RNA–Protein interactions for RNA: ENST00000561397.1

AP4E1-206, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 1,233 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-206ENST00000561397 COX6B2Q6YFQ2 88 aa1.94□□□□□ -2.1
AP4E1-206ENST00000561397 RPL37P61927 97 aaKnown RBP1.93□□□□□ -2.1
AP4E1-206ENST00000561397 SPACA4Q8TDM5 124 aa1.93□□□□□ -2.1
AP4E1-206ENST00000561397 C10orf95Q9H7T3 257 aa1.93□□□□□ -2.1
AP4E1-206ENST00000561397 HELZ2Q9BYK8 2649 aaKnown RBP1.93□□□□□ -2.1
AP4E1-206ENST00000561397 HECTD1Q9ULT8 2610 aa1.93□□□□□ -2.1
AP4E1-206ENST00000561397 ABCA12Q86UK0 2595 aa1.93□□□□□ -2.1
AP4E1-206ENST00000561397 POLQO75417 2590 aa1.92□□□□□ -2.1
AP4E1-206ENST00000561397 TENM4Q6N022 2769 aa1.92□□□□□ -2.1
AP4E1-206ENST00000561397 FLNAP21333 2647 aaKnown RBP1.92□□□□□ -2.1
AP4E1-206ENST00000561397 TRRAPQ9Y4A5 3859 aa1.92□□□□□ -2.1
AP4E1-206ENST00000561397 ANK2Q01484 3957 aa1.92□□□□□ -2.1
AP4E1-206ENST00000561397 VWFP04275 2813 aa1.91□□□□□ -2.1
AP4E1-206ENST00000561397 TENM3Q9P273 2699 aa1.91□□□□□ -2.1
AP4E1-206ENST00000561397 VPS13DQ5THJ4 4388 aa1.9□□□□□ -2.11
AP4E1-206ENST00000561397 DNAH3Q8TD57 4116 aa1.89□□□□□ -2.11
AP4E1-206ENST00000561397 PRKDCP78527 4128 aaKnown RBP1.89□□□□□ -2.11
AP4E1-206ENST00000561397 PDZD2O15018 2839 aa1.88□□□□□ -2.11
AP4E1-206ENST00000561397 ZFHX2Q9C0A1 2572 aaPredicted RBP1.88□□□□□ -2.11
AP4E1-206ENST00000561397 NBEAL1Q6ZS30 2694 aa1.87□□□□□ -2.11
AP4E1-206ENST00000561397 FAM208BQ5VWN6 2430 aa1.87□□□□□ -2.11
AP4E1-206ENST00000561397 FLNCQ14315 2725 aa1.87□□□□□ -2.11
AP4E1-206ENST00000561397 KRTAP13-4Q3LI77 160 aa1.87□□□□□ -2.11
AP4E1-206ENST00000561397 S4R3F8 94 aa1.87□□□□□ -2.11
AP4E1-206ENST00000561397 CACNA1AO00555 2505 aa1.87□□□□□ -2.11
AP4E1-206ENST00000561397 COL6A5A8TX70 2615 aa1.87□□□□□ -2.11
AP4E1-206ENST00000561397 COL7A1Q02388 2944 aa1.86□□□□□ -2.11
AP4E1-206ENST00000561397 TGP01266 2768 aa1.86□□□□□ -2.11
AP4E1-206ENST00000561397 Q6ZRN7 208 aaPredicted RBP1.86□□□□□ -2.11
AP4E1-206ENST00000561397 UBE2DNLQ8IWF7 75 aa1.86□□□□□ -2.11
AP4E1-206ENST00000561397 DNAH7Q8WXX0 4024 aa1.86□□□□□ -2.11
AP4E1-206ENST00000561397 ACANP16112 2415 aa1.86□□□□□ -2.11
AP4E1-206ENST00000561397 FASNP49327 2511 aaKnown RBP1.85□□□□□ -2.11
AP4E1-206ENST00000561397 DNAH10Q8IVF4 4471 aa1.85□□□□□ -2.11
AP4E1-206ENST00000561397 A0A0D9SG42 100 aa1.85□□□□□ -2.11
AP4E1-206ENST00000561397 J3QKU1 62 aa1.85□□□□□ -2.11
AP4E1-206ENST00000561397 CUBNO60494 3623 aa1.85□□□□□ -2.11
AP4E1-206ENST00000561397 DNAH8Q96JB1 4490 aa1.85□□□□□ -2.11
AP4E1-206ENST00000561397 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.11
AP4E1-206ENST00000561397 DNAH6Q9C0G6 4158 aa1.84□□□□□ -2.12
AP4E1-206ENST00000561397 MYO18BQ8IUG5 2567 aa1.83□□□□□ -2.12
AP4E1-206ENST00000561397 APLNQ9ULZ1 77 aa1.83□□□□□ -2.12
AP4E1-206ENST00000561397 ITPR2Q14571 2701 aa1.82□□□□□ -2.12
AP4E1-206ENST00000561397 STAB2Q8WWQ8 2551 aa1.82□□□□□ -2.12
AP4E1-206ENST00000561397 KRTAP12-1P59990 96 aa1.82□□□□□ -2.12
AP4E1-206ENST00000561397 DYNC2H1Q8NCM8 4307 aaKnown RBP1.82□□□□□ -2.12
AP4E1-206ENST00000561397 MAST4O15021 2626 aa1.81□□□□□ -2.12
AP4E1-206ENST00000561397 CSMD3Q7Z407 3707 aa1.81□□□□□ -2.12
AP4E1-206ENST00000561397 PLAC4Q8WY50 150 aa1.81□□□□□ -2.12
AP4E1-206ENST00000561397 DNAH17Q9UFH2 4485 aa1.81□□□□□ -2.12
AP4E1-206ENST00000561397 TEP1Q99973 2627 aaKnown RBP1.81□□□□□ -2.12
AP4E1-206ENST00000561397 TENM1Q9UKZ4 2725 aa1.81□□□□□ -2.12
AP4E1-206ENST00000561397 DNAH9Q9NYC9 4486 aa1.8□□□□□ -2.12
AP4E1-206ENST00000561397 NOTCH1P46531 2555 aa1.8□□□□□ -2.12
AP4E1-206ENST00000561397 CMYA5Q8N3K9 4069 aa1.8□□□□□ -2.12
AP4E1-206ENST00000561397 IGSF10Q6WRI0 2623 aa1.8□□□□□ -2.12
AP4E1-206ENST00000561397 RPS29P62273 56 aaKnown RBP1.8□□□□□ -2.12
AP4E1-206ENST00000561397 ATRQ13535 2644 aa1.8□□□□□ -2.12
AP4E1-206ENST00000561397 LYSTQ99698 3801 aa1.8□□□□□ -2.12
AP4E1-206ENST00000561397 NSD1Q96L73 2696 aaPredicted RBP1.79□□□□□ -2.12
AP4E1-206ENST00000561397 ZNF469Q96JG9 3925 aaPredicted RBP1.79□□□□□ -2.12
AP4E1-206ENST00000561397 FLNBO75369 2602 aaKnown RBP1.79□□□□□ -2.12
AP4E1-206ENST00000561397 FBN3Q75N90 2809 aa1.79□□□□□ -2.12
AP4E1-206ENST00000561397 HECTD4Q9Y4D8 3996 aa1.78□□□□□ -2.12
AP4E1-206ENST00000561397 USP24Q9UPU5 2620 aa1.78□□□□□ -2.12
AP4E1-206ENST00000561397 HUWE1Q7Z6Z7 4374 aaKnown RBP1.77□□□□□ -2.13
AP4E1-206ENST00000561397 SMR3AQ99954 134 aa1.77□□□□□ -2.13
AP4E1-206ENST00000561397 DNAH11Q96DT5 4516 aa1.76□□□□□ -2.13
AP4E1-206ENST00000561397 DNAH2Q9P225 4427 aa1.76□□□□□ -2.13
AP4E1-206ENST00000561397 DMBT1Q9UGM3 2413 aaPredicted RBP1.76□□□□□ -2.13
AP4E1-206ENST00000561397 MGAM2Q2M2H8 2515 aa1.75□□□□□ -2.13
AP4E1-206ENST00000561397 M0QZ58 72 aa1.74□□□□□ -2.13
AP4E1-206ENST00000561397 C9orf92A6NGG3 77 aa1.73□□□□□ -2.13
AP4E1-206ENST00000561397 CRCT1Q9UGL9 99 aa1.73□□□□□ -2.13
AP4E1-206ENST00000561397 KRTAP21-3Q3LHN1 58 aa1.72□□□□□ -2.13
AP4E1-206ENST00000561397 INE1O15225 51 aa1.7□□□□□ -2.14
AP4E1-206ENST00000561397 SACSQ9NZJ4 4579 aa1.7□□□□□ -2.14
AP4E1-206ENST00000561397 STAB1Q9NY15 2570 aa1.7□□□□□ -2.14
AP4E1-206ENST00000561397 PKHD1L1Q86WI1 4243 aa1.69□□□□□ -2.14
AP4E1-206ENST00000561397 KMT2AQ03164 3969 aa1.69□□□□□ -2.14
AP4E1-206ENST00000561397 PKHD1P08F94 4074 aa1.67□□□□□ -2.14
AP4E1-206ENST00000561397 TNXBP22105 4242 aa1.66□□□□□ -2.14
AP4E1-206ENST00000561397 KRTAP4-1Q9BYQ7 146 aa1.65□□□□□ -2.15
AP4E1-206ENST00000561397 PLECQ15149 4684 aaKnown RBP1.63□□□□□ -2.15
AP4E1-206ENST00000561397 VPS13BQ7Z7G8 4022 aa1.63□□□□□ -2.15
AP4E1-206ENST00000561397 FCGBPQ9Y6R7 5405 aaPredicted RBP1.62□□□□□ -2.15
AP4E1-206ENST00000561397 FLGP20930 4061 aaPredicted RBP1.61□□□□□ -2.15
AP4E1-206ENST00000561397 STARD9Q9P2P6 4700 aa1.61□□□□□ -2.15
AP4E1-206ENST00000561397 DNAH5Q8TE73 4624 aa1.61□□□□□ -2.15
AP4E1-206ENST00000561397 PKD1P98161 4303 aa1.6□□□□□ -2.15
AP4E1-206ENST00000561397 Q5VSD8 79 aa1.6□□□□□ -2.15
AP4E1-206ENST00000561397 MYCBP2O75592 4640 aa1.6□□□□□ -2.15
AP4E1-206ENST00000561397 LRP1Q07954 4544 aaKnown RBP1.58□□□□□ -2.16
AP4E1-206ENST00000561397 FAT2Q9NYQ8 4349 aa1.57□□□□□ -2.16
AP4E1-206ENST00000561397 TNP1P09430 55 aa1.56□□□□□ -2.16
AP4E1-206ENST00000561397 HSPG2P98160 4391 aa1.56□□□□□ -2.16
AP4E1-206ENST00000561397 APOBP04114 4563 aaKnown RBP1.56□□□□□ -2.16
AP4E1-206ENST00000561397 LRP1BQ9NZR2 4599 aa1.56□□□□□ -2.16
AP4E1-206ENST00000561397 KRTAP10-4P60372 401 aaPredicted RBP1.55□□□□□ -2.16
AP4E1-206ENST00000561397 DYNC1H1Q14204 4646 aaKnown RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms