RBP1.87□□□□□ -2.11
NF1-220ENST00000581113 ANGP03950 147 aaKnown RBP1.87□□□□□ -2.11
NF1-220ENST00000581113 GNG13Q9P2W3 67 aa1.87□□□□□ -2.11
NF1-220ENST00000581113 HMCN2Q8NDA2 5059 aa1.86□□□□□ -2.11
NF1-220ENST00000581113 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.86□□□□□ -2.11
NF1-220ENST00000581113 D6R8Y8 96 aa1.86□□□□□ -2.11
NF1-220ENST00000581113 M0QY20 66 aa1.86□□□□□ -2.11
NF1-220ENST00000581113 MGPP08493 103 aa1.86□□□□□ -2.11
NF1-220ENST00000581113 KRTAP10-4P60372 401 aaPredicted RBP1.86□□□□□ -2.11
NF1-220ENST00000581113 MUSTN1Q8IVN3 82 aa1.86□□□□□ -2.11
NF1-220ENST00000581113 SNURFQ9Y675 71 aa1.86□□□□□ -2.11
NF1-220ENST00000581113 V9GYV3 84 aa1.86□□□□□ -2.11
NF1-220ENST00000581113 COX8AP10176 69 aa1.85□□□□□ -2.11
NF1-220ENST00000581113 CLPSL2Q6UWE3 100 aa1.85□□□□□ -2.11
NF1-220ENST00000581113 ZNF625Q96I27 306 aaPredicted RBP1.85□□□□□ -2.11
NF1-220ENST00000581113 LINC01558Q9Y6Z2 57 aa1.85□□□□□ -2.11
NF1-220ENST00000581113 LRP1Q07954 4544 aaKnown RBP1.85□□□□□ -2.11
NF1-220ENST00000581113 FAT3Q8TDW7 4589 aa1.84□□□□□ -2.11
NF1-220ENST00000581113 Q6JHZ5 121 aa1.84□□□□□ -2.11
NF1-220ENST00000581113 UBR4Q5T4S7 5183 aa1.84□□□□□ -2.12
NF1-220ENST00000581113 C3orf79P0CE67 100 aa1.83□□□□□ -2.12
NF1-220ENST00000581113 Q96NJ1 140 aa1.83□□□□□ -2.12
NF1-220ENST00000581113 AMELXQ99217 191 aa1.83□□□□□ -2.12
NF1-220ENST00000581113 CNFNQ9BYD5 112 aa1.83□□□□□ -2.12
NF1-220ENST00000581113 INE1O15225 51 aa1.82□□□□□ -2.12
NF1-220ENST00000581113 RPL39LQ96EH5 51 aaKnown RBP1.82□□□□□ -2.12
NF1-220ENST00000581113 UBE2D4Q9Y2X8 147 aa1.82□□□□□ -2.12
NF1-220ENST00000581113 PKHD1L1Q86WI1 4243 aa1.82□□□□□ -2.12
NF1-220ENST00000581113 GVQW2A0A096LPI5 108 aaPredicted RBP1.82□□□□□ -2.12
NF1-220ENST00000581113 I3L3M4 83 aa1.82□□□□□ -2.12
NF1-220ENST00000581113 COX6A2Q02221 97 aa1.82□□□□□ -2.12
NF1-220ENST00000581113 PLAC8Q9NZF1 115 aa1.82□□□□□ -2.12
NF1-220ENST00000581113 LOC110117498A0A087WWA1 95 aa1.81□□□□□ -2.12
NF1-220ENST00000581113 LINC00959A0A1B0GUT2 108 aa1.81□□□□□ -2.12
NF1-220ENST00000581113 A0A1B0GUT8 65 aa1.81□□□□□ -2.12
NF1-220ENST00000581113 UQCR11O14957 56 aa1.81□□□□□ -2.12
NF1-220ENST00000581113 MT1HL1P0DM35 61 aa1.81□□□□□ -2.12
NF1-220ENST00000581113 POLR2KP53803 58 aaKnown RBP1.81□□□□□ -2.12
NF1-220ENST00000581113 A0A096LNI7 61 aa1.8□□□□□ -2.12
NF1-220ENST00000581113 FCER1GP30273 86 aa1.8□□□□□ -2.12
NF1-220ENST00000581113 IFI27P40305 119 aaPredicted RBP1.8□□□□□ -2.12
NF1-220ENST00000581113 SPINK7P58062 85 aa1.8□□□□□ -2.12
NF1-220ENST00000581113 BAGE3Q86Y29 109 aa1.8□□□□□ -2.12
NF1-220ENST00000581113 OBSCN-AS1Q96MR7 158 aa1.8□□□□□ -2.12
NF1-220ENST00000581113 SPINK6Q6UWN8 80 aa1.79□□□□□ -2.12
NF1-220ENST00000581113 LRP2P98164 4655 aa1.78□□□□□ -2.12
NF1-220ENST00000581113 TNXBP22105 4242 aa1.78□□□□□ -2.12
NF1-220ENST00000581113 TRBV7-4A0A0J9YYF1 115 aa1.78□□□□□ -2.12
NF1-220ENST00000581113 SMIM27A0A1W2PRY6 76 aa1.78□□□□□ -2.12
NF1-220ENST00000581113 ACYP2P14621 99 aa1.78□□□□□ -2.12
NF1-220ENST00000581113 RPL39P62891 51 aaKnown RBP1.77□□□□□ -2.13
NF1-220ENST00000581113 SPRR4Q96PI1 79 aa1.77□□□□□ -2.13
NF1-220ENST00000581113 SMIM2Q9BVW6 85 aa1.77□□□□□ -2.13
NF1-220ENST00000581113 LINC00472Q9H8W2 130 aa1.77□□□□□ -2.13
NF1-220ENST00000581113 NDUFA1O15239 70 aa1.76□□□□□ -2.13
NF1-220ENST00000581113 RNF213Q63HN8 5207 aa1.76□□□□□ -2.13
NF1-220ENST00000581113 H0Y9P7 68 aa1.75□□□□□ -2.13
NF1-220ENST00000581113 ATP5EP2Q5VTU8 51 aa1.75□□□□□ -2.13
NF1-220ENST00000581113 UNQ6190/PRO20217Q6UXQ8 127 aa1.75□□□□□ -2.13
NF1-220ENST00000581113 Q6ZQY7 126 aa1.75□□□□□ -2.13
NF1-220ENST00000581113 C6orf48Q9UBA6 75 aa1.75□□□□□ -2.13
NF1-220ENST00000581113 TRBV30A0A0K0K1B3 111 aa1.75□□□□□ -2.13
NF1-220ENST00000581113 ATXN8Q156A1 80 aa1.74□□□□□ -2.13
NF1-220ENST00000581113 LINC00846Q9NV44 126 aa1.74□□□□□ -2.13
NF1-220ENST00000581113 IGIPA6NJ69 53 aa1.73□□□□□ -2.13
NF1-220ENST00000581113 K7EMI3 77 aa1.73□□□□□ -2.13
NF1-220ENST00000581113 SPATA8Q6RVD6 105 aa1.73□□□□□ -2.13
NF1-220ENST00000581113 Q8IZM0 81 aa1.73□□□□□ -2.13
NF1-220ENST00000581113 TOMM7Q9P0U1 55 aa1.73□□□□□ -2.13
NF1-220ENST00000581113 CDKN2A-AS1Q9UH64 79 aa1.72□□□□□ -2.13
NF1-220ENST00000581113 LPAP08519 4548 aa1.71□□□□□ -2.14
NF1-220ENST00000581113 LINC01546A6NGU7 62 aa1.71□□□□□ -2.14
NF1-220ENST00000581113 LINC01549A6NIU2 74 aa1.71□□□□□ -2.14
NF1-220ENST00000581113 COX17Q14061 63 aa1.71□□□□□ -2.14
NF1-220ENST00000581113 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
NF1-220ENST00000581113 GPR98Q8WXG9 6306 aa1.71□□□□□ -2.14
NF1-220ENST00000581113 NREPQ16612 68 aa1.7□□□□□ -2.14
NF1-220ENST00000581113 KRTAP13-4Q3LI77 160 aa1.7□□□□□ -2.14
NF1-220ENST00000581113 MUC2Q02817 5179 aa1.68□□□□□ -2.14
NF1-220ENST00000581113 Q6ZRX8 168 aa1.68□□□□□ -2.14
NF1-220ENST00000581113 FAT4Q6V0I7 4981 aa1.67□□□□□ -2.14
NF1-220ENST00000581113 A0A1B0GU69 56 aa1.67□□□□□ -2.14
NF1-220ENST00000581113 PRLHP81277 87 aa1.67□□□□□ -2.14
NF1-220ENST00000581113 LINC00158P58513 81 aa1.66□□□□□ -2.14
NF1-220ENST00000581113 PLAC4Q8WY50 150 aa1.66□□□□□ -2.14
NF1-220ENST00000581113 NCR3O14931 201 aa1.65□□□□□ -2.15
NF1-220ENST00000581113 KRTAP12-1P59990 96 aa1.65□□□□□ -2.15
NF1-220ENST00000581113 SSBP3-AS1Q7Z2R9 100 aa1.65□□□□□ -2.15
NF1-220ENST00000581113 SMIM11BQ8TCY0 68 aa1.65□□□□□ -2.15
NF1-220ENST00000581113 KCNQ1DNQ9H478 68 aa1.65□□□□□ -2.15
NF1-220ENST00000581113 MUC17Q685J3 4493 aa1.65□□□□□ -2.15
NF1-220ENST00000581113 NDUFB1O75438 58 aa1.64□□□□□ -2.15
NF1-220ENST00000581113 SPRR1AP35321 89 aa1.64□□□□□ -2.15
NF1-220ENST00000581113 ETDCA0A1B0GVM5 59 aa1.63□□□□□ -2.15
NF1-220ENST00000581113 PLNP26678 52 aa1.63□□□□□ -2.15
NF1-220ENST00000581113 PCOTHQ58A44 107 aa1.63□□□□□ -2.15
NF1-220ENST00000581113 SPINK1P00995 79 aa1.63□□□□□ -2.15
NF1-220ENST00000581113 RPS29P62273 56 aaKnown RBP1.62□□□□□ -2.15
NF1-220ENST00000581113 SPRR1BP22528 89 aa1.59□□□□□ -2.15
NF1-220ENST00000581113 COX7BP24311 80 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms