RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 MT1BP07438 61 aa7.97□□□□□ -1.13
CTDNEP1-207ENST00000572043 Q5VV11 94 aa7.97□□□□□ -1.13
CTDNEP1-207ENST00000572043 SPRR2GQ9BYE4 73 aa7.97□□□□□ -1.13
CTDNEP1-207ENST00000572043 LINC00208Q96KT6 92 aa7.96□□□□□ -1.14
CTDNEP1-207ENST00000572043 NDUFC1O43677 76 aa7.92□□□□□ -1.14
CTDNEP1-207ENST00000572043 KRTAP19-8Q3LI54 63 aa7.92□□□□□ -1.14
CTDNEP1-207ENST00000572043 A6NN06 94 aa7.9□□□□□ -1.14
CTDNEP1-207ENST00000572043 MP68P56378 58 aa7.9□□□□□ -1.14
CTDNEP1-207ENST00000572043 OCR1Q9BZK8 76 aa7.9□□□□□ -1.14
CTDNEP1-207ENST00000572043 IMUPQ9GZP8 106 aa7.88□□□□□ -1.15
CTDNEP1-207ENST00000572043 A8MUN3 132 aa7.86□□□□□ -1.15
CTDNEP1-207ENST00000572043 J3QR89 54 aa7.85□□□□□ -1.15
CTDNEP1-207ENST00000572043 CRIPTQ9P021 101 aa7.83□□□□□ -1.16
CTDNEP1-207ENST00000572043 ADM2Q7Z4H4 148 aa7.8□□□□□ -1.16
CTDNEP1-207ENST00000572043 H0YAA0 97 aa7.79□□□□□ -1.16
CTDNEP1-207ENST00000572043 SCGB1A1P11684 91 aa7.79□□□□□ -1.16
CTDNEP1-207ENST00000572043 KRTAP6-3Q3LI67 103 aa7.79□□□□□ -1.16
CTDNEP1-207ENST00000572043 KRTAP10-5P60370 271 aa7.76□□□□□ -1.17
CTDNEP1-207ENST00000572043 H3BPC8 53 aa7.73□□□□□ -1.17
CTDNEP1-207ENST00000572043 DMAC1Q96GE9 116 aa7.67□□□□□ -1.18
CTDNEP1-207ENST00000572043 KRTAP3-2Q9BYR7 98 aa7.67□□□□□ -1.18
CTDNEP1-207ENST00000572043 SVIPQ8NHG7 77 aa7.65□□□□□ -1.18
CTDNEP1-207ENST00000572043 MT-ATP8P03928 68 aa7.64□□□□□ -1.19
CTDNEP1-207ENST00000572043 P0C880 135 aa7.61□□□□□ -1.19
CTDNEP1-207ENST00000572043 R4GN34 69 aa7.57□□□□□ -1.2
CTDNEP1-207ENST00000572043 K7ERU9 68 aa7.55□□□□□ -1.2
CTDNEP1-207ENST00000572043 M0QZ58 72 aa7.54□□□□□ -1.2
CTDNEP1-207ENST00000572043 C20orf197Q8N268 126 aa7.54□□□□□ -1.2
CTDNEP1-207ENST00000572043 TRAV7A0A075B6U4 112 aa7.52□□□□□ -1.21
CTDNEP1-207ENST00000572043 PLAC4Q8WY50 150 aa7.52□□□□□ -1.21
CTDNEP1-207ENST00000572043 SMIM20Q8N5G0 67 aa7.5□□□□□ -1.21
CTDNEP1-207ENST00000572043 NEBP20929 6669 aa7.5□□□□□ -1.21
CTDNEP1-207ENST00000572043 ACYP2P14621 99 aa7.49□□□□□ -1.21
CTDNEP1-207ENST00000572043 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
CTDNEP1-207ENST00000572043 MT1XP80297 61 aa7.47□□□□□ -1.21
CTDNEP1-207ENST00000572043 LINC01554Q52M75 96 aa7.47□□□□□ -1.21
CTDNEP1-207ENST00000572043 SNURFQ9Y675 71 aa7.44□□□□□ -1.22
CTDNEP1-207ENST00000572043 MUC12Q9UKN1 5478 aa7.43□□□□□ -1.22
CTDNEP1-207ENST00000572043 KRTAP5-9P26371 169 aa7.42□□□□□ -1.22
CTDNEP1-207ENST00000572043 CHKB-CPT1BH3BT56 60 aa7.4□□□□□ -1.22
CTDNEP1-207ENST00000572043 SPTSSBQ8NFR3 76 aa7.39□□□□□ -1.23
CTDNEP1-207ENST00000572043 KMT2DO14686 5537 aa7.3□□□□□ -1.24
CTDNEP1-207ENST00000572043 SPRR2FQ96RM1 72 aa7.28□□□□□ -1.24
CTDNEP1-207ENST00000572043 SERP2Q8N6R1 65 aa7.27□□□□□ -1.25
CTDNEP1-207ENST00000572043 KRTAP8-1Q8IUC2 63 aa7.26□□□□□ -1.25
CTDNEP1-207ENST00000572043 KRTAP20-1Q3LI63 56 aa7.25□□□□□ -1.25
CTDNEP1-207ENST00000572043 SPANXA2-OT1Q8N9U9 137 aa7.25□□□□□ -1.25
CTDNEP1-207ENST00000572043 KRTAP12-2P59991 146 aa7.24□□□□□ -1.25
CTDNEP1-207ENST00000572043 MDN1Q9NU22 5596 aa7.21□□□□□ -1.26
CTDNEP1-207ENST00000572043 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
CTDNEP1-207ENST00000572043 SPRR2EP22531 72 aa7.18□□□□□ -1.26
CTDNEP1-207ENST00000572043 SPRR2BP35325 72 aa7.18□□□□□ -1.26
CTDNEP1-207ENST00000572043 SPRR2AP35326 72 aa7.18□□□□□ -1.26
CTDNEP1-207ENST00000572043 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
CTDNEP1-207ENST00000572043 KRTAP10-7P60409 375 aaPredicted RBP7.16□□□□□ -1.26
CTDNEP1-207ENST00000572043 KRTAP13-4Q3LI77 160 aa7.12□□□□□ -1.27
CTDNEP1-207ENST00000572043 COA5Q86WW8 74 aa7.11□□□□□ -1.27
CTDNEP1-207ENST00000572043 KRTAP10-12P60413 245 aa7.07□□□□□ -1.28
CTDNEP1-207ENST00000572043 COX7CP15954 63 aa7.05□□□□□ -1.28
CTDNEP1-207ENST00000572043 LCE1AQ5T7P2 110 aa7.05□□□□□ -1.28
CTDNEP1-207ENST00000572043 KRTAP2-3P0C7H8 128 aa7.04□□□□□ -1.28
CTDNEP1-207ENST00000572043 KRTAP2-4Q9BYR9 128 aa7.04□□□□□ -1.28
CTDNEP1-207ENST00000572043 CAMK2N1Q7Z7J9 78 aa6.99□□□□□ -1.29
CTDNEP1-207ENST00000572043 CYSTM1Q9H1C7 97 aa6.99□□□□□ -1.29
CTDNEP1-207ENST00000572043 SEC61GP60059 68 aa6.98□□□□□ -1.29
CTDNEP1-207ENST00000572043 SERP1Q9Y6X1 66 aa6.97□□□□□ -1.29
CTDNEP1-207ENST00000572043 A0A0D9SG42 100 aa6.95□□□□□ -1.3
CTDNEP1-207ENST00000572043 H7BZZ5 65 aa6.95□□□□□ -1.3
CTDNEP1-207ENST00000572043 SPRR2DP22532 72 aa6.93□□□□□ -1.3
CTDNEP1-207ENST00000572043 SPATA8Q6RVD6 105 aa6.91□□□□□ -1.3
CTDNEP1-207ENST00000572043 A0A1B0GU33 70 aa6.86□□□□□ -1.31
CTDNEP1-207ENST00000572043 H3BS24 57 aa6.85□□□□□ -1.31
CTDNEP1-207ENST00000572043 SPINT4Q6UDR6 99 aa6.84□□□□□ -1.31
CTDNEP1-207ENST00000572043 ANAPC13Q9BS18 74 aa6.82□□□□□ -1.32
CTDNEP1-207ENST00000572043 KRTAP2-2Q9BYT5 123 aa6.82□□□□□ -1.32
CTDNEP1-207ENST00000572043 KRTAP2-1Q9BYU5 128 aa6.82□□□□□ -1.32
CTDNEP1-207ENST00000572043 A0A1B0GU69 56 aa6.75□□□□□ -1.33
CTDNEP1-207ENST00000572043 KRTAP12-1P59990 96 aa6.74□□□□□ -1.33
CTDNEP1-207ENST00000572043 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
CTDNEP1-207ENST00000572043 CCDC179H3BU77 68 aa6.71□□□□□ -1.34
CTDNEP1-207ENST00000572043 KRTAP19-7Q3SYF9 63 aa6.68□□□□□ -1.34
CTDNEP1-207ENST00000572043 A8MU10 97 aa6.66□□□□□ -1.34
CTDNEP1-207ENST00000572043 SMIM26A0A096LP01 95 aa6.64□□□□□ -1.35
CTDNEP1-207ENST00000572043 MT1EP04732 61 aa6.62□□□□□ -1.35
CTDNEP1-207ENST00000572043 KRTAP19-3Q7Z4W3 81 aa6.56□□□□□ -1.36
CTDNEP1-207ENST00000572043 ATP5EP56381 51 aaPredicted RBP6.55□□□□□ -1.36
CTDNEP1-207ENST00000572043 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
CTDNEP1-207ENST00000572043 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
CTDNEP1-207ENST00000572043 PRR15LQ9BU68 103 aa6.52□□□□□ -1.37
CTDNEP1-207ENST00000572043 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.38
CTDNEP1-207ENST00000572043 LINC01558Q9Y6Z2 57 aa6.46□□□□□ -1.38
CTDNEP1-207ENST00000572043 TNP1P09430 55 aa6.41□□□□□ -1.38
CTDNEP1-207ENST00000572043 TMEM258P61165 79 aa6.4□□□□□ -1.38
CTDNEP1-207ENST00000572043 LCE3AQ5TA76 89 aa6.4□□□□□ -1.38
CTDNEP1-207ENST00000572043 DSTQ03001 7570 aaKnown RBP6.37□□□□□ -1.39
CTDNEP1-207ENST00000572043 MT1GP13640 62 aa6.37□□□□□ -1.39
CTDNEP1-207ENST00000572043 PCP4P48539 62 aa6.37□□□□□ -1.39
CTDNEP1-207ENST00000572043 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
CTDNEP1-207ENST00000572043 MT1LQ93083 61 aa6.33□□□□□ -1.4
CTDNEP1-207ENST00000572043 UQCR11O14957 56 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms