RNA–Protein interactions for RNA: ENST00000570473.5

TRIM25-203, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-203ENST00000570473 MXRA5Q9NR99 2828 aa3.53□□□□□ -1.84
TRIM25-203ENST00000570473 KRTAP10-3P60369 221 aa3.53□□□□□ -1.84
TRIM25-203ENST00000570473 ANK3Q12955 4377 aaKnown RBP3.53□□□□□ -1.84
TRIM25-203ENST00000570473 ZNF292O60281 2723 aa3.52□□□□□ -1.85
TRIM25-203ENST00000570473 ITPR2Q14571 2701 aa3.52□□□□□ -1.85
TRIM25-203ENST00000570473 VPS13CQ709C8 3753 aa3.5□□□□□ -1.85
TRIM25-203ENST00000570473 SACSQ9NZJ4 4579 aa3.49□□□□□ -1.85
TRIM25-203ENST00000570473 FASNP49327 2511 aaKnown RBP3.48□□□□□ -1.85
TRIM25-203ENST00000570473 HIVEP1P15822 2718 aa3.48□□□□□ -1.85
TRIM25-203ENST00000570473 HUWE1Q7Z6Z7 4374 aaKnown RBP3.48□□□□□ -1.85
TRIM25-203ENST00000570473 CEP295Q9C0D2 2601 aa3.48□□□□□ -1.85
TRIM25-203ENST00000570473 DNAH9Q9NYC9 4486 aa3.48□□□□□ -1.85
TRIM25-203ENST00000570473 POLQO75417 2590 aa3.48□□□□□ -1.85
TRIM25-203ENST00000570473 STAB2Q8WWQ8 2551 aa3.48□□□□□ -1.85
TRIM25-203ENST00000570473 PRKDCP78527 4128 aaKnown RBP3.46□□□□□ -1.85
TRIM25-203ENST00000570473 DNAH10Q8IVF4 4471 aa3.45□□□□□ -1.86
TRIM25-203ENST00000570473 ATRQ13535 2644 aa3.45□□□□□ -1.86
TRIM25-203ENST00000570473 FBN3Q75N90 2809 aa3.45□□□□□ -1.86
TRIM25-203ENST00000570473 DNAH7Q8WXX0 4024 aa3.44□□□□□ -1.86
TRIM25-203ENST00000570473 DNAH17Q9UFH2 4485 aa3.44□□□□□ -1.86
TRIM25-203ENST00000570473 FLNCQ14315 2725 aa3.42□□□□□ -1.86
TRIM25-203ENST00000570473 KRTAP1-1Q07627 177 aa3.41□□□□□ -1.86
TRIM25-203ENST00000570473 TEP1Q99973 2627 aaKnown RBP3.41□□□□□ -1.86
TRIM25-203ENST00000570473 PKD1L1Q8TDX9 2849 aa3.39□□□□□ -1.87
TRIM25-203ENST00000570473 VPS13BQ7Z7G8 4022 aa3.39□□□□□ -1.87
TRIM25-203ENST00000570473 KRTAP8-1Q8IUC2 63 aa3.39□□□□□ -1.87
TRIM25-203ENST00000570473 CSMD2Q7Z408 3487 aa3.38□□□□□ -1.87
TRIM25-203ENST00000570473 HECTD4Q9Y4D8 3996 aa3.38□□□□□ -1.87
TRIM25-203ENST00000570473 NOTCH1P46531 2555 aa3.38□□□□□ -1.87
TRIM25-203ENST00000570473 MT3P25713 68 aa3.37□□□□□ -1.87
TRIM25-203ENST00000570473 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
TRIM25-203ENST00000570473 KMT2AQ03164 3969 aa3.36□□□□□ -1.87
TRIM25-203ENST00000570473 ZANQ9Y493 2812 aa3.36□□□□□ -1.87
TRIM25-203ENST00000570473 SVEP1Q4LDE5 3571 aa3.36□□□□□ -1.87
TRIM25-203ENST00000570473 EYSQ5T1H1 3165 aa3.35□□□□□ -1.87
TRIM25-203ENST00000570473 MYO18BQ8IUG5 2567 aa3.34□□□□□ -1.88
TRIM25-203ENST00000570473 ANKRD11Q6UB99 2663 aaPredicted RBP3.34□□□□□ -1.88
TRIM25-203ENST00000570473 PKD1P98161 4303 aa3.33□□□□□ -1.88
TRIM25-203ENST00000570473 KRTAP2-3P0C7H8 128 aa3.33□□□□□ -1.88
TRIM25-203ENST00000570473 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
TRIM25-203ENST00000570473 KRTAP2-4Q9BYR9 128 aa3.33□□□□□ -1.88
TRIM25-203ENST00000570473 KRTAP2-1Q9BYU5 128 aa3.33□□□□□ -1.88
TRIM25-203ENST00000570473 CUBNO60494 3623 aa3.32□□□□□ -1.88
TRIM25-203ENST00000570473 M0R2T5 61 aa3.32□□□□□ -1.88
TRIM25-203ENST00000570473 KRTAP6-3Q3LI67 103 aa3.29□□□□□ -1.88
TRIM25-203ENST00000570473 APOBP04114 4563 aaKnown RBP3.29□□□□□ -1.88
TRIM25-203ENST00000570473 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
TRIM25-203ENST00000570473 FBN2P35556 2912 aa3.28□□□□□ -1.88
TRIM25-203ENST00000570473 NOTCH2Q04721 2471 aa3.26□□□□□ -1.89
TRIM25-203ENST00000570473 ZNF469Q96JG9 3925 aaPredicted RBP3.25□□□□□ -1.89
TRIM25-203ENST00000570473 HSPG2P98160 4391 aa3.24□□□□□ -1.89
TRIM25-203ENST00000570473 ACACBO00763 2458 aa3.24□□□□□ -1.89
TRIM25-203ENST00000570473 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
TRIM25-203ENST00000570473 PKHD1L1Q86WI1 4243 aa3.23□□□□□ -1.89
TRIM25-203ENST00000570473 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
TRIM25-203ENST00000570473 FAT3Q8TDW7 4589 aa3.19□□□□□ -1.9
TRIM25-203ENST00000570473 STAB1Q9NY15 2570 aa3.18□□□□□ -1.9
TRIM25-203ENST00000570473 KRTAP10-5P60370 271 aa3.17□□□□□ -1.9
TRIM25-203ENST00000570473 NSD1Q96L73 2696 aaPredicted RBP3.16□□□□□ -1.9
TRIM25-203ENST00000570473 KRTAP10-4P60372 401 aaPredicted RBP3.15□□□□□ -1.91
TRIM25-203ENST00000570473 FLNAP21333 2647 aaKnown RBP3.15□□□□□ -1.91
TRIM25-203ENST00000570473 IGSF10Q6WRI0 2623 aa3.13□□□□□ -1.91
TRIM25-203ENST00000570473 DNAH5Q8TE73 4624 aa3.13□□□□□ -1.91
TRIM25-203ENST00000570473 KRTAP12-3P60328 96 aa3.13□□□□□ -1.91
TRIM25-203ENST00000570473 TENM3Q9P273 2699 aa3.13□□□□□ -1.91
TRIM25-203ENST00000570473 LRP1Q07954 4544 aaKnown RBP3.11□□□□□ -1.91
TRIM25-203ENST00000570473 MGAM2Q2M2H8 2515 aa3.11□□□□□ -1.91
TRIM25-203ENST00000570473 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
TRIM25-203ENST00000570473 FAT2Q9NYQ8 4349 aa3.06□□□□□ -1.92
TRIM25-203ENST00000570473 PLECQ15149 4684 aaKnown RBP3.05□□□□□ -1.92
TRIM25-203ENST00000570473 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
TRIM25-203ENST00000570473 LCE3CQ5T5A8 94 aa3.03□□□□□ -1.92
TRIM25-203ENST00000570473 J3QKU1 62 aa3.02□□□□□ -1.93
TRIM25-203ENST00000570473 SMR3BP02814 79 aaPredicted RBP3.02□□□□□ -1.93
TRIM25-203ENST00000570473 KRTAP10-7P60409 375 aaPredicted RBP3.02□□□□□ -1.93
TRIM25-203ENST00000570473 TNXBP22105 4242 aa3.01□□□□□ -1.93
TRIM25-203ENST00000570473 FLNBO75369 2602 aaKnown RBP3.01□□□□□ -1.93
TRIM25-203ENST00000570473 MAST4O15021 2626 aa3□□□□□ -1.93
TRIM25-203ENST00000570473 DYNC1H1Q14204 4646 aaKnown RBP3□□□□□ -1.93
TRIM25-203ENST00000570473 TENM1Q9UKZ4 2725 aa3□□□□□ -1.93
TRIM25-203ENST00000570473 PKHD1P08F94 4074 aa2.97□□□□□ -1.93
TRIM25-203ENST00000570473 STARD9Q9P2P6 4700 aa2.94□□□□□ -1.94
TRIM25-203ENST00000570473 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
TRIM25-203ENST00000570473 LPAP08519 4548 aa2.89□□□□□ -1.95
TRIM25-203ENST00000570473 SPRR2GQ9BYE4 73 aa2.85□□□□□ -1.95
TRIM25-203ENST00000570473 KRTAP21-3Q3LHN1 58 aa2.83□□□□□ -1.96
TRIM25-203ENST00000570473 KRTAP19-5Q3LI72 72 aa2.83□□□□□ -1.96
TRIM25-203ENST00000570473 LRP1BQ9NZR2 4599 aa2.8□□□□□ -1.96
TRIM25-203ENST00000570473 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
TRIM25-203ENST00000570473 PRM1P04553 51 aa2.73□□□□□ -1.97
TRIM25-203ENST00000570473 MUC17Q685J3 4493 aa2.73□□□□□ -1.97
TRIM25-203ENST00000570473 MT1AP04731 61 aa2.7□□□□□ -1.98
TRIM25-203ENST00000570473 FAT1Q14517 4588 aa2.69□□□□□ -1.98
TRIM25-203ENST00000570473 HERC1Q15751 4861 aa2.69□□□□□ -1.98
TRIM25-203ENST00000570473 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
TRIM25-203ENST00000570473 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
TRIM25-203ENST00000570473 KRTAP19-8Q3LI54 63 aa2.58□□□□□ -2
TRIM25-203ENST00000570473 KRTAP19-2Q3LHN2 52 aa2.57□□□□□ -2
TRIM25-203ENST00000570473 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
TRIM25-203ENST00000570473 MT1EP04732 61 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms