RNA–Protein interactions for RNA: ENST00000564850.1

RBFOX1-216, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-216ENST00000564850 HECTD4Q9Y4D8 3996 aa0.7□□□□□ -2.3
RBFOX1-216ENST00000564850 ZANQ9Y493 2812 aa0.7□□□□□ -2.3
RBFOX1-216ENST00000564850 SPG11Q96JI7 2443 aa0.69□□□□□ -2.3
RBFOX1-216ENST00000564850 CEP250Q9BV73 2442 aa0.69□□□□□ -2.3
RBFOX1-216ENST00000564850 ANK3Q12955 4377 aaKnown RBP0.69□□□□□ -2.3
RBFOX1-216ENST00000564850 CACNA1AO00555 2505 aa0.69□□□□□ -2.3
RBFOX1-216ENST00000564850 DMXL2Q8TDJ6 3036 aa0.68□□□□□ -2.3
RBFOX1-216ENST00000564850 HSPG2P98160 4391 aa0.68□□□□□ -2.3
RBFOX1-216ENST00000564850 HRNRQ86YZ3 2850 aaPredicted RBP0.68□□□□□ -2.3
RBFOX1-216ENST00000564850 DNAH2Q9P225 4427 aa0.67□□□□□ -2.3
RBFOX1-216ENST00000564850 SMR3BP02814 79 aaPredicted RBP0.67□□□□□ -2.3
RBFOX1-216ENST00000564850 SPRR2AP35326 72 aa0.67□□□□□ -2.3
RBFOX1-216ENST00000564850 FLGP20930 4061 aaPredicted RBP0.67□□□□□ -2.3
RBFOX1-216ENST00000564850 AKAP9Q99996 3911 aa0.67□□□□□ -2.3
RBFOX1-216ENST00000564850 PKD1P98161 4303 aa0.66□□□□□ -2.3
RBFOX1-216ENST00000564850 CSMD1Q96PZ7 3565 aa0.66□□□□□ -2.3
RBFOX1-216ENST00000564850 LRBAP50851 2863 aa0.65□□□□□ -2.31
RBFOX1-216ENST00000564850 ATMQ13315 3056 aa0.65□□□□□ -2.31
RBFOX1-216ENST00000564850 HTTP42858 3142 aa0.65□□□□□ -2.31
RBFOX1-216ENST00000564850 WDR87Q6ZQQ6 2873 aa0.65□□□□□ -2.31
RBFOX1-216ENST00000564850 TRIOO75962 3097 aa0.65□□□□□ -2.31
RBFOX1-216ENST00000564850 TLN2Q9Y4G6 2542 aa0.65□□□□□ -2.31
RBFOX1-216ENST00000564850 MYO18BQ8IUG5 2567 aa0.64□□□□□ -2.31
RBFOX1-216ENST00000564850 DNAH7Q8WXX0 4024 aa0.64□□□□□ -2.31
RBFOX1-216ENST00000564850 KRTAP6-2Q3LI66 62 aa0.64□□□□□ -2.31
RBFOX1-216ENST00000564850 ITPR1Q14643 2758 aa0.64□□□□□ -2.31
RBFOX1-216ENST00000564850 LRP1Q07954 4544 aaKnown RBP0.64□□□□□ -2.31
RBFOX1-216ENST00000564850 FRYLO94915 3013 aa0.64□□□□□ -2.31
RBFOX1-216ENST00000564850 SYNE1Q8NF91 8797 aaKnown RBP0.64□□□□□ -2.31
RBFOX1-216ENST00000564850 TEP1Q99973 2627 aaKnown RBP0.64□□□□□ -2.31
RBFOX1-216ENST00000564850 SMG1Q96Q15 3661 aaKnown RBP0.63□□□□□ -2.31
RBFOX1-216ENST00000564850 FASNP49327 2511 aaKnown RBP0.63□□□□□ -2.31
RBFOX1-216ENST00000564850 USP9XQ93008 2570 aaPredicted RBP0.63□□□□□ -2.31
RBFOX1-216ENST00000564850 PRUNE2Q8WUY3 3088 aa0.63□□□□□ -2.31
RBFOX1-216ENST00000564850 ADGRG4Q8IZF6 3080 aa0.62□□□□□ -2.31
RBFOX1-216ENST00000564850 DEFB133Q30KQ1 61 aa0.62□□□□□ -2.31
RBFOX1-216ENST00000564850 KRTAP19-5Q3LI72 72 aa0.62□□□□□ -2.31
RBFOX1-216ENST00000564850 LPAP08519 4548 aa0.62□□□□□ -2.31
RBFOX1-216ENST00000564850 C5orf42Q9H799 3197 aa0.61□□□□□ -2.31
RBFOX1-216ENST00000564850 DNAH6Q9C0G6 4158 aa0.61□□□□□ -2.31
RBFOX1-216ENST00000564850 MXRA5Q9NR99 2828 aa0.61□□□□□ -2.31
RBFOX1-216ENST00000564850 DNAH12Q6ZR08 3092 aa0.61□□□□□ -2.31
RBFOX1-216ENST00000564850 TGP01266 2768 aa0.61□□□□□ -2.31
RBFOX1-216ENST00000564850 STATHP02808 62 aa0.61□□□□□ -2.31
RBFOX1-216ENST00000564850 IGSF10Q6WRI0 2623 aa0.6□□□□□ -2.31
RBFOX1-216ENST00000564850 LAMA3Q16787 3333 aa0.6□□□□□ -2.31
RBFOX1-216ENST00000564850 SVEP1Q4LDE5 3571 aa0.6□□□□□ -2.31
RBFOX1-216ENST00000564850 DNAH9Q9NYC9 4486 aa0.6□□□□□ -2.31
RBFOX1-216ENST00000564850 NIPBLQ6KC79 2804 aaeCLIP0.58□□□□□ -2.32
RBFOX1-216ENST00000564850 SPRR2EP22531 72 aa0.58□□□□□ -2.32
RBFOX1-216ENST00000564850 RPS29P62273 56 aaKnown RBP0.58□□□□□ -2.32
RBFOX1-216ENST00000564850 SPRR2FQ96RM1 72 aa0.58□□□□□ -2.32
RBFOX1-216ENST00000564850 Q9Y3F1 56 aa0.58□□□□□ -2.32
RBFOX1-216ENST00000564850 APOBP04114 4563 aaKnown RBP0.58□□□□□ -2.32
RBFOX1-216ENST00000564850 TEX15Q9BXT5 2789 aa0.57□□□□□ -2.32
RBFOX1-216ENST00000564850 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
RBFOX1-216ENST00000564850 COL6A3P12111 3177 aa0.57□□□□□ -2.32
RBFOX1-216ENST00000564850 SZT2Q5T011 3432 aa0.57□□□□□ -2.32
RBFOX1-216ENST00000564850 LAMA1P25391 3075 aa0.56□□□□□ -2.32
RBFOX1-216ENST00000564850 MAST4O15021 2626 aa0.56□□□□□ -2.32
RBFOX1-216ENST00000564850 FAT3Q8TDW7 4589 aa0.56□□□□□ -2.32
RBFOX1-216ENST00000564850 DNAH10Q8IVF4 4471 aa0.56□□□□□ -2.32
RBFOX1-216ENST00000564850 MGAM2Q2M2H8 2515 aa0.56□□□□□ -2.32
RBFOX1-216ENST00000564850 DEFB108BQ8NET1 73 aa0.56□□□□□ -2.32
RBFOX1-216ENST00000564850 FLNAP21333 2647 aaKnown RBP0.55□□□□□ -2.32
RBFOX1-216ENST00000564850 MKI67P46013 3256 aaKnown RBP0.55□□□□□ -2.32
RBFOX1-216ENST00000564850 A0A096LPF7 62 aa0.54□□□□□ -2.32
RBFOX1-216ENST00000564850 LINC01556Q5JQF7 62 aa0.54□□□□□ -2.32
RBFOX1-216ENST00000564850 COX14Q96I36 57 aa0.54□□□□□ -2.32
RBFOX1-216ENST00000564850 DNAH1Q9P2D7 4330 aa0.54□□□□□ -2.32
RBFOX1-216ENST00000564850 CFAP46Q8IYW2 2715 aa0.54□□□□□ -2.32
RBFOX1-216ENST00000564850 FAT1Q14517 4588 aa0.54□□□□□ -2.32
RBFOX1-216ENST00000564850 MAP1AP78559 2803 aaPredicted RBP0.53□□□□□ -2.32
RBFOX1-216ENST00000564850 CD52P31358 61 aa0.53□□□□□ -2.32
RBFOX1-216ENST00000564850 PKHD1P08F94 4074 aa0.53□□□□□ -2.33
RBFOX1-216ENST00000564850 DMDP11532 3685 aa0.52□□□□□ -2.33
RBFOX1-216ENST00000564850 ITPR2Q14571 2701 aa0.51□□□□□ -2.33
RBFOX1-216ENST00000564850 GPR98Q8WXG9 6306 aa0.51□□□□□ -2.33
RBFOX1-216ENST00000564850 DOPEY1Q5JWR5 2465 aa0.51□□□□□ -2.33
RBFOX1-216ENST00000564850 NBEAL1Q6ZS30 2694 aa0.51□□□□□ -2.33
RBFOX1-216ENST00000564850 CSMD2Q7Z408 3487 aa0.51□□□□□ -2.33
RBFOX1-216ENST00000564850 LRP1BQ9NZR2 4599 aa0.51□□□□□ -2.33
RBFOX1-216ENST00000564850 AHNAKQ09666 5890 aaKnown RBP0.51□□□□□ -2.33
RBFOX1-216ENST00000564850 CMYA5Q8N3K9 4069 aa0.5□□□□□ -2.33
RBFOX1-216ENST00000564850 SPTAN1Q13813 2472 aaKnown RBP0.5□□□□□ -2.33
RBFOX1-216ENST00000564850 PLECQ15149 4684 aaKnown RBP0.49□□□□□ -2.33
RBFOX1-216ENST00000564850 FREM2Q5SZK8 3169 aa0.49□□□□□ -2.33
RBFOX1-216ENST00000564850 XIRP2A4UGR9 3374 aa0.48□□□□□ -2.33
RBFOX1-216ENST00000564850 DCHS1Q96JQ0 3298 aa0.48□□□□□ -2.33
RBFOX1-216ENST00000564850 BOD1L1Q8NFC6 3051 aa0.48□□□□□ -2.33
RBFOX1-216ENST00000564850 MUC3AQ02505 3323 aa0.48□□□□□ -2.33
RBFOX1-216ENST00000564850 TRRAPQ9Y4A5 3859 aa0.47□□□□□ -2.33
RBFOX1-216ENST00000564850 HMCN2Q8NDA2 5059 aa0.46□□□□□ -2.34
RBFOX1-216ENST00000564850 MT1EP04732 61 aa0.46□□□□□ -2.34
RBFOX1-216ENST00000564850 VPS13CQ709C8 3753 aa0.46□□□□□ -2.34
RBFOX1-216ENST00000564850 MT1HP80294 61 aa0.45□□□□□ -2.34
RBFOX1-216ENST00000564850 FAT4Q6V0I7 4981 aa0.45□□□□□ -2.34
RBFOX1-216ENST00000564850 STAB2Q8WWQ8 2551 aa0.44□□□□□ -2.34
RBFOX1-216ENST00000564850 SRCAPQ6ZRS2 3230 aa0.43□□□□□ -2.34
RBFOX1-216ENST00000564850 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms