RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 USP9YO00507 2555 aaPredicted RBP-0.05□□□□□ -2.42
CTDSPL2-211ENST00000561189 STARD9Q9P2P6 4700 aa-0.06□□□□□ -2.42
CTDSPL2-211ENST00000561189 SMIM27A0A1W2PRY6 76 aa-0.06□□□□□ -2.42
CTDSPL2-211ENST00000561189 ABRACLQ9P1F3 81 aa-0.06□□□□□ -2.42
CTDSPL2-211ENST00000561189 RANBP2P49792 3224 aaKnown RBP-0.06□□□□□ -2.42
CTDSPL2-211ENST00000561189 FAT1Q14517 4588 aa-0.06□□□□□ -2.42
CTDSPL2-211ENST00000561189 ABCA13Q86UQ4 5058 aa-0.07□□□□□ -2.42
CTDSPL2-211ENST00000561189 NBEAQ8NFP9 2946 aa-0.07□□□□□ -2.42
CTDSPL2-211ENST00000561189 TLN2Q9Y4G6 2542 aa-0.07□□□□□ -2.42
CTDSPL2-211ENST00000561189 USP9XQ93008 2570 aaPredicted RBP-0.07□□□□□ -2.42
CTDSPL2-211ENST00000561189 CMC2Q9NRP2 79 aa-0.07□□□□□ -2.42
CTDSPL2-211ENST00000561189 SPTAN1Q13813 2472 aaKnown RBP-0.07□□□□□ -2.42
CTDSPL2-211ENST00000561189 MGAM2Q2M2H8 2515 aa-0.08□□□□□ -2.42
CTDSPL2-211ENST00000561189 LAMA1P25391 3075 aa-0.08□□□□□ -2.42
CTDSPL2-211ENST00000561189 KRTAP19-8Q3LI54 63 aa-0.08□□□□□ -2.42
CTDSPL2-211ENST00000561189 KRTAP20-2Q3LI61 65 aa-0.08□□□□□ -2.42
CTDSPL2-211ENST00000561189 HYDINQ4G0P3 5121 aa-0.08□□□□□ -2.42
CTDSPL2-211ENST00000561189 HERC2O95714 4834 aa-0.09□□□□□ -2.42
CTDSPL2-211ENST00000561189 COL6A5A8TX70 2615 aa-0.09□□□□□ -2.42
CTDSPL2-211ENST00000561189 DOPEY1Q5JWR5 2465 aa-0.09□□□□□ -2.42
CTDSPL2-211ENST00000561189 MUC17Q685J3 4493 aa-0.09□□□□□ -2.42
CTDSPL2-211ENST00000561189 SPRR2FQ96RM1 72 aa-0.09□□□□□ -2.42
CTDSPL2-211ENST00000561189 LAMA5O15230 3695 aa-0.1□□□□□ -2.42
CTDSPL2-211ENST00000561189 SNRPGP15A8MWD9 76 aa-0.1□□□□□ -2.43
CTDSPL2-211ENST00000561189 MT1AP04731 61 aa-0.1□□□□□ -2.43
CTDSPL2-211ENST00000561189 NOP10Q9NPE3 64 aaKnown RBP-0.1□□□□□ -2.43
CTDSPL2-211ENST00000561189 PLECQ15149 4684 aaKnown RBP-0.11□□□□□ -2.43
CTDSPL2-211ENST00000561189 TRRAPQ9Y4A5 3859 aa-0.11□□□□□ -2.43
CTDSPL2-211ENST00000561189 ITPR3Q14573 2671 aa-0.11□□□□□ -2.43
CTDSPL2-211ENST00000561189 DYNC1H1Q14204 4646 aaKnown RBP-0.11□□□□□ -2.43
CTDSPL2-211ENST00000561189 DNAH7Q8WXX0 4024 aa-0.11□□□□□ -2.43
CTDSPL2-211ENST00000561189 MYO9AB2RTY4 2548 aa-0.12□□□□□ -2.43
CTDSPL2-211ENST00000561189 A0A0C4DFX4 3053 aa-0.12□□□□□ -2.43
CTDSPL2-211ENST00000561189 USH2AO75445 5202 aa-0.13□□□□□ -2.43
CTDSPL2-211ENST00000561189 MMP24-AS1A0A0U1RRL7 71 aa-0.13□□□□□ -2.43
CTDSPL2-211ENST00000561189 M0QY20 66 aa-0.13□□□□□ -2.43
CTDSPL2-211ENST00000561189 MT4P47944 62 aa-0.13□□□□□ -2.43
CTDSPL2-211ENST00000561189 SPENQ96T58 3664 aaKnown RBP-0.13□□□□□ -2.43
CTDSPL2-211ENST00000561189 EPPK1P58107 5090 aaKnown RBP-0.13□□□□□ -2.43
CTDSPL2-211ENST00000561189 TRIOO75962 3097 aa-0.14□□□□□ -2.43
CTDSPL2-211ENST00000561189 COL12A1Q99715 3063 aa-0.14□□□□□ -2.43
CTDSPL2-211ENST00000561189 DNAH10Q8IVF4 4471 aa-0.14□□□□□ -2.43
CTDSPL2-211ENST00000561189 DNHD1Q96M86 4753 aa-0.14□□□□□ -2.43
CTDSPL2-211ENST00000561189 CFAP46Q8IYW2 2715 aa-0.15□□□□□ -2.43
CTDSPL2-211ENST00000561189 LINC01546A6NGU7 62 aa-0.15□□□□□ -2.43
CTDSPL2-211ENST00000561189 TNP1P09430 55 aa-0.15□□□□□ -2.43
CTDSPL2-211ENST00000561189 SMIM2Q9BVW6 85 aa-0.15□□□□□ -2.43
CTDSPL2-211ENST00000561189 CMYA5Q8N3K9 4069 aa-0.15□□□□□ -2.43
CTDSPL2-211ENST00000561189 NIPBLQ6KC79 2804 aaeCLIP-0.15□□□□□ -2.43
CTDSPL2-211ENST00000561189 TEX15Q9BXT5 2789 aa-0.16□□□□□ -2.43
CTDSPL2-211ENST00000561189 BIRC6Q9NR09 4857 aa-0.16□□□□□ -2.43
CTDSPL2-211ENST00000561189 DEFB1P60022 68 aa-0.16□□□□□ -2.44
CTDSPL2-211ENST00000561189 TLN1Q9Y490 2541 aaKnown RBP-0.16□□□□□ -2.44
CTDSPL2-211ENST00000561189 SMR3BP02814 79 aaPredicted RBP-0.17□□□□□ -2.44
CTDSPL2-211ENST00000561189 IQGAP2Q13576 1575 aa-0.17□□□□□ -2.44
CTDSPL2-211ENST00000561189 KRTAP19-5Q3LI72 72 aa-0.17□□□□□ -2.44
CTDSPL2-211ENST00000561189 CELSR3Q9NYQ7 3312 aa-0.17□□□□□ -2.44
CTDSPL2-211ENST00000561189 DNAH17Q9UFH2 4485 aa-0.18□□□□□ -2.44
CTDSPL2-211ENST00000561189 C5orf42Q9H799 3197 aa-0.18□□□□□ -2.44
CTDSPL2-211ENST00000561189 SPTBN5Q9NRC6 3674 aaKnown RBP-0.18□□□□□ -2.44
CTDSPL2-211ENST00000561189 LRBAP50851 2863 aa-0.18□□□□□ -2.44
CTDSPL2-211ENST00000561189 ITPR1Q14643 2758 aa-0.18□□□□□ -2.44
CTDSPL2-211ENST00000561189 CLPSL2Q6UWE3 100 aa-0.18□□□□□ -2.44
CTDSPL2-211ENST00000561189 CLTCL1P53675 1640 aa-0.19□□□□□ -2.44
CTDSPL2-211ENST00000561189 SPART-AS1P0CW21 52 aa-0.19□□□□□ -2.44
CTDSPL2-211ENST00000561189 ADGRG4Q8IZF6 3080 aa-0.19□□□□□ -2.44
CTDSPL2-211ENST00000561189 SRCAPQ6ZRS2 3230 aa-0.2□□□□□ -2.44
CTDSPL2-211ENST00000561189 DNAH5Q8TE73 4624 aa-0.2□□□□□ -2.44
CTDSPL2-211ENST00000561189 A8MTW9 85 aa-0.2□□□□□ -2.44
CTDSPL2-211ENST00000561189 CEP295Q9C0D2 2601 aa-0.21□□□□□ -2.44
CTDSPL2-211ENST00000561189 M0QZ58 72 aa-0.21□□□□□ -2.44
CTDSPL2-211ENST00000561189 POLR2KP53803 58 aaKnown RBP-0.21□□□□□ -2.44
CTDSPL2-211ENST00000561189 MT1HP80294 61 aa-0.21□□□□□ -2.44
CTDSPL2-211ENST00000561189 NDUFA1O15239 70 aa-0.22□□□□□ -2.44
CTDSPL2-211ENST00000561189 DEFB131AP59861 70 aa-0.22□□□□□ -2.44
CTDSPL2-211ENST00000561189 KRTAP8-1Q8IUC2 63 aa-0.22□□□□□ -2.44
CTDSPL2-211ENST00000561189 TOMM5Q8N4H5 51 aa-0.22□□□□□ -2.44
CTDSPL2-211ENST00000561189 LAMA2P24043 3122 aaKnown RBP-0.22□□□□□ -2.45
CTDSPL2-211ENST00000561189 DEFB4AO15263 64 aa-0.23□□□□□ -2.45
CTDSPL2-211ENST00000561189 MT1HL1P0DM35 61 aa-0.23□□□□□ -2.45
CTDSPL2-211ENST00000561189 MT1GP13640 62 aa-0.23□□□□□ -2.45
CTDSPL2-211ENST00000561189 MT1XP80297 61 aa-0.23□□□□□ -2.45
CTDSPL2-211ENST00000561189 CRYBG3Q68DQ2 2970 aa-0.23□□□□□ -2.45
CTDSPL2-211ENST00000561189 FRYQ5TBA9 3013 aa-0.23□□□□□ -2.45
CTDSPL2-211ENST00000561189 TRPM2O94759 1503 aa-0.23□□□□□ -2.45
CTDSPL2-211ENST00000561189 CSMD1Q96PZ7 3565 aa-0.24□□□□□ -2.45
CTDSPL2-211ENST00000561189 CEP250Q9BV73 2442 aa-0.24□□□□□ -2.45
CTDSPL2-211ENST00000561189 CHD7Q9P2D1 2997 aa-0.24□□□□□ -2.45
CTDSPL2-211ENST00000561189 MGAQ8IWI9 3026 aa-0.24□□□□□ -2.45
CTDSPL2-211ENST00000561189 ZFHX4Q86UP3 3567 aa-0.25□□□□□ -2.45
CTDSPL2-211ENST00000561189 MT1EP04732 61 aa-0.26□□□□□ -2.45
CTDSPL2-211ENST00000561189 MT1LQ93083 61 aa-0.26□□□□□ -2.45
CTDSPL2-211ENST00000561189 LEAP2Q969E1 77 aa-0.26□□□□□ -2.45
CTDSPL2-211ENST00000561189 ITPR2Q14571 2701 aa-0.27□□□□□ -2.45
CTDSPL2-211ENST00000561189 RELNP78509 3460 aa-0.27□□□□□ -2.45
CTDSPL2-211ENST00000561189 VPS13CQ709C8 3753 aa-0.27□□□□□ -2.45
CTDSPL2-211ENST00000561189 LAMA3Q16787 3333 aa-0.28□□□□□ -2.45
CTDSPL2-211ENST00000561189 TOMM7Q9P0U1 55 aa-0.29□□□□□ -2.46
CTDSPL2-211ENST00000561189 ATMQ13315 3056 aa-0.29□□□□□ -2.46
CTDSPL2-211ENST00000561189 ATP7AQ04656 1500 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms