RNA–Protein interactions for RNA: ENST00000562948.1

SCAPER-205, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-205ENST00000562948 IGLV9-49A0A0B4J1Y8 123 aa4.11□□□□□ -1.75
SCAPER-205ENST00000562948 Q96NJ1 140 aa4.11□□□□□ -1.75
SCAPER-205ENST00000562948 Q8N1X5 172 aa4.11□□□□□ -1.75
SCAPER-205ENST00000562948 Q5W150 140 aa4.1□□□□□ -1.75
SCAPER-205ENST00000562948 FAT4Q6V0I7 4981 aa4.09□□□□□ -1.75
SCAPER-205ENST00000562948 NOTCH2NLQ7Z3S9 236 aa4.09□□□□□ -1.75
SCAPER-205ENST00000562948 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
SCAPER-205ENST00000562948 SPINK6Q6UWN8 80 aa4.07□□□□□ -1.76
SCAPER-205ENST00000562948 KRTAP10-8P60410 259 aa4.05□□□□□ -1.76
SCAPER-205ENST00000562948 A8MUU9 505 aa4.04□□□□□ -1.76
SCAPER-205ENST00000562948 KRTAP13-3Q3SY46 172 aa4.04□□□□□ -1.76
SCAPER-205ENST00000562948 P0C880 135 aa4.03□□□□□ -1.76
SCAPER-205ENST00000562948 SPINK1P00995 79 aa4.02□□□□□ -1.77
SCAPER-205ENST00000562948 LINC00304Q8N9R0 145 aa4.02□□□□□ -1.77
SCAPER-205ENST00000562948 CRIPTQ9P021 101 aa4.02□□□□□ -1.77
SCAPER-205ENST00000562948 FAM229AH3BQW9 127 aa4.01□□□□□ -1.77
SCAPER-205ENST00000562948 LCE2DQ5TA82 110 aaPredicted RBP4.01□□□□□ -1.77
SCAPER-205ENST00000562948 J3QL48 77 aa4□□□□□ -1.77
SCAPER-205ENST00000562948 SSBP3-AS1Q7Z2R9 100 aa4□□□□□ -1.77
SCAPER-205ENST00000562948 IGKV2-30P06310 120 aa3.99□□□□□ -1.77
SCAPER-205ENST00000562948 SPINT4Q6UDR6 99 aa3.99□□□□□ -1.77
SCAPER-205ENST00000562948 IGKV2D-30A0A075B6S6 120 aa3.98□□□□□ -1.77
SCAPER-205ENST00000562948 K7ERS5 55 aa3.97□□□□□ -1.77
SCAPER-205ENST00000562948 TYMSOSQ8TAI1 123 aa3.96□□□□□ -1.78
SCAPER-205ENST00000562948 H0YAA0 97 aa3.96□□□□□ -1.78
SCAPER-205ENST00000562948 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
SCAPER-205ENST00000562948 KRTAP16-1A8MUX0 517 aa3.93□□□□□ -1.78
SCAPER-205ENST00000562948 A0A1B0GU33 70 aa3.92□□□□□ -1.78
SCAPER-205ENST00000562948 C20orf166-AS1Q96NR2 134 aa3.92□□□□□ -1.78
SCAPER-205ENST00000562948 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
SCAPER-205ENST00000562948 H1FX-AS1Q4G0G2 97 aa3.86□□□□□ -1.79
SCAPER-205ENST00000562948 RPS29P62273 56 aaKnown RBP3.84□□□□□ -1.8
SCAPER-205ENST00000562948 C9orf92A6NGG3 77 aa3.83□□□□□ -1.8
SCAPER-205ENST00000562948 KRTAP4-1Q9BYQ7 146 aa3.82□□□□□ -1.8
SCAPER-205ENST00000562948 KRTAP15-1Q3LI76 137 aa3.8□□□□□ -1.8
SCAPER-205ENST00000562948 TPRXLQ17RH7 258 aa3.79□□□□□ -1.8
SCAPER-205ENST00000562948 XP32Q5T750 250 aa3.79□□□□□ -1.8
SCAPER-205ENST00000562948 LUZP6Q538Z0 58 aa3.78□□□□□ -1.8
SCAPER-205ENST00000562948 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
SCAPER-205ENST00000562948 COX6B2Q6YFQ2 88 aa3.77□□□□□ -1.81
SCAPER-205ENST00000562948 RPL37P61927 97 aaKnown RBP3.76□□□□□ -1.81
SCAPER-205ENST00000562948 KRTAP3-3Q9BYR6 98 aa3.75□□□□□ -1.81
SCAPER-205ENST00000562948 KRTAP3-2Q9BYR7 98 aa3.75□□□□□ -1.81
SCAPER-205ENST00000562948 A0A0D9SG42 100 aa3.73□□□□□ -1.81
SCAPER-205ENST00000562948 KRTAP19-2Q3LHN2 52 aa3.72□□□□□ -1.81
SCAPER-205ENST00000562948 KRTAP3-1Q9BYR8 98 aa3.66□□□□□ -1.82
SCAPER-205ENST00000562948 LCE2CQ5TA81 110 aa3.63□□□□□ -1.83
SCAPER-205ENST00000562948 USH2AO75445 5202 aa3.63□□□□□ -1.83
SCAPER-205ENST00000562948 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
SCAPER-205ENST00000562948 S4R3F8 94 aa3.6□□□□□ -1.83
SCAPER-205ENST00000562948 KRTAP10-6P60371 365 aaPredicted RBP3.58□□□□□ -1.84
SCAPER-205ENST00000562948 SEC61BP60468 96 aaKnown RBP3.55□□□□□ -1.84
SCAPER-205ENST00000562948 FSIP2Q5CZC0 6907 aa3.55□□□□□ -1.84
SCAPER-205ENST00000562948 KRTAP12-2P59991 146 aa3.54□□□□□ -1.84
SCAPER-205ENST00000562948 PLAC4Q8WY50 150 aa3.52□□□□□ -1.85
SCAPER-205ENST00000562948 LCE2AQ5TA79 106 aaPredicted RBP3.52□□□□□ -1.85
SCAPER-205ENST00000562948 KRTAP12-1P59990 96 aa3.49□□□□□ -1.85
SCAPER-205ENST00000562948 LCE2BO14633 110 aa3.48□□□□□ -1.85
SCAPER-205ENST00000562948 MT1HP80294 61 aa3.47□□□□□ -1.85
SCAPER-205ENST00000562948 M0QZ58 72 aa3.38□□□□□ -1.87
SCAPER-205ENST00000562948 LORP23490 312 aaPredicted RBP3.38□□□□□ -1.87
SCAPER-205ENST00000562948 KRTAP9-8Q9BYQ0 159 aa3.38□□□□□ -1.87
SCAPER-205ENST00000562948 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
SCAPER-205ENST00000562948 CAMK2N1Q7Z7J9 78 aa3.36□□□□□ -1.87
SCAPER-205ENST00000562948 MT1FP04733 61 aa3.32□□□□□ -1.88
SCAPER-205ENST00000562948 KMT2DO14686 5537 aa3.32□□□□□ -1.88
SCAPER-205ENST00000562948 MT2AP02795 61 aa3.3□□□□□ -1.88
SCAPER-205ENST00000562948 PP632Q6XCG6 107 aa3.28□□□□□ -1.88
SCAPER-205ENST00000562948 R4GN34 69 aa3.28□□□□□ -1.88
SCAPER-205ENST00000562948 PRO2289Q9P1D8 64 aa3.25□□□□□ -1.89
SCAPER-205ENST00000562948 KRTAP19-1Q8IUB9 90 aa3.24□□□□□ -1.89
SCAPER-205ENST00000562948 KRTAP9-3Q9BYQ3 159 aa3.24□□□□□ -1.89
SCAPER-205ENST00000562948 M0R2T5 61 aa3.2□□□□□ -1.9
SCAPER-205ENST00000562948 FCGBPQ9Y6R7 5405 aaPredicted RBP3.18□□□□□ -1.9
SCAPER-205ENST00000562948 KRTAP10-10P60014 251 aa3.14□□□□□ -1.91
SCAPER-205ENST00000562948 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
SCAPER-205ENST00000562948 MT1BP07438 61 aa3.12□□□□□ -1.91
SCAPER-205ENST00000562948 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
SCAPER-205ENST00000562948 MACF1Q9UPN3 7388 aaKnown RBP3.12□□□□□ -1.91
SCAPER-205ENST00000562948 INE1O15225 51 aa3.11□□□□□ -1.91
SCAPER-205ENST00000562948 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
SCAPER-205ENST00000562948 TNP1P09430 55 aa3.07□□□□□ -1.92
SCAPER-205ENST00000562948 KRTAP19-8Q3LI54 63 aa3.05□□□□□ -1.92
SCAPER-205ENST00000562948 KRTAP9-2Q9BYQ4 174 aa3.04□□□□□ -1.92
SCAPER-205ENST00000562948 MUC12Q9UKN1 5478 aa3.02□□□□□ -1.93
SCAPER-205ENST00000562948 KRTAP23-1A1A580 65 aa3.01□□□□□ -1.93
SCAPER-205ENST00000562948 KRTAP10-5P60370 271 aa3□□□□□ -1.93
SCAPER-205ENST00000562948 MT1XP80297 61 aa3□□□□□ -1.93
SCAPER-205ENST00000562948 LOC100996750A0A140TA64 210 aa3□□□□□ -1.93
SCAPER-205ENST00000562948 KRTAP4-6Q9BYQ5 205 aa3□□□□□ -1.93
SCAPER-205ENST00000562948 MDN1Q9NU22 5596 aa2.99□□□□□ -1.93
SCAPER-205ENST00000562948 KRTAP10-7P60409 375 aaPredicted RBP2.91□□□□□ -1.94
SCAPER-205ENST00000562948 KRTAP19-6Q3LI70 58 aa2.91□□□□□ -1.94
SCAPER-205ENST00000562948 KRTAP4-8A0A0G2JLE6 195 aa2.87□□□□□ -1.95
SCAPER-205ENST00000562948 KRTAP4-8Q9BYQ9 185 aa2.87□□□□□ -1.95
SCAPER-205ENST00000562948 CRCT1Q9UGL9 99 aa2.85□□□□□ -1.95
SCAPER-205ENST00000562948 DSTQ03001 7570 aaKnown RBP2.83□□□□□ -1.96
SCAPER-205ENST00000562948 LCE3AQ5TA76 89 aa2.82□□□□□ -1.96
SCAPER-205ENST00000562948 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
SCAPER-205ENST00000562948 KRTAP9-6A0A140TA67 174 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms