RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 MT1BP07438 61 aa-0.67□□□□□ -2.52
CHD9-204ENST00000561869 DEFB114Q30KQ6 69 aa-0.67□□□□□ -2.52
CHD9-204ENST00000561869 DIP2AQ14689 1571 aa-0.67□□□□□ -2.52
CHD9-204ENST00000561869 CDC42BPGQ6DT37 1551 aa-0.67□□□□□ -2.52
CHD9-204ENST00000561869 CLPSL2Q6UWE3 100 aa-0.68□□□□□ -2.52
CHD9-204ENST00000561869 UNC80Q8N2C7 3258 aa-0.68□□□□□ -2.52
CHD9-204ENST00000561869 CFAP54Q96N23 3096 aa-0.68□□□□□ -2.52
CHD9-204ENST00000561869 CDC42BPAQ5VT25 1732 aa-0.69□□□□□ -2.52
CHD9-204ENST00000561869 NCBP2-AS2Q69YL0 99 aa-0.69□□□□□ -2.52
CHD9-204ENST00000561869 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.69□□□□□ -2.52
CHD9-204ENST00000561869 BOD1L1Q8NFC6 3051 aa-0.7□□□□□ -2.52
CHD9-204ENST00000561869 IGLV5-48A0A075B6I7 105 aa-0.7□□□□□ -2.52
CHD9-204ENST00000561869 H3BVH4 76 aa-0.7□□□□□ -2.52
CHD9-204ENST00000561869 TNP1P09430 55 aa-0.7□□□□□ -2.52
CHD9-204ENST00000561869 MINOS1Q5TGZ0 78 aa-0.7□□□□□ -2.52
CHD9-204ENST00000561869 C3P01024 1663 aa-0.7□□□□□ -2.52
CHD9-204ENST00000561869 WDFY3Q8IZQ1 3526 aa-0.7□□□□□ -2.52
CHD9-204ENST00000561869 ZFHX4Q86UP3 3567 aa-0.7□□□□□ -2.52
CHD9-204ENST00000561869 FREM2Q5SZK8 3169 aa-0.7□□□□□ -2.52
CHD9-204ENST00000561869 PRUNE2Q8WUY3 3088 aa-0.7□□□□□ -2.52
CHD9-204ENST00000561869 CRYBG3Q68DQ2 2970 aa-0.71□□□□□ -2.52
CHD9-204ENST00000561869 MYO5CQ9NQX4 1742 aa-0.71□□□□□ -2.52
CHD9-204ENST00000561869 MMP24-AS1A0A0U1RRL7 71 aa-0.71□□□□□ -2.52
CHD9-204ENST00000561869 DEFB4AO15263 64 aa-0.71□□□□□ -2.52
CHD9-204ENST00000561869 SPTAN1Q13813 2472 aaKnown RBP-0.71□□□□□ -2.52
CHD9-204ENST00000561869 VPS13CQ709C8 3753 aa-0.71□□□□□ -2.52
CHD9-204ENST00000561869 IQGAP3Q86VI3 1631 aa-0.71□□□□□ -2.52
CHD9-204ENST00000561869 ABCC6O95255 1503 aa-0.72□□□□□ -2.52
CHD9-204ENST00000561869 ATXN8Q156A1 80 aa-0.72□□□□□ -2.52
CHD9-204ENST00000561869 MAST1Q9Y2H9 1570 aa-0.72□□□□□ -2.52
CHD9-204ENST00000561869 SCRIBQ14160 1630 aa-0.72□□□□□ -2.52
CHD9-204ENST00000561869 SZT2Q5T011 3432 aa-0.73□□□□□ -2.53
CHD9-204ENST00000561869 CLASP1Q7Z460 1538 aa-0.73□□□□□ -2.53
CHD9-204ENST00000561869 SPEGQ15772 3267 aa-0.73□□□□□ -2.53
CHD9-204ENST00000561869 ABCA9Q8IUA7 1624 aa-0.73□□□□□ -2.53
CHD9-204ENST00000561869 SFTA3P0C7M3 94 aa-0.73□□□□□ -2.53
CHD9-204ENST00000561869 C6orf48Q9UBA6 75 aa-0.73□□□□□ -2.53
CHD9-204ENST00000561869 ASXL1Q8IXJ9 1541 aa-0.74□□□□□ -2.53
CHD9-204ENST00000561869 UGGT2Q9NYU1 1516 aa-0.74□□□□□ -2.53
CHD9-204ENST00000561869 DNMBPQ6XZF7 1577 aa-0.74□□□□□ -2.53
CHD9-204ENST00000561869 EP400Q96L91 3159 aa-0.74□□□□□ -2.53
CHD9-204ENST00000561869 H3BUA1 57 aa-0.74□□□□□ -2.53
CHD9-204ENST00000561869 PCNTO95613 3336 aa-0.74□□□□□ -2.53
CHD9-204ENST00000561869 DUOX2Q9NRD8 1548 aa-0.74□□□□□ -2.53
CHD9-204ENST00000561869 MROH1Q8NDA8 1641 aa-0.75□□□□□ -2.53
CHD9-204ENST00000561869 LY75O60449 1722 aa-0.75□□□□□ -2.53
CHD9-204ENST00000561869 HILPDAQ9Y5L2 63 aa-0.75□□□□□ -2.53
CHD9-204ENST00000561869 FRYLO94915 3013 aa-0.76□□□□□ -2.53
CHD9-204ENST00000561869 A8MTW9 85 aa-0.76□□□□□ -2.53
CHD9-204ENST00000561869 NOP10Q9NPE3 64 aaKnown RBP-0.76□□□□□ -2.53
CHD9-204ENST00000561869 LOC400499M0QZD8 3231 aa-0.77□□□□□ -2.53
CHD9-204ENST00000561869 FCER1GP30273 86 aa-0.77□□□□□ -2.53
CHD9-204ENST00000561869 DMDP11532 3685 aa-0.77□□□□□ -2.53
CHD9-204ENST00000561869 CENPEQ02224 2701 aa-0.78□□□□□ -2.53
CHD9-204ENST00000561869 LINC01546A6NGU7 62 aa-0.78□□□□□ -2.53
CHD9-204ENST00000561869 MT1FP04733 61 aa-0.78□□□□□ -2.53
CHD9-204ENST00000561869 SMCO4Q9NRQ5 59 aa-0.78□□□□□ -2.53
CHD9-204ENST00000561869 MADDQ8WXG6 1647 aa-0.78□□□□□ -2.54
CHD9-204ENST00000561869 TIAM1Q13009 1591 aa-0.79□□□□□ -2.54
CHD9-204ENST00000561869 M0QZ58 72 aa-0.79□□□□□ -2.54
CHD9-204ENST00000561869 SPART-AS1P0CW21 52 aa-0.79□□□□□ -2.54
CHD9-204ENST00000561869 CEP350Q5VT06 3117 aa-0.79□□□□□ -2.54
CHD9-204ENST00000561869 M0QY20 66 aa-0.8□□□□□ -2.54
CHD9-204ENST00000561869 PDCD5O14737 125 aa-0.8□□□□□ -2.54
CHD9-204ENST00000561869 CROCC2H7BZ55 1655 aa-0.81□□□□□ -2.54
CHD9-204ENST00000561869 MUC3AQ02505 3323 aa-0.81□□□□□ -2.54
CHD9-204ENST00000561869 K7EMI3 77 aa-0.81□□□□□ -2.54
CHD9-204ENST00000561869 GNG13Q9P2W3 67 aa-0.81□□□□□ -2.54
CHD9-204ENST00000561869 A0A1B0GUL6 1792 aa-0.82□□□□□ -2.54
CHD9-204ENST00000561869 LINC01549A6NIU2 74 aa-0.82□□□□□ -2.54
CHD9-204ENST00000561869 LEAP2Q969E1 77 aa-0.82□□□□□ -2.54
CHD9-204ENST00000561869 KAAG1Q9UBP8 84 aa-0.82□□□□□ -2.54
CHD9-204ENST00000561869 GLI2P10070 1586 aa-0.83□□□□□ -2.54
CHD9-204ENST00000561869 DNAH14Q0VDD8 3507 aa-0.83□□□□□ -2.54
CHD9-204ENST00000561869 RPS29P62273 56 aaKnown RBP-0.83□□□□□ -2.54
CHD9-204ENST00000561869 DEFB136Q30KP8 78 aa-0.83□□□□□ -2.54
CHD9-204ENST00000561869 KIF21BO75037 1637 aa-0.83□□□□□ -2.54
CHD9-204ENST00000561869 ABCA6Q8N139 1617 aa-0.85□□□□□ -2.55
CHD9-204ENST00000561869 CFAP47Q6ZTR5 3102 aa-0.86□□□□□ -2.55
CHD9-204ENST00000561869 EFCAB5A4FU69 1503 aa-0.86□□□□□ -2.55
CHD9-204ENST00000561869 M0R1W7 72 aa-0.87□□□□□ -2.55
CHD9-204ENST00000561869 POLR2KP53803 58 aaKnown RBP-0.87□□□□□ -2.55
CHD9-204ENST00000561869 WFDC10BQ8IUB3 73 aa-0.87□□□□□ -2.55
CHD9-204ENST00000561869 MKI67P46013 3256 aaKnown RBP-0.87□□□□□ -2.55
CHD9-204ENST00000561869 ALS2Q96Q42 1657 aa-0.88□□□□□ -2.55
CHD9-204ENST00000561869 USP34Q70CQ2 3546 aa-0.89□□□□□ -2.55
CHD9-204ENST00000561869 IGIPA6NJ69 53 aa-0.89□□□□□ -2.55
CHD9-204ENST00000561869 SERF2P84101 59 aa-0.89□□□□□ -2.55
CHD9-204ENST00000561869 LINC00308Q8TCZ7 52 aa-0.89□□□□□ -2.55
CHD9-204ENST00000561869 TMEM167BQ9NRX6 74 aa-0.89□□□□□ -2.55
CHD9-204ENST00000561869 FAM208AQ9UK61 1670 aaKnown RBP-0.89□□□□□ -2.55
CHD9-204ENST00000561869 SMIM27A0A1W2PRY6 76 aa-0.9□□□□□ -2.55
CHD9-204ENST00000561869 ABRACLQ9P1F3 81 aa-0.9□□□□□ -2.55
CHD9-204ENST00000561869 PREX2Q70Z35 1606 aa-0.9□□□□□ -2.55
CHD9-204ENST00000561869 EEA1Q15075 1411 aa-0.9□□□□□ -2.55
CHD9-204ENST00000561869 NMES1Q9C002 83 aa-0.91□□□□□ -2.56
CHD9-204ENST00000561869 VCANP13611 3396 aa-0.91□□□□□ -2.56
CHD9-204ENST00000561869 DNAH12Q6ZR08 3092 aa-0.91□□□□□ -2.56
CHD9-204ENST00000561869 XIRP2A4UGR9 3374 aa-0.92□□□□□ -2.56
CHD9-204ENST00000561869 CCDC180Q9P1Z9 1646 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms