RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 H0YAA0 97 aa6.38□□□□□ -1.39
CLK3-217ENST00000566126 TMEM238LA0A1B0GVL6 79 aa6.37□□□□□ -1.39
CLK3-217ENST00000566126 A6NJY4 79 aa6.37□□□□□ -1.39
CLK3-217ENST00000566126 HCG22E2RYF7 251 aa6.36□□□□□ -1.39
CLK3-217ENST00000566126 A0A1B0GW54 56 aa6.35□□□□□ -1.39
CLK3-217ENST00000566126 KRTAP19-3Q7Z4W3 81 aa6.35□□□□□ -1.39
CLK3-217ENST00000566126 PSMB2P49721 201 aa6.32□□□□□ -1.4
CLK3-217ENST00000566126 HSD52Q0P140 79 aa6.31□□□□□ -1.4
CLK3-217ENST00000566126 NREPQ16612 68 aa6.31□□□□□ -1.4
CLK3-217ENST00000566126 UQCR10Q9UDW1 63 aa6.31□□□□□ -1.4
CLK3-217ENST00000566126 FXYD2P54710 66 aa6.3□□□□□ -1.4
CLK3-217ENST00000566126 CXCL6P80162 114 aa6.3□□□□□ -1.4
CLK3-217ENST00000566126 ADM2Q7Z4H4 148 aa6.3□□□□□ -1.4
CLK3-217ENST00000566126 SMIM6P0DI80 62 aa6.28□□□□□ -1.4
CLK3-217ENST00000566126 KRTAP5-4Q6L8H1 288 aa6.28□□□□□ -1.4
CLK3-217ENST00000566126 CYSTM1Q9H1C7 97 aa6.28□□□□□ -1.4
CLK3-217ENST00000566126 COX6CP09669 75 aa6.27□□□□□ -1.41
CLK3-217ENST00000566126 LOC110117498A0A087WWA1 95 aa6.26□□□□□ -1.41
CLK3-217ENST00000566126 BAALC-AS2P0C853 105 aa6.25□□□□□ -1.41
CLK3-217ENST00000566126 KRTAP19-7Q3SYF9 63 aa6.25□□□□□ -1.41
CLK3-217ENST00000566126 CASC2Q6XLA1 102 aa6.25□□□□□ -1.41
CLK3-217ENST00000566126 MT1EP04732 61 aa6.22□□□□□ -1.41
CLK3-217ENST00000566126 K7ERJ3 54 aa6.21□□□□□ -1.42
CLK3-217ENST00000566126 LOC105371267A0A1B0GV96 52 aa6.2□□□□□ -1.42
CLK3-217ENST00000566126 R4GN34 69 aa6.19□□□□□ -1.42
CLK3-217ENST00000566126 JMJD7-PLA2G4BH0Y9G9 81 aa6.17□□□□□ -1.42
CLK3-217ENST00000566126 M0R143 59 aa6.16□□□□□ -1.42
CLK3-217ENST00000566126 TSTD3H0UI37 97 aa6.15□□□□□ -1.42
CLK3-217ENST00000566126 Q8N9L7 120 aa6.15□□□□□ -1.42
CLK3-217ENST00000566126 C14orf132Q9NPU4 83 aa6.15□□□□□ -1.42
CLK3-217ENST00000566126 NDUFC1O43677 76 aa6.14□□□□□ -1.43
CLK3-217ENST00000566126 M0QZ58 72 aa6.11□□□□□ -1.43
CLK3-217ENST00000566126 BPY2O14599 106 aa6.11□□□□□ -1.43
CLK3-217ENST00000566126 SCGB1C2P0DMR2 95 aa6.08□□□□□ -1.44
CLK3-217ENST00000566126 LINC01554Q52M75 96 aa6.08□□□□□ -1.44
CLK3-217ENST00000566126 P0C880 135 aa6.07□□□□□ -1.44
CLK3-217ENST00000566126 MT1GP13640 62 aa6.07□□□□□ -1.44
CLK3-217ENST00000566126 KRTAP4-12Q9BQ66 201 aa6.04□□□□□ -1.44
CLK3-217ENST00000566126 ATXN8Q156A1 80 aa6.01□□□□□ -1.45
CLK3-217ENST00000566126 NAA38Q9BRA0 125 aaKnown RBP6□□□□□ -1.45
CLK3-217ENST00000566126 CYP4F30PQ9H0H9 118 aa6□□□□□ -1.45
CLK3-217ENST00000566126 BATFQ16520 125 aa5.99□□□□□ -1.45
CLK3-217ENST00000566126 MT1MQ8N339 61 aa5.99□□□□□ -1.45
CLK3-217ENST00000566126 K7EP34 96 aa5.98□□□□□ -1.45
CLK3-217ENST00000566126 KRTAP20-2Q3LI61 65 aa5.98□□□□□ -1.45
CLK3-217ENST00000566126 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
CLK3-217ENST00000566126 C9orf118A6NHY6 69 aa5.97□□□□□ -1.45
CLK3-217ENST00000566126 TAX1BP3O14907 124 aa5.97□□□□□ -1.45
CLK3-217ENST00000566126 KRTAP9-9Q9BYP9 154 aa5.97□□□□□ -1.45
CLK3-217ENST00000566126 KRTAP9-4Q9BYQ2 154 aa5.97□□□□□ -1.45
CLK3-217ENST00000566126 AHNAKQ09666 5890 aaKnown RBP5.96□□□□□ -1.46
CLK3-217ENST00000566126 A0A1W2PPM0 123 aa5.95□□□□□ -1.46
CLK3-217ENST00000566126 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
CLK3-217ENST00000566126 C20orf197Q8N268 126 aa5.92□□□□□ -1.46
CLK3-217ENST00000566126 H3BT86 120 aa5.91□□□□□ -1.46
CLK3-217ENST00000566126 COL5A1-AS1Q5SY13 56 aa5.89□□□□□ -1.47
CLK3-217ENST00000566126 TP53AIP1Q9HCN2 124 aa5.88□□□□□ -1.47
CLK3-217ENST00000566126 SPCS1Q9Y6A9 102 aa5.86□□□□□ -1.47
CLK3-217ENST00000566126 MUC5ACP98088 5654 aa5.86□□□□□ -1.47
CLK3-217ENST00000566126 MUC5BQ9HC84 5762 aaPredicted RBP5.84□□□□□ -1.48
CLK3-217ENST00000566126 KRTAP19-5Q3LI72 72 aa5.81□□□□□ -1.48
CLK3-217ENST00000566126 PRO0461Q9UI25 63 aa5.8□□□□□ -1.48
CLK3-217ENST00000566126 PCP4L1A6NKN8 68 aa5.79□□□□□ -1.48
CLK3-217ENST00000566126 ACYP1P07311 99 aa5.79□□□□□ -1.48
CLK3-217ENST00000566126 MT1LQ93083 61 aa5.78□□□□□ -1.48
CLK3-217ENST00000566126 LOC101927531A0A1B0GV80 90 aa5.76□□□□□ -1.49
CLK3-217ENST00000566126 GTF2H5Q6ZYL4 71 aa5.76□□□□□ -1.49
CLK3-217ENST00000566126 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
CLK3-217ENST00000566126 TRAV22A0A0B4J277 110 aa5.74□□□□□ -1.49
CLK3-217ENST00000566126 F8W1H4 67 aa5.71□□□□□ -1.5
CLK3-217ENST00000566126 MT-ATP8P03928 68 aa5.71□□□□□ -1.5
CLK3-217ENST00000566126 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
CLK3-217ENST00000566126 ETDBQ3ZM63 59 aa5.64□□□□□ -1.51
CLK3-217ENST00000566126 UBL5Q9BZL1 73 aa5.63□□□□□ -1.51
CLK3-217ENST00000566126 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
CLK3-217ENST00000566126 KRTAP5-5Q701N2 237 aaPredicted RBP5.61□□□□□ -1.51
CLK3-217ENST00000566126 KRTAP5-8O75690 187 aa5.6□□□□□ -1.51
CLK3-217ENST00000566126 A0A0D9SG42 100 aa5.59□□□□□ -1.51
CLK3-217ENST00000566126 FAM240AA0A1B0GVK7 77 aa5.56□□□□□ -1.52
CLK3-217ENST00000566126 SYNE1Q8NF91 8797 aaKnown RBP5.55□□□□□ -1.52
CLK3-217ENST00000566126 CAMK2N1Q7Z7J9 78 aa5.53□□□□□ -1.52
CLK3-217ENST00000566126 A0A1B0GV90 55 aa5.51□□□□□ -1.53
CLK3-217ENST00000566126 KRTAP4-2Q9BYR5 136 aa5.5□□□□□ -1.53
CLK3-217ENST00000566126 ATP5EP2Q5VTU8 51 aa5.48□□□□□ -1.53
CLK3-217ENST00000566126 H0Y9P7 68 aa5.46□□□□□ -1.54
CLK3-217ENST00000566126 ATOX1O00244 68 aa5.42□□□□□ -1.54
CLK3-217ENST00000566126 LINC00643Q86TS7 51 aa5.41□□□□□ -1.54
CLK3-217ENST00000566126 J3QR89 54 aa5.37□□□□□ -1.55
CLK3-217ENST00000566126 UQCRQO14949 82 aa5.36□□□□□ -1.55
CLK3-217ENST00000566126 HIST1H4AP62805 103 aaKnown RBP5.34□□□□□ -1.55
CLK3-217ENST00000566126 KRTAP5-2Q701N4 177 aa5.33□□□□□ -1.56
CLK3-217ENST00000566126 C10orf95Q9H7T3 257 aa5.31□□□□□ -1.56
CLK3-217ENST00000566126 KRTAP13-4Q3LI77 160 aa5.3□□□□□ -1.56
CLK3-217ENST00000566126 LINC00208Q96KT6 92 aa5.29□□□□□ -1.56
CLK3-217ENST00000566126 OBSCNQ5VST9 7968 aa5.29□□□□□ -1.56
CLK3-217ENST00000566126 DMAC1Q96GE9 116 aa5.27□□□□□ -1.57
CLK3-217ENST00000566126 OCR1Q9BZK8 76 aa5.25□□□□□ -1.57
CLK3-217ENST00000566126 K7ERU9 68 aa5.23□□□□□ -1.57
CLK3-217ENST00000566126 LCE3AQ5TA76 89 aa5.21□□□□□ -1.58
CLK3-217ENST00000566126 H3BPC8 53 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms