RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 C9orf92A6NGG3 77 aa4.13□□□□□ -1.75
ATXN3-250ENST00000568290 H1FX-AS1Q4G0G2 97 aa4.13□□□□□ -1.75
ATXN3-250ENST00000568290 DNAH8Q96JB1 4490 aa4.13□□□□□ -1.75
ATXN3-250ENST00000568290 FBN3Q75N90 2809 aa4.12□□□□□ -1.75
ATXN3-250ENST00000568290 LINC01554Q52M75 96 aa4.12□□□□□ -1.75
ATXN3-250ENST00000568290 A0A1B0GVY2 172 aa4.11□□□□□ -1.75
ATXN3-250ENST00000568290 SMR3BP02814 79 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-250ENST00000568290 KMT2AQ03164 3969 aa4.07□□□□□ -1.76
ATXN3-250ENST00000568290 KRTAP10-4P60372 401 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-250ENST00000568290 RPL37P61927 97 aaKnown RBP4.05□□□□□ -1.76
ATXN3-250ENST00000568290 FRAS1Q86XX4 4008 aa4.05□□□□□ -1.76
ATXN3-250ENST00000568290 H0YAA0 97 aa4.03□□□□□ -1.76
ATXN3-250ENST00000568290 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
ATXN3-250ENST00000568290 DNAH11Q96DT5 4516 aa4.03□□□□□ -1.76
ATXN3-250ENST00000568290 KRTAP10-8P60410 259 aa4.02□□□□□ -1.77
ATXN3-250ENST00000568290 CSAG1Q6PB30 78 aa4.02□□□□□ -1.77
ATXN3-250ENST00000568290 S4R3F8 94 aa4.02□□□□□ -1.77
ATXN3-250ENST00000568290 DNAH5Q8TE73 4624 aa4.01□□□□□ -1.77
ATXN3-250ENST00000568290 PKD1P98161 4303 aa3.99□□□□□ -1.77
ATXN3-250ENST00000568290 KRTAP25-1Q3LHN0 102 aa3.99□□□□□ -1.77
ATXN3-250ENST00000568290 Q5VSD8 79 aa3.99□□□□□ -1.77
ATXN3-250ENST00000568290 ROMO1P60602 79 aa3.98□□□□□ -1.77
ATXN3-250ENST00000568290 VPS13BQ7Z7G8 4022 aa3.97□□□□□ -1.77
ATXN3-250ENST00000568290 KRTAP17-1Q9BYP8 105 aa3.97□□□□□ -1.77
ATXN3-250ENST00000568290 LRP1BQ9NZR2 4599 aa3.97□□□□□ -1.77
ATXN3-250ENST00000568290 ADM2Q7Z4H4 148 aa3.96□□□□□ -1.78
ATXN3-250ENST00000568290 SACSQ9NZJ4 4579 aa3.94□□□□□ -1.78
ATXN3-250ENST00000568290 M0QZ58 72 aa3.93□□□□□ -1.78
ATXN3-250ENST00000568290 FAT2Q9NYQ8 4349 aa3.93□□□□□ -1.78
ATXN3-250ENST00000568290 TPRXLQ17RH7 258 aa3.92□□□□□ -1.78
ATXN3-250ENST00000568290 CRIPTQ9P021 101 aa3.9□□□□□ -1.79
ATXN3-250ENST00000568290 FLG2Q5D862 2391 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-250ENST00000568290 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
ATXN3-250ENST00000568290 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-250ENST00000568290 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
ATXN3-250ENST00000568290 SEC61BP60468 96 aaKnown RBP3.86□□□□□ -1.79
ATXN3-250ENST00000568290 DNHD1Q96M86 4753 aa3.85□□□□□ -1.79
ATXN3-250ENST00000568290 DYNC1H1Q14204 4646 aaKnown RBP3.85□□□□□ -1.79
ATXN3-250ENST00000568290 PKHD1L1Q86WI1 4243 aa3.84□□□□□ -1.79
ATXN3-250ENST00000568290 APOBP04114 4563 aaKnown RBP3.83□□□□□ -1.8
ATXN3-250ENST00000568290 A0A0D9SG42 100 aa3.83□□□□□ -1.8
ATXN3-250ENST00000568290 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
ATXN3-250ENST00000568290 PKHD1P08F94 4074 aa3.83□□□□□ -1.8
ATXN3-250ENST00000568290 HYDINQ4G0P3 5121 aa3.79□□□□□ -1.8
ATXN3-250ENST00000568290 SPINT4Q6UDR6 99 aa3.79□□□□□ -1.8
ATXN3-250ENST00000568290 MT1HL1P0DM35 61 aa3.77□□□□□ -1.81
ATXN3-250ENST00000568290 DMBT1Q9UGM3 2413 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-250ENST00000568290 P0C880 135 aa3.76□□□□□ -1.81
ATXN3-250ENST00000568290 R4GN34 69 aa3.76□□□□□ -1.81
ATXN3-250ENST00000568290 KRTAP13-4Q3LI77 160 aa3.74□□□□□ -1.81
ATXN3-250ENST00000568290 KRTAP9-8Q9BYQ0 159 aa3.73□□□□□ -1.81
ATXN3-250ENST00000568290 KRTAP12-1P59990 96 aa3.72□□□□□ -1.81
ATXN3-250ENST00000568290 FAT1Q14517 4588 aa3.7□□□□□ -1.82
ATXN3-250ENST00000568290 TNXBP22105 4242 aa3.69□□□□□ -1.82
ATXN3-250ENST00000568290 KRTAP12-2P59991 146 aa3.69□□□□□ -1.82
ATXN3-250ENST00000568290 FAT3Q8TDW7 4589 aa3.69□□□□□ -1.82
ATXN3-250ENST00000568290 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
ATXN3-250ENST00000568290 RYR2Q92736 4967 aa3.67□□□□□ -1.82
ATXN3-250ENST00000568290 HSPG2P98160 4391 aa3.63□□□□□ -1.83
ATXN3-250ENST00000568290 LRP1Q07954 4544 aaKnown RBP3.6□□□□□ -1.83
ATXN3-250ENST00000568290 CAMK2N1Q7Z7J9 78 aa3.59□□□□□ -1.83
ATXN3-250ENST00000568290 RYR1P21817 5038 aa3.59□□□□□ -1.84
ATXN3-250ENST00000568290 C10orf95Q9H7T3 257 aa3.57□□□□□ -1.84
ATXN3-250ENST00000568290 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
ATXN3-250ENST00000568290 MYCBP2O75592 4640 aa3.52□□□□□ -1.85
ATXN3-250ENST00000568290 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
ATXN3-250ENST00000568290 PLAC4Q8WY50 150 aa3.51□□□□□ -1.85
ATXN3-250ENST00000568290 TNP1P09430 55 aa3.5□□□□□ -1.85
ATXN3-250ENST00000568290 KMT2CQ8NEZ4 4911 aaKnown RBP3.49□□□□□ -1.85
ATXN3-250ENST00000568290 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
ATXN3-250ENST00000568290 RYR3Q15413 4870 aa3.46□□□□□ -1.86
ATXN3-250ENST00000568290 KIAA1109Q2LD37 5005 aa3.4□□□□□ -1.87
ATXN3-250ENST00000568290 KRTAP4-1Q9BYQ7 146 aa3.39□□□□□ -1.87
ATXN3-250ENST00000568290 MT3P25713 68 aa3.38□□□□□ -1.87
ATXN3-250ENST00000568290 KRTAP19-2Q3LHN2 52 aa3.38□□□□□ -1.87
ATXN3-250ENST00000568290 LRP2P98164 4655 aa3.37□□□□□ -1.87
ATXN3-250ENST00000568290 M0R2T5 61 aa3.33□□□□□ -1.88
ATXN3-250ENST00000568290 SPRR2GQ9BYE4 73 aa3.32□□□□□ -1.88
ATXN3-250ENST00000568290 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
ATXN3-250ENST00000568290 FLGP20930 4061 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-250ENST00000568290 LPAP08519 4548 aa3.23□□□□□ -1.89
ATXN3-250ENST00000568290 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
ATXN3-250ENST00000568290 KRTAP10-10P60014 251 aa3.21□□□□□ -1.9
ATXN3-250ENST00000568290 EPPK1P58107 5090 aaKnown RBP3.21□□□□□ -1.9
ATXN3-250ENST00000568290 ABCA13Q86UQ4 5058 aa3.2□□□□□ -1.9
ATXN3-250ENST00000568290 PRO2289Q9P1D8 64 aa3.2□□□□□ -1.9
ATXN3-250ENST00000568290 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
ATXN3-250ENST00000568290 BIRC6Q9NR09 4857 aa3.19□□□□□ -1.9
ATXN3-250ENST00000568290 HERC2O95714 4834 aa3.19□□□□□ -1.9
ATXN3-250ENST00000568290 KRTAP19-8Q3LI54 63 aa3.17□□□□□ -1.9
ATXN3-250ENST00000568290 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-250ENST00000568290 MT1HP80294 61 aa3.16□□□□□ -1.9
ATXN3-250ENST00000568290 HERC1Q15751 4861 aa3.16□□□□□ -1.9
ATXN3-250ENST00000568290 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
ATXN3-250ENST00000568290 KRTAP8-1Q8IUC2 63 aa3.13□□□□□ -1.91
ATXN3-250ENST00000568290 MT2AP02795 61 aa3.12□□□□□ -1.91
ATXN3-250ENST00000568290 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
ATXN3-250ENST00000568290 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
ATXN3-250ENST00000568290 MT1FP04733 61 aa3.07□□□□□ -1.92
ATXN3-250ENST00000568290 KRTAP10-12P60413 245 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms