RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 UBL5Q9BZL1 73 aa4.44□□□□□ -1.7
GGA3-210ENST00000580799 A0A1W2PPM0 123 aa4.43□□□□□ -1.7
GGA3-210ENST00000580799 C9orf118A6NHY6 69 aa4.43□□□□□ -1.7
GGA3-210ENST00000580799 BATFQ16520 125 aa4.43□□□□□ -1.7
GGA3-210ENST00000580799 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
GGA3-210ENST00000580799 SPRR2FQ96RM1 72 aa4.41□□□□□ -1.7
GGA3-210ENST00000580799 SPRR2EP22531 72 aa4.39□□□□□ -1.71
GGA3-210ENST00000580799 SPRR2BP35325 72 aa4.39□□□□□ -1.71
GGA3-210ENST00000580799 SPRR2AP35326 72 aa4.39□□□□□ -1.71
GGA3-210ENST00000580799 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
GGA3-210ENST00000580799 TAX1BP3O14907 124 aa4.38□□□□□ -1.71
GGA3-210ENST00000580799 CYP4F30PQ9H0H9 118 aa4.38□□□□□ -1.71
GGA3-210ENST00000580799 H0YAA0 97 aa4.37□□□□□ -1.71
GGA3-210ENST00000580799 J3QR89 54 aa4.36□□□□□ -1.71
GGA3-210ENST00000580799 GTF2H5Q6ZYL4 71 aa4.36□□□□□ -1.71
GGA3-210ENST00000580799 A0A087WVE0 104 aa4.35□□□□□ -1.71
GGA3-210ENST00000580799 NDUFC1O43677 76 aa4.34□□□□□ -1.71
GGA3-210ENST00000580799 SPCS1Q9Y6A9 102 aa4.34□□□□□ -1.71
GGA3-210ENST00000580799 LOC101927531A0A1B0GV80 90 aa4.33□□□□□ -1.72
GGA3-210ENST00000580799 KRTAP8-1Q8IUC2 63 aa4.33□□□□□ -1.72
GGA3-210ENST00000580799 TRAV22A0A0B4J277 110 aa4.32□□□□□ -1.72
GGA3-210ENST00000580799 A8MUN3 132 aa4.32□□□□□ -1.72
GGA3-210ENST00000580799 MT1XP80297 61 aa4.32□□□□□ -1.72
GGA3-210ENST00000580799 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
GGA3-210ENST00000580799 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
GGA3-210ENST00000580799 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
GGA3-210ENST00000580799 KRTAP12-2P59991 146 aa4.29□□□□□ -1.72
GGA3-210ENST00000580799 PLAC4Q8WY50 150 aa4.29□□□□□ -1.72
GGA3-210ENST00000580799 K7EP34 96 aa4.28□□□□□ -1.72
GGA3-210ENST00000580799 ADM2Q7Z4H4 148 aa4.28□□□□□ -1.72
GGA3-210ENST00000580799 PRO0461Q9UI25 63 aa4.28□□□□□ -1.72
GGA3-210ENST00000580799 SMIM20Q8N5G0 67 aa4.27□□□□□ -1.73
GGA3-210ENST00000580799 ACYP1P07311 99 aa4.25□□□□□ -1.73
GGA3-210ENST00000580799 SPRR2DP22532 72 aa4.25□□□□□ -1.73
GGA3-210ENST00000580799 F8W1H4 67 aa4.23□□□□□ -1.73
GGA3-210ENST00000580799 ATOX1O00244 68 aa4.23□□□□□ -1.73
GGA3-210ENST00000580799 ANAPC13Q9BS18 74 aa4.23□□□□□ -1.73
GGA3-210ENST00000580799 R4GN34 69 aa4.22□□□□□ -1.73
GGA3-210ENST00000580799 RPS28P62857 69 aaKnown RBP4.21□□□□□ -1.74
GGA3-210ENST00000580799 H0Y9P7 68 aa4.2□□□□□ -1.74
GGA3-210ENST00000580799 UQCRQO14949 82 aa4.2□□□□□ -1.74
GGA3-210ENST00000580799 C20orf197Q8N268 126 aa4.19□□□□□ -1.74
GGA3-210ENST00000580799 KRTAP4-8A0A0G2JLE6 195 aa4.18□□□□□ -1.74
GGA3-210ENST00000580799 KRTAP4-8Q9BYQ9 185 aa4.18□□□□□ -1.74
GGA3-210ENST00000580799 ETDBQ3ZM63 59 aa4.16□□□□□ -1.74
GGA3-210ENST00000580799 LCE3BQ5TA77 95 aa4.16□□□□□ -1.74
GGA3-210ENST00000580799 M0QZ58 72 aa4.15□□□□□ -1.75
GGA3-210ENST00000580799 SEC61GP60059 68 aa4.15□□□□□ -1.75
GGA3-210ENST00000580799 P0C880 135 aa4.14□□□□□ -1.75
GGA3-210ENST00000580799 ATP5EP2Q5VTU8 51 aa4.14□□□□□ -1.75
GGA3-210ENST00000580799 HIST1H4AP62805 103 aaKnown RBP4.12□□□□□ -1.75
GGA3-210ENST00000580799 MT-ATP8P03928 68 aa4.11□□□□□ -1.75
GGA3-210ENST00000580799 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
GGA3-210ENST00000580799 LINC00208Q96KT6 92 aa4.11□□□□□ -1.75
GGA3-210ENST00000580799 PRO0628Q9UI54 55 aa4.11□□□□□ -1.75
GGA3-210ENST00000580799 CCDC179H3BU77 68 aa4.1□□□□□ -1.75
GGA3-210ENST00000580799 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
GGA3-210ENST00000580799 LINC01554Q52M75 96 aa4.1□□□□□ -1.75
GGA3-210ENST00000580799 V9GYY9 64 aa4.09□□□□□ -1.75
GGA3-210ENST00000580799 FAM240AA0A1B0GVK7 77 aa4.08□□□□□ -1.76
GGA3-210ENST00000580799 MP68P56378 58 aa4.07□□□□□ -1.76
GGA3-210ENST00000580799 TMEM258P61165 79 aa4.04□□□□□ -1.76
GGA3-210ENST00000580799 DMAC1Q96GE9 116 aa4.03□□□□□ -1.76
GGA3-210ENST00000580799 OCR1Q9BZK8 76 aa4.03□□□□□ -1.76
GGA3-210ENST00000580799 LINC00643Q86TS7 51 aa4□□□□□ -1.77
GGA3-210ENST00000580799 H3BPC8 53 aa3.99□□□□□ -1.77
GGA3-210ENST00000580799 COX7CP15954 63 aa3.97□□□□□ -1.77
GGA3-210ENST00000580799 TRAV7A0A075B6U4 112 aa3.95□□□□□ -1.78
GGA3-210ENST00000580799 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
GGA3-210ENST00000580799 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
GGA3-210ENST00000580799 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
GGA3-210ENST00000580799 SPTSSBQ8NFR3 76 aa3.91□□□□□ -1.78
GGA3-210ENST00000580799 SERP1Q9Y6X1 66 aa3.91□□□□□ -1.78
GGA3-210ENST00000580799 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.79
GGA3-210ENST00000580799 SMIM26A0A096LP01 95 aa3.89□□□□□ -1.79
GGA3-210ENST00000580799 LOC100996750A0A140TA64 210 aa3.89□□□□□ -1.79
GGA3-210ENST00000580799 ACYP2P14621 99 aa3.89□□□□□ -1.79
GGA3-210ENST00000580799 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
GGA3-210ENST00000580799 SERP2Q8N6R1 65 aa3.88□□□□□ -1.79
GGA3-210ENST00000580799 ATP5EP56381 51 aaPredicted RBP3.87□□□□□ -1.79
GGA3-210ENST00000580799 PMAIP1Q13794 54 aa3.87□□□□□ -1.79
GGA3-210ENST00000580799 KRTAP19-7Q3SYF9 63 aa3.86□□□□□ -1.79
GGA3-210ENST00000580799 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
GGA3-210ENST00000580799 MT1EP04732 61 aa3.84□□□□□ -1.79
GGA3-210ENST00000580799 CAMK2N1Q7Z7J9 78 aa3.84□□□□□ -1.79
GGA3-210ENST00000580799 CHKB-CPT1BH3BT56 60 aa3.81□□□□□ -1.8
GGA3-210ENST00000580799 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
GGA3-210ENST00000580799 CYSTM1Q9H1C7 97 aa3.8□□□□□ -1.8
GGA3-210ENST00000580799 BRK1Q8WUW1 75 aa3.78□□□□□ -1.8
GGA3-210ENST00000580799 KRTAP13-4Q3LI77 160 aa3.77□□□□□ -1.81
GGA3-210ENST00000580799 MT1GP13640 62 aa3.76□□□□□ -1.81
GGA3-210ENST00000580799 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
GGA3-210ENST00000580799 PP632Q6XCG6 107 aa3.75□□□□□ -1.81
GGA3-210ENST00000580799 H7BZZ5 65 aa3.74□□□□□ -1.81
GGA3-210ENST00000580799 MT4P47944 62 aa3.72□□□□□ -1.81
GGA3-210ENST00000580799 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
GGA3-210ENST00000580799 A0A0D9SG42 100 aa3.71□□□□□ -1.82
GGA3-210ENST00000580799 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
GGA3-210ENST00000580799 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
GGA3-210ENST00000580799 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms