RNA–Protein interactions for RNA: ENST00000572621.5

PRPF8-205, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF8, Length 7,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-205ENST00000572621 KRTAP4-5Q9BYR2 181 aa5.75□□□□□ -1.49
PRPF8-205ENST00000572621 AKAP9Q99996 3911 aa5.72□□□□□ -1.49
PRPF8-205ENST00000572621 KRTAP10-4P60372 401 aaPredicted RBP5.71□□□□□ -1.49
PRPF8-205ENST00000572621 ZNF469Q96JG9 3925 aaPredicted RBP5.69□□□□□ -1.5
PRPF8-205ENST00000572621 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
PRPF8-205ENST00000572621 DNAH2Q9P225 4427 aa5.52□□□□□ -1.53
PRPF8-205ENST00000572621 ALMS1Q8TCU4 4167 aa5.44□□□□□ -1.54
PRPF8-205ENST00000572621 DNAH1Q9P2D7 4330 aa5.37□□□□□ -1.55
PRPF8-205ENST00000572621 KRTAP4-1Q9BYQ7 146 aa5.34□□□□□ -1.56
PRPF8-205ENST00000572621 DNAH8Q96JB1 4490 aa5.29□□□□□ -1.56
PRPF8-205ENST00000572621 DNAH9Q9NYC9 4486 aa5.28□□□□□ -1.56
PRPF8-205ENST00000572621 DNAH10Q8IVF4 4471 aa5.28□□□□□ -1.56
PRPF8-205ENST00000572621 SPRR2GQ9BYE4 73 aa5.28□□□□□ -1.56
PRPF8-205ENST00000572621 KRTAP19-5Q3LI72 72 aa5.27□□□□□ -1.57
PRPF8-205ENST00000572621 VPS13BQ7Z7G8 4022 aa5.26□□□□□ -1.57
PRPF8-205ENST00000572621 MT1HP80294 61 aa5.26□□□□□ -1.57
PRPF8-205ENST00000572621 ANK2Q01484 3957 aa5.25□□□□□ -1.57
PRPF8-205ENST00000572621 LCE3CQ5T5A8 94 aa5.25□□□□□ -1.57
PRPF8-205ENST00000572621 FRAS1Q86XX4 4008 aa5.24□□□□□ -1.57
PRPF8-205ENST00000572621 KRTAP10-7P60409 375 aaPredicted RBP5.24□□□□□ -1.57
PRPF8-205ENST00000572621 LYSTQ99698 3801 aa5.24□□□□□ -1.57
PRPF8-205ENST00000572621 FAT1Q14517 4588 aa5.23□□□□□ -1.57
PRPF8-205ENST00000572621 MT2AP02795 61 aa5.22□□□□□ -1.57
PRPF8-205ENST00000572621 DNAH11Q96DT5 4516 aa5.21□□□□□ -1.58
PRPF8-205ENST00000572621 KMT2AQ03164 3969 aa5.2□□□□□ -1.58
PRPF8-205ENST00000572621 DNAH5Q8TE73 4624 aa5.2□□□□□ -1.58
PRPF8-205ENST00000572621 SPRR2FQ96RM1 72 aa5.19□□□□□ -1.58
PRPF8-205ENST00000572621 DNAH3Q8TD57 4116 aa5.13□□□□□ -1.59
PRPF8-205ENST00000572621 MT1FP04733 61 aa5.12□□□□□ -1.59
PRPF8-205ENST00000572621 DNAH17Q9UFH2 4485 aa5.12□□□□□ -1.59
PRPF8-205ENST00000572621 PLECQ15149 4684 aaKnown RBP5.09□□□□□ -1.59
PRPF8-205ENST00000572621 FAT2Q9NYQ8 4349 aa5.04□□□□□ -1.6
PRPF8-205ENST00000572621 CMYA5Q8N3K9 4069 aa5.03□□□□□ -1.6
PRPF8-205ENST00000572621 LCE3BQ5TA77 95 aa5□□□□□ -1.61
PRPF8-205ENST00000572621 VPS13DQ5THJ4 4388 aa4.97□□□□□ -1.61
PRPF8-205ENST00000572621 KRTAP12-4P60329 112 aa4.96□□□□□ -1.62
PRPF8-205ENST00000572621 LRP1BQ9NZR2 4599 aa4.95□□□□□ -1.62
PRPF8-205ENST00000572621 APOBP04114 4563 aaKnown RBP4.93□□□□□ -1.62
PRPF8-205ENST00000572621 DYNC2H1Q8NCM8 4307 aaKnown RBP4.93□□□□□ -1.62
PRPF8-205ENST00000572621 DNAH7Q8WXX0 4024 aa4.92□□□□□ -1.62
PRPF8-205ENST00000572621 KRTAP19-4Q3LI73 84 aa4.92□□□□□ -1.62
PRPF8-205ENST00000572621 STARD9Q9P2P6 4700 aa4.91□□□□□ -1.62
PRPF8-205ENST00000572621 PRKDCP78527 4128 aaKnown RBP4.9□□□□□ -1.62
PRPF8-205ENST00000572621 HECTD4Q9Y4D8 3996 aa4.89□□□□□ -1.63
PRPF8-205ENST00000572621 MYCBP2O75592 4640 aa4.86□□□□□ -1.63
PRPF8-205ENST00000572621 SACSQ9NZJ4 4579 aa4.84□□□□□ -1.63
PRPF8-205ENST00000572621 DNAH6Q9C0G6 4158 aa4.84□□□□□ -1.63
PRPF8-205ENST00000572621 KRTAP19-1Q8IUB9 90 aa4.84□□□□□ -1.64
PRPF8-205ENST00000572621 MT1GP13640 62 aa4.83□□□□□ -1.64
PRPF8-205ENST00000572621 FAT3Q8TDW7 4589 aa4.8□□□□□ -1.64
PRPF8-205ENST00000572621 SPRR2EP22531 72 aa4.8□□□□□ -1.64
PRPF8-205ENST00000572621 SPRR2BP35325 72 aa4.8□□□□□ -1.64
PRPF8-205ENST00000572621 SPRR2AP35326 72 aa4.8□□□□□ -1.64
PRPF8-205ENST00000572621 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
PRPF8-205ENST00000572621 MT1XP80297 61 aa4.77□□□□□ -1.65
PRPF8-205ENST00000572621 DYNC1H1Q14204 4646 aaKnown RBP4.72□□□□□ -1.65
PRPF8-205ENST00000572621 LCE3DQ9BYE3 92 aa4.7□□□□□ -1.66
PRPF8-205ENST00000572621 KRTAP4-8A0A0G2JLE6 195 aa4.69□□□□□ -1.66
PRPF8-205ENST00000572621 KRTAP4-8Q9BYQ9 185 aa4.69□□□□□ -1.66
PRPF8-205ENST00000572621 SPRR5A0A1B0GTR4 108 aa4.68□□□□□ -1.66
PRPF8-205ENST00000572621 LRP1Q07954 4544 aaKnown RBP4.66□□□□□ -1.66
PRPF8-205ENST00000572621 LCE2BO14633 110 aa4.65□□□□□ -1.66
PRPF8-205ENST00000572621 RYR1P21817 5038 aa4.65□□□□□ -1.67
PRPF8-205ENST00000572621 SPRR2DP22532 72 aa4.62□□□□□ -1.67
PRPF8-205ENST00000572621 DNHD1Q96M86 4753 aa4.62□□□□□ -1.67
PRPF8-205ENST00000572621 MT1BP07438 61 aa4.62□□□□□ -1.67
PRPF8-205ENST00000572621 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
PRPF8-205ENST00000572621 KRTAP9-8Q9BYQ0 159 aa4.55□□□□□ -1.68
PRPF8-205ENST00000572621 FLGP20930 4061 aaPredicted RBP4.48□□□□□ -1.69
PRPF8-205ENST00000572621 PKHD1P08F94 4074 aa4.48□□□□□ -1.69
PRPF8-205ENST00000572621 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
PRPF8-205ENST00000572621 KRTAP17-1Q9BYP8 105 aa4.45□□□□□ -1.7
PRPF8-205ENST00000572621 PKD1P98161 4303 aa4.43□□□□□ -1.7
PRPF8-205ENST00000572621 LRP2P98164 4655 aa4.42□□□□□ -1.7
PRPF8-205ENST00000572621 KRTAP9-3Q9BYQ3 159 aa4.41□□□□□ -1.7
PRPF8-205ENST00000572621 MT1LQ93083 61 aa4.39□□□□□ -1.71
PRPF8-205ENST00000572621 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
PRPF8-205ENST00000572621 PRM1P04553 51 aa4.37□□□□□ -1.71
PRPF8-205ENST00000572621 LPAP08519 4548 aa4.37□□□□□ -1.71
PRPF8-205ENST00000572621 LCE2CQ5TA81 110 aa4.33□□□□□ -1.72
PRPF8-205ENST00000572621 PKHD1L1Q86WI1 4243 aa4.3□□□□□ -1.72
PRPF8-205ENST00000572621 MT1EP04732 61 aa4.29□□□□□ -1.72
PRPF8-205ENST00000572621 LCE2DQ5TA82 110 aaPredicted RBP4.28□□□□□ -1.72
PRPF8-205ENST00000572621 HSPG2P98160 4391 aa4.26□□□□□ -1.73
PRPF8-205ENST00000572621 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
PRPF8-205ENST00000572621 RYR3Q15413 4870 aa4.25□□□□□ -1.73
PRPF8-205ENST00000572621 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
PRPF8-205ENST00000572621 MT3P25713 68 aa4.21□□□□□ -1.74
PRPF8-205ENST00000572621 MT4P47944 62 aa4.19□□□□□ -1.74
PRPF8-205ENST00000572621 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
PRPF8-205ENST00000572621 MT1MQ8N339 61 aa4.17□□□□□ -1.74
PRPF8-205ENST00000572621 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.74
PRPF8-205ENST00000572621 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
PRPF8-205ENST00000572621 TNXBP22105 4242 aa4.13□□□□□ -1.75
PRPF8-205ENST00000572621 KMT2CQ8NEZ4 4911 aaKnown RBP4.06□□□□□ -1.76
PRPF8-205ENST00000572621 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
PRPF8-205ENST00000572621 KIAA1109Q2LD37 5005 aa4.03□□□□□ -1.76
PRPF8-205ENST00000572621 KRTAP19-2Q3LHN2 52 aa4.03□□□□□ -1.76
PRPF8-205ENST00000572621 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
PRPF8-205ENST00000572621 HERC2O95714 4834 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms