RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 KRTAP10-10P60014 251 aa1.86□□□□□ -2.11
UBR1-211ENST00000569971 PCOTHQ58A44 107 aa1.86□□□□□ -2.11
UBR1-211ENST00000569971 Q6ZSA8 131 aa1.86□□□□□ -2.11
UBR1-211ENST00000569971 MEGF8Q7Z7M0 2845 aa1.86□□□□□ -2.11
UBR1-211ENST00000569971 COA5Q86WW8 74 aa1.85□□□□□ -2.11
UBR1-211ENST00000569971 TENM2Q9NT68 2774 aa1.85□□□□□ -2.11
UBR1-211ENST00000569971 FBN3Q75N90 2809 aa1.84□□□□□ -2.11
UBR1-211ENST00000569971 SPINK1P00995 79 aa1.84□□□□□ -2.11
UBR1-211ENST00000569971 VPS13DQ5THJ4 4388 aa1.83□□□□□ -2.12
UBR1-211ENST00000569971 DNAH10Q8IVF4 4471 aa1.83□□□□□ -2.12
UBR1-211ENST00000569971 A8MUN3 132 aa1.83□□□□□ -2.12
UBR1-211ENST00000569971 ACYP2P14621 99 aa1.83□□□□□ -2.12
UBR1-211ENST00000569971 SPAG11AQ6PDA7 123 aa1.83□□□□□ -2.12
UBR1-211ENST00000569971 PRR15LQ9BU68 103 aa1.83□□□□□ -2.12
UBR1-211ENST00000569971 SRRM2Q9UQ35 2752 aaKnown RBP1.83□□□□□ -2.12
UBR1-211ENST00000569971 CHKB-CPT1BH3BT56 60 aa1.82□□□□□ -2.12
UBR1-211ENST00000569971 RPS29P62273 56 aaKnown RBP1.82□□□□□ -2.12
UBR1-211ENST00000569971 CSMD3Q7Z407 3707 aa1.81□□□□□ -2.12
UBR1-211ENST00000569971 LINC01558Q9Y6Z2 57 aa1.81□□□□□ -2.12
UBR1-211ENST00000569971 PLECQ15149 4684 aaKnown RBP1.8□□□□□ -2.12
UBR1-211ENST00000569971 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
UBR1-211ENST00000569971 Q5VV11 94 aa1.8□□□□□ -2.12
UBR1-211ENST00000569971 DMAC1Q96GE9 116 aa1.8□□□□□ -2.12
UBR1-211ENST00000569971 RETNLBQ9BQ08 111 aa1.8□□□□□ -2.12
UBR1-211ENST00000569971 DNAH17Q9UFH2 4485 aa1.8□□□□□ -2.12
UBR1-211ENST00000569971 LYSTQ99698 3801 aa1.79□□□□□ -2.12
UBR1-211ENST00000569971 DNAH7Q8WXX0 4024 aa1.79□□□□□ -2.12
UBR1-211ENST00000569971 PRKDCP78527 4128 aaKnown RBP1.78□□□□□ -2.12
UBR1-211ENST00000569971 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
UBR1-211ENST00000569971 ATP11AUNQ6ZP68 121 aa1.78□□□□□ -2.12
UBR1-211ENST00000569971 C7orf65Q6ZTY9 151 aa1.78□□□□□ -2.12
UBR1-211ENST00000569971 SPTSSBQ8NFR3 76 aa1.78□□□□□ -2.12
UBR1-211ENST00000569971 TGP01266 2768 aa1.78□□□□□ -2.12
UBR1-211ENST00000569971 STARD9Q9P2P6 4700 aa1.78□□□□□ -2.13
UBR1-211ENST00000569971 DNAH2Q9P225 4427 aa1.77□□□□□ -2.13
UBR1-211ENST00000569971 A0A1B0GU69 56 aa1.77□□□□□ -2.13
UBR1-211ENST00000569971 SMR3BP02814 79 aaPredicted RBP1.77□□□□□ -2.13
UBR1-211ENST00000569971 C20orf166-AS1Q96NR2 134 aa1.77□□□□□ -2.13
UBR1-211ENST00000569971 CDC42SE1Q9NRR8 79 aa1.77□□□□□ -2.13
UBR1-211ENST00000569971 DNAH8Q96JB1 4490 aa1.77□□□□□ -2.13
UBR1-211ENST00000569971 ALMS1Q8TCU4 4167 aa1.77□□□□□ -2.13
UBR1-211ENST00000569971 PMAIP1Q13794 54 aa1.76□□□□□ -2.13
UBR1-211ENST00000569971 DNAH6Q9C0G6 4158 aa1.74□□□□□ -2.13
UBR1-211ENST00000569971 C9orf92A6NGG3 77 aa1.74□□□□□ -2.13
UBR1-211ENST00000569971 SPINK7P58062 85 aa1.74□□□□□ -2.13
UBR1-211ENST00000569971 KRTAP10-4P60372 401 aaPredicted RBP1.74□□□□□ -2.13
UBR1-211ENST00000569971 LCA10Q71F78 164 aa1.74□□□□□ -2.13
UBR1-211ENST00000569971 PKD1P98161 4303 aa1.73□□□□□ -2.13
UBR1-211ENST00000569971 HECTD4Q9Y4D8 3996 aa1.73□□□□□ -2.13
UBR1-211ENST00000569971 UQCR11O14957 56 aa1.73□□□□□ -2.13
UBR1-211ENST00000569971 KTN1-AS1Q86SY8 53 aa1.73□□□□□ -2.13
UBR1-211ENST00000569971 DNAH11Q96DT5 4516 aa1.72□□□□□ -2.13
UBR1-211ENST00000569971 A6NN06 94 aa1.72□□□□□ -2.13
UBR1-211ENST00000569971 MIR22HGQ0VDD5 57 aa1.72□□□□□ -2.13
UBR1-211ENST00000569971 Q5VSD8 79 aa1.71□□□□□ -2.14
UBR1-211ENST00000569971 SPATA8Q6RVD6 105 aa1.71□□□□□ -2.14
UBR1-211ENST00000569971 LRP1BQ9NZR2 4599 aa1.71□□□□□ -2.14
UBR1-211ENST00000569971 KMT2AQ03164 3969 aa1.7□□□□□ -2.14
UBR1-211ENST00000569971 DNAH5Q8TE73 4624 aa1.7□□□□□ -2.14
UBR1-211ENST00000569971 FAT2Q9NYQ8 4349 aa1.7□□□□□ -2.14
UBR1-211ENST00000569971 DNHD1Q96M86 4753 aa1.69□□□□□ -2.14
UBR1-211ENST00000569971 FRAS1Q86XX4 4008 aa1.69□□□□□ -2.14
UBR1-211ENST00000569971 COX6B2Q6YFQ2 88 aa1.69□□□□□ -2.14
UBR1-211ENST00000569971 RPL37P61927 97 aaKnown RBP1.68□□□□□ -2.14
UBR1-211ENST00000569971 H1FX-AS1Q4G0G2 97 aa1.66□□□□□ -2.14
UBR1-211ENST00000569971 S4R3F8 94 aa1.65□□□□□ -2.15
UBR1-211ENST00000569971 SACSQ9NZJ4 4579 aa1.65□□□□□ -2.15
UBR1-211ENST00000569971 HYDINQ4G0P3 5121 aa1.65□□□□□ -2.15
UBR1-211ENST00000569971 KRTAP6-3Q3LI67 103 aa1.64□□□□□ -2.15
UBR1-211ENST00000569971 DYNC1H1Q14204 4646 aaKnown RBP1.64□□□□□ -2.15
UBR1-211ENST00000569971 H0YAA0 97 aa1.63□□□□□ -2.15
UBR1-211ENST00000569971 MT1HL1P0DM35 61 aa1.63□□□□□ -2.15
UBR1-211ENST00000569971 TPRXLQ17RH7 258 aa1.63□□□□□ -2.15
UBR1-211ENST00000569971 PRO2289Q9P1D8 64 aa1.63□□□□□ -2.15
UBR1-211ENST00000569971 VPS13BQ7Z7G8 4022 aa1.63□□□□□ -2.15
UBR1-211ENST00000569971 APOBP04114 4563 aaKnown RBP1.62□□□□□ -2.15
UBR1-211ENST00000569971 FLG2Q5D862 2391 aaPredicted RBP1.61□□□□□ -2.15
UBR1-211ENST00000569971 PKHD1P08F94 4074 aa1.61□□□□□ -2.15
UBR1-211ENST00000569971 PKHD1L1Q86WI1 4243 aa1.61□□□□□ -2.15
UBR1-211ENST00000569971 CSAG1Q6PB30 78 aa1.6□□□□□ -2.15
UBR1-211ENST00000569971 FAT1Q14517 4588 aa1.59□□□□□ -2.15
UBR1-211ENST00000569971 LINC01554Q52M75 96 aa1.59□□□□□ -2.15
UBR1-211ENST00000569971 RYR2Q92736 4967 aa1.58□□□□□ -2.16
UBR1-211ENST00000569971 FAT3Q8TDW7 4589 aa1.58□□□□□ -2.16
UBR1-211ENST00000569971 A0A0D9SG42 100 aa1.57□□□□□ -2.16
UBR1-211ENST00000569971 M0QZ58 72 aa1.57□□□□□ -2.16
UBR1-211ENST00000569971 ROMO1P60602 79 aa1.57□□□□□ -2.16
UBR1-211ENST00000569971 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
UBR1-211ENST00000569971 KRTAP12-3P60328 96 aa1.55□□□□□ -2.16
UBR1-211ENST00000569971 KRTAP13-4Q3LI77 160 aa1.55□□□□□ -2.16
UBR1-211ENST00000569971 HSPG2P98160 4391 aa1.55□□□□□ -2.16
UBR1-211ENST00000569971 TNXBP22105 4242 aa1.54□□□□□ -2.16
UBR1-211ENST00000569971 KMT2CQ8NEZ4 4911 aaKnown RBP1.54□□□□□ -2.16
UBR1-211ENST00000569971 LRP1Q07954 4544 aaKnown RBP1.53□□□□□ -2.16
UBR1-211ENST00000569971 CRIPTQ9P021 101 aa1.53□□□□□ -2.16
UBR1-211ENST00000569971 KRTAP12-1P59990 96 aa1.52□□□□□ -2.17
UBR1-211ENST00000569971 DMBT1Q9UGM3 2413 aaPredicted RBP1.51□□□□□ -2.17
UBR1-211ENST00000569971 RYR1P21817 5038 aa1.51□□□□□ -2.17
UBR1-211ENST00000569971 RYR3Q15413 4870 aa1.49□□□□□ -2.17
UBR1-211ENST00000569971 KIAA1109Q2LD37 5005 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms