RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 VPS8Q8N3P4 1428 aa-0.69□□□□□ -2.52
CDH1-211ENST00000567320 ETDCA0A1B0GVM5 59 aa-0.69□□□□□ -2.52
CDH1-211ENST00000567320 PVALEFA0A1B0GWK0 134 aa-0.69□□□□□ -2.52
CDH1-211ENST00000567320 H3BUA1 57 aa-0.69□□□□□ -2.52
CDH1-211ENST00000567320 M0R143 59 aa-0.69□□□□□ -2.52
CDH1-211ENST00000567320 MRPL33O75394 65 aaKnown RBP-0.69□□□□□ -2.52
CDH1-211ENST00000567320 SPART-AS1P0CW21 52 aa-0.69□□□□□ -2.52
CDH1-211ENST00000567320 S100PP25815 95 aa-0.69□□□□□ -2.52
CDH1-211ENST00000567320 S100A16Q96FQ6 103 aaKnown RBP-0.69□□□□□ -2.52
CDH1-211ENST00000567320 TCEAL7Q9BRU2 100 aa-0.69□□□□□ -2.52
CDH1-211ENST00000567320 TIAM1Q13009 1591 aa-0.7□□□□□ -2.52
CDH1-211ENST00000567320 PREX2Q70Z35 1606 aa-0.7□□□□□ -2.52
CDH1-211ENST00000567320 A0A087WXM4 84 aa-0.7□□□□□ -2.52
CDH1-211ENST00000567320 DEFB121Q5J5C9 76 aa-0.7□□□□□ -2.52
CDH1-211ENST00000567320 LEAP2Q969E1 77 aa-0.7□□□□□ -2.52
CDH1-211ENST00000567320 DCAF1Q9Y4B6 1507 aa-0.7□□□□□ -2.52
CDH1-211ENST00000567320 CFAP74Q9C0B2 1584 aa-0.7□□□□□ -2.52
CDH1-211ENST00000567320 MADDQ8WXG6 1647 aa-0.71□□□□□ -2.52
CDH1-211ENST00000567320 ATMQ13315 3056 aa-0.71□□□□□ -2.52
CDH1-211ENST00000567320 MT1FP04733 61 aa-0.71□□□□□ -2.52
CDH1-211ENST00000567320 PKIAP61925 76 aa-0.71□□□□□ -2.52
CDH1-211ENST00000567320 PYY3Q5JQD4 70 aa-0.71□□□□□ -2.52
CDH1-211ENST00000567320 KAAG1Q9UBP8 84 aa-0.71□□□□□ -2.52
CDH1-211ENST00000567320 ABCA8O94911 1581 aa-0.71□□□□□ -2.52
CDH1-211ENST00000567320 ZFHX4Q86UP3 3567 aa-0.71□□□□□ -2.52
CDH1-211ENST00000567320 RRBP1Q9P2E9 1410 aaKnown RBP-0.72□□□□□ -2.52
CDH1-211ENST00000567320 H3BUT2 72 aa-0.72□□□□□ -2.52
CDH1-211ENST00000567320 RPS29P62273 56 aaKnown RBP-0.72□□□□□ -2.52
CDH1-211ENST00000567320 DEFB136Q30KP8 78 aa-0.72□□□□□ -2.52
CDH1-211ENST00000567320 IQGAP3Q86VI3 1631 aa-0.72□□□□□ -2.52
CDH1-211ENST00000567320 ABCA9Q8IUA7 1624 aa-0.72□□□□□ -2.52
CDH1-211ENST00000567320 DEFB114Q30KQ6 69 aa-0.73□□□□□ -2.53
CDH1-211ENST00000567320 ALS2Q96Q42 1657 aa-0.73□□□□□ -2.53
CDH1-211ENST00000567320 FREM2Q5SZK8 3169 aa-0.73□□□□□ -2.53
CDH1-211ENST00000567320 CRYBG3Q68DQ2 2970 aa-0.73□□□□□ -2.53
CDH1-211ENST00000567320 UACAQ9BZF9 1416 aa-0.73□□□□□ -2.53
CDH1-211ENST00000567320 ABCC1P33527 1531 aa-0.74□□□□□ -2.53
CDH1-211ENST00000567320 KANTRA0A1W2PQU2 76 aa-0.74□□□□□ -2.53
CDH1-211ENST00000567320 H3BVH4 76 aa-0.74□□□□□ -2.53
CDH1-211ENST00000567320 S100A8P05109 93 aa-0.74□□□□□ -2.53
CDH1-211ENST00000567320 ST20Q9HBF5 79 aa-0.74□□□□□ -2.53
CDH1-211ENST00000567320 HILPDAQ9Y5L2 63 aa-0.74□□□□□ -2.53
CDH1-211ENST00000567320 SPEGQ15772 3267 aa-0.74□□□□□ -2.53
CDH1-211ENST00000567320 EFCAB6Q5THR3 1501 aa-0.74□□□□□ -2.53
CDH1-211ENST00000567320 WDFY3Q8IZQ1 3526 aa-0.75□□□□□ -2.53
CDH1-211ENST00000567320 CCDC180Q9P1Z9 1646 aa-0.75□□□□□ -2.53
CDH1-211ENST00000567320 BOD1L1Q8NFC6 3051 aa-0.75□□□□□ -2.53
CDH1-211ENST00000567320 POLR2KP53803 58 aaKnown RBP-0.75□□□□□ -2.53
CDH1-211ENST00000567320 WFDC10BQ8IUB3 73 aa-0.75□□□□□ -2.53
CDH1-211ENST00000567320 Q9H521 79 aa-0.75□□□□□ -2.53
CDH1-211ENST00000567320 V9GYS6 101 aa-0.75□□□□□ -2.53
CDH1-211ENST00000567320 PRUNE2Q8WUY3 3088 aa-0.75□□□□□ -2.53
CDH1-211ENST00000567320 ANKARQ7Z5J8 1434 aa-0.75□□□□□ -2.53
CDH1-211ENST00000567320 LMO7Q8WWI1 1683 aa-0.75□□□□□ -2.53
CDH1-211ENST00000567320 PCNTO95613 3336 aa-0.76□□□□□ -2.53
CDH1-211ENST00000567320 ITPR2Q14571 2701 aa-0.76□□□□□ -2.53
CDH1-211ENST00000567320 ADIRFQ15847 76 aa-0.76□□□□□ -2.53
CDH1-211ENST00000567320 LINC00308Q8TCZ7 52 aa-0.76□□□□□ -2.53
CDH1-211ENST00000567320 MROH2AA6NES4 1674 aa-0.77□□□□□ -2.53
CDH1-211ENST00000567320 ABCA6Q8N139 1617 aa-0.77□□□□□ -2.53
CDH1-211ENST00000567320 EEA1Q15075 1411 aa-0.77□□□□□ -2.53
CDH1-211ENST00000567320 K7EMI3 77 aa-0.77□□□□□ -2.53
CDH1-211ENST00000567320 M0R1W7 72 aa-0.77□□□□□ -2.53
CDH1-211ENST00000567320 C18orf32Q8TCD1 76 aa-0.77□□□□□ -2.53
CDH1-211ENST00000567320 ABRACLQ9P1F3 81 aa-0.77□□□□□ -2.53
CDH1-211ENST00000567320 SZT2Q5T011 3432 aa-0.77□□□□□ -2.53
CDH1-211ENST00000567320 NRXN3Q9Y4C0 1643 aa-0.78□□□□□ -2.53
CDH1-211ENST00000567320 SYCP2Q9BX26 1530 aa-0.78□□□□□ -2.53
CDH1-211ENST00000567320 SMIM27A0A1W2PRY6 76 aa-0.78□□□□□ -2.53
CDH1-211ENST00000567320 ATXN8Q156A1 80 aa-0.78□□□□□ -2.53
CDH1-211ENST00000567320 VPS13CQ709C8 3753 aa-0.79□□□□□ -2.54
CDH1-211ENST00000567320 EP400Q96L91 3159 aa-0.79□□□□□ -2.54
CDH1-211ENST00000567320 LINC01549A6NIU2 74 aa-0.79□□□□□ -2.54
CDH1-211ENST00000567320 CFAP54Q96N23 3096 aa-0.79□□□□□ -2.54
CDH1-211ENST00000567320 SCRIBQ14160 1630 aa-0.79□□□□□ -2.54
CDH1-211ENST00000567320 RB1CC1Q8TDY2 1594 aa-0.79□□□□□ -2.54
CDH1-211ENST00000567320 UGGT2Q9NYU1 1516 aa-0.79□□□□□ -2.54
CDH1-211ENST00000567320 WDFY4Q6ZS81 3184 aa-0.8□□□□□ -2.54
CDH1-211ENST00000567320 DMDP11532 3685 aa-0.8□□□□□ -2.54
CDH1-211ENST00000567320 IGIPA6NJ69 53 aa-0.8□□□□□ -2.54
CDH1-211ENST00000567320 S100A13Q99584 98 aa-0.8□□□□□ -2.54
CDH1-211ENST00000567320 TMEM167BQ9NRX6 74 aa-0.8□□□□□ -2.54
CDH1-211ENST00000567320 CEP350Q5VT06 3117 aa-0.8□□□□□ -2.54
CDH1-211ENST00000567320 CCDC18Q5T9S5 1454 aa-0.8□□□□□ -2.54
CDH1-211ENST00000567320 IQGAP1P46940 1657 aa-0.81□□□□□ -2.54
CDH1-211ENST00000567320 UGGT1Q9NYU2 1555 aa-0.81□□□□□ -2.54
CDH1-211ENST00000567320 TFF3Q07654 80 aa-0.81□□□□□ -2.54
CDH1-211ENST00000567320 GNG13Q9P2W3 67 aa-0.81□□□□□ -2.54
CDH1-211ENST00000567320 DCHS1Q96JQ0 3298 aa-0.81□□□□□ -2.54
CDH1-211ENST00000567320 MUC3AQ02505 3323 aa-0.82□□□□□ -2.54
CDH1-211ENST00000567320 NFAT5O94916 1531 aa-0.82□□□□□ -2.54
CDH1-211ENST00000567320 NMES1Q9C002 83 aa-0.82□□□□□ -2.54
CDH1-211ENST00000567320 AGLP35573 1532 aa-0.83□□□□□ -2.54
CDH1-211ENST00000567320 DUOX2Q9NRD8 1548 aa-0.83□□□□□ -2.54
CDH1-211ENST00000567320 DDX60Q8IY21 1712 aaKnown RBP-0.83□□□□□ -2.54
CDH1-211ENST00000567320 DEFB131AP59861 70 aa-0.83□□□□□ -2.54
CDH1-211ENST00000567320 FRYLO94915 3013 aa-0.84□□□□□ -2.54
CDH1-211ENST00000567320 CLTCL1P53675 1640 aa-0.84□□□□□ -2.54
CDH1-211ENST00000567320 GNG2P59768 71 aa-0.84□□□□□ -2.54
CDH1-211ENST00000567320 KRTAP19-2Q3LHN2 52 aa-0.85□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms