RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 STARD9Q9P2P6 4700 aa6.39□□□□□ -1.39
TRAPPC8-207ENST00000580104 DNAH8Q96JB1 4490 aa6.38□□□□□ -1.39
TRAPPC8-207ENST00000580104 KRTAP10-10P60014 251 aa6.35□□□□□ -1.39
TRAPPC8-207ENST00000580104 VPS13DQ5THJ4 4388 aa6.34□□□□□ -1.39
TRAPPC8-207ENST00000580104 MT1HL1P0DM35 61 aa6.33□□□□□ -1.4
TRAPPC8-207ENST00000580104 DNAH17Q9UFH2 4485 aa6.33□□□□□ -1.4
TRAPPC8-207ENST00000580104 LYSTQ99698 3801 aa6.32□□□□□ -1.4
TRAPPC8-207ENST00000580104 LRP1BQ9NZR2 4599 aa6.31□□□□□ -1.4
TRAPPC8-207ENST00000580104 FAT1Q14517 4588 aa6.29□□□□□ -1.4
TRAPPC8-207ENST00000580104 KMT2AQ03164 3969 aa6.28□□□□□ -1.4
TRAPPC8-207ENST00000580104 DNHD1Q96M86 4753 aa6.28□□□□□ -1.4
TRAPPC8-207ENST00000580104 DNAH2Q9P225 4427 aa6.27□□□□□ -1.41
TRAPPC8-207ENST00000580104 FRAS1Q86XX4 4008 aa6.25□□□□□ -1.41
TRAPPC8-207ENST00000580104 PRKDCP78527 4128 aaKnown RBP6.21□□□□□ -1.41
TRAPPC8-207ENST00000580104 DNAH3Q8TD57 4116 aa6.19□□□□□ -1.42
TRAPPC8-207ENST00000580104 ALMS1Q8TCU4 4167 aa6.17□□□□□ -1.42
TRAPPC8-207ENST00000580104 LORP23490 312 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC8-207ENST00000580104 DYNC1H1Q14204 4646 aaKnown RBP6.13□□□□□ -1.43
TRAPPC8-207ENST00000580104 KRTAP4-5Q9BYR2 181 aa6.11□□□□□ -1.43
TRAPPC8-207ENST00000580104 DNAH7Q8WXX0 4024 aa6.11□□□□□ -1.43
TRAPPC8-207ENST00000580104 VPS13BQ7Z7G8 4022 aa6.11□□□□□ -1.43
TRAPPC8-207ENST00000580104 MYCBP2O75592 4640 aa6.11□□□□□ -1.43
TRAPPC8-207ENST00000580104 CMYA5Q8N3K9 4069 aa6.09□□□□□ -1.44
TRAPPC8-207ENST00000580104 DNAH6Q9C0G6 4158 aa6.07□□□□□ -1.44
TRAPPC8-207ENST00000580104 HECTD4Q9Y4D8 3996 aa6.02□□□□□ -1.45
TRAPPC8-207ENST00000580104 PRO2289Q9P1D8 64 aa6□□□□□ -1.45
TRAPPC8-207ENST00000580104 SACSQ9NZJ4 4579 aa6□□□□□ -1.45
TRAPPC8-207ENST00000580104 DYNC2H1Q8NCM8 4307 aaKnown RBP5.99□□□□□ -1.45
TRAPPC8-207ENST00000580104 APOBP04114 4563 aaKnown RBP5.93□□□□□ -1.46
TRAPPC8-207ENST00000580104 RYR1P21817 5038 aa5.91□□□□□ -1.46
TRAPPC8-207ENST00000580104 FAT2Q9NYQ8 4349 aa5.89□□□□□ -1.47
TRAPPC8-207ENST00000580104 LRP1Q07954 4544 aaKnown RBP5.88□□□□□ -1.47
TRAPPC8-207ENST00000580104 FAT3Q8TDW7 4589 aa5.85□□□□□ -1.47
TRAPPC8-207ENST00000580104 KRTAP4-1Q9BYQ7 146 aa5.85□□□□□ -1.47
TRAPPC8-207ENST00000580104 KIAA1109Q2LD37 5005 aa5.79□□□□□ -1.48
TRAPPC8-207ENST00000580104 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
TRAPPC8-207ENST00000580104 HYDINQ4G0P3 5121 aa5.78□□□□□ -1.48
TRAPPC8-207ENST00000580104 PKHD1P08F94 4074 aa5.74□□□□□ -1.49
TRAPPC8-207ENST00000580104 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
TRAPPC8-207ENST00000580104 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
TRAPPC8-207ENST00000580104 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
TRAPPC8-207ENST00000580104 RYR3Q15413 4870 aa5.66□□□□□ -1.5
TRAPPC8-207ENST00000580104 KRTAP17-1Q9BYP8 105 aa5.66□□□□□ -1.5
TRAPPC8-207ENST00000580104 LRP2P98164 4655 aa5.64□□□□□ -1.51
TRAPPC8-207ENST00000580104 INE1O15225 51 aa5.63□□□□□ -1.51
TRAPPC8-207ENST00000580104 PKD1P98161 4303 aa5.5□□□□□ -1.53
TRAPPC8-207ENST00000580104 KMT2CQ8NEZ4 4911 aaKnown RBP5.47□□□□□ -1.53
TRAPPC8-207ENST00000580104 RYR2Q92736 4967 aa5.46□□□□□ -1.54
TRAPPC8-207ENST00000580104 HSPG2P98160 4391 aa5.45□□□□□ -1.54
TRAPPC8-207ENST00000580104 SPRR2GQ9BYE4 73 aa5.42□□□□□ -1.54
TRAPPC8-207ENST00000580104 LPAP08519 4548 aa5.42□□□□□ -1.54
TRAPPC8-207ENST00000580104 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
TRAPPC8-207ENST00000580104 MT1HP80294 61 aa5.4□□□□□ -1.55
TRAPPC8-207ENST00000580104 MT2AP02795 61 aa5.39□□□□□ -1.55
TRAPPC8-207ENST00000580104 MT1FP04733 61 aa5.36□□□□□ -1.55
TRAPPC8-207ENST00000580104 HERC2O95714 4834 aa5.29□□□□□ -1.56
TRAPPC8-207ENST00000580104 KRTAP19-1Q8IUB9 90 aa5.28□□□□□ -1.56
TRAPPC8-207ENST00000580104 PKHD1L1Q86WI1 4243 aa5.26□□□□□ -1.57
TRAPPC8-207ENST00000580104 TNXBP22105 4242 aa5.24□□□□□ -1.57
TRAPPC8-207ENST00000580104 KRTAP8-1Q8IUC2 63 aa5.24□□□□□ -1.57
TRAPPC8-207ENST00000580104 KRTAP19-5Q3LI72 72 aa5.17□□□□□ -1.58
TRAPPC8-207ENST00000580104 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
TRAPPC8-207ENST00000580104 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
TRAPPC8-207ENST00000580104 KRTAP10-5P60370 271 aa5.1□□□□□ -1.59
TRAPPC8-207ENST00000580104 LCE3CQ5T5A8 94 aa5.08□□□□□ -1.6
TRAPPC8-207ENST00000580104 EPPK1P58107 5090 aaKnown RBP5.06□□□□□ -1.6
TRAPPC8-207ENST00000580104 MT1XP80297 61 aa5.06□□□□□ -1.6
TRAPPC8-207ENST00000580104 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
TRAPPC8-207ENST00000580104 KRTAP19-2Q3LHN2 52 aa5.03□□□□□ -1.6
TRAPPC8-207ENST00000580104 LCE2CQ5TA81 110 aa5.03□□□□□ -1.6
TRAPPC8-207ENST00000580104 MUC17Q685J3 4493 aa5.02□□□□□ -1.61
TRAPPC8-207ENST00000580104 MT1BP07438 61 aa5.01□□□□□ -1.61
TRAPPC8-207ENST00000580104 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
TRAPPC8-207ENST00000580104 ABCA13Q86UQ4 5058 aa4.99□□□□□ -1.61
TRAPPC8-207ENST00000580104 PCLOQ9Y6V0 5065 aa4.97□□□□□ -1.61
TRAPPC8-207ENST00000580104 MUC2Q02817 5179 aa4.95□□□□□ -1.62
TRAPPC8-207ENST00000580104 HERC1Q15751 4861 aa4.95□□□□□ -1.62
TRAPPC8-207ENST00000580104 FLGP20930 4061 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC8-207ENST00000580104 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
TRAPPC8-207ENST00000580104 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
TRAPPC8-207ENST00000580104 BIRC6Q9NR09 4857 aa4.83□□□□□ -1.64
TRAPPC8-207ENST00000580104 FAT4Q6V0I7 4981 aa4.81□□□□□ -1.64
TRAPPC8-207ENST00000580104 UBR4Q5T4S7 5183 aa4.8□□□□□ -1.64
TRAPPC8-207ENST00000580104 KRTAP9-3Q9BYQ3 159 aa4.8□□□□□ -1.64
TRAPPC8-207ENST00000580104 RNF213Q63HN8 5207 aa4.74□□□□□ -1.65
TRAPPC8-207ENST00000580104 KRTAP4-7Q9BYR0 210 aa4.73□□□□□ -1.65
TRAPPC8-207ENST00000580104 HMCN2Q8NDA2 5059 aa4.73□□□□□ -1.65
TRAPPC8-207ENST00000580104 SPRR2FQ96RM1 72 aa4.69□□□□□ -1.66
TRAPPC8-207ENST00000580104 MT1GP13640 62 aa4.66□□□□□ -1.66
TRAPPC8-207ENST00000580104 LCE2BO14633 110 aa4.64□□□□□ -1.67
TRAPPC8-207ENST00000580104 FSIP2Q5CZC0 6907 aa4.63□□□□□ -1.67
TRAPPC8-207ENST00000580104 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
TRAPPC8-207ENST00000580104 LCE3BQ5TA77 95 aa4.59□□□□□ -1.67
TRAPPC8-207ENST00000580104 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
TRAPPC8-207ENST00000580104 MT1LQ93083 61 aa4.5□□□□□ -1.69
TRAPPC8-207ENST00000580104 SYNE1Q8NF91 8797 aaKnown RBP4.46□□□□□ -1.7
TRAPPC8-207ENST00000580104 MT1EP04732 61 aa4.45□□□□□ -1.7
TRAPPC8-207ENST00000580104 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
TRAPPC8-207ENST00000580104 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
TRAPPC8-207ENST00000580104 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms