RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 PKHD1L1Q86WI1 4243 aa0.43□□□□□ -2.34
HMG20A-211ENST00000560867 FAM208AQ9UK61 1670 aaKnown RBP0.43□□□□□ -2.34
HMG20A-211ENST00000560867 ALMS1Q8TCU4 4167 aa0.43□□□□□ -2.34
HMG20A-211ENST00000560867 KIF20BQ96Q89 1820 aa0.43□□□□□ -2.34
HMG20A-211ENST00000560867 ARFGEF2Q9Y6D5 1785 aa0.43□□□□□ -2.34
HMG20A-211ENST00000560867 PLECQ15149 4684 aaKnown RBP0.43□□□□□ -2.34
HMG20A-211ENST00000560867 ATXN8Q156A1 80 aa0.43□□□□□ -2.34
HMG20A-211ENST00000560867 DEFB109BQ30KR1 87 aa0.43□□□□□ -2.34
HMG20A-211ENST00000560867 UBR3Q6ZT12 1888 aa0.43□□□□□ -2.34
HMG20A-211ENST00000560867 LYSTQ99698 3801 aa0.43□□□□□ -2.34
HMG20A-211ENST00000560867 TNCP24821 2201 aa0.42□□□□□ -2.34
HMG20A-211ENST00000560867 DNAH5Q8TE73 4624 aa0.42□□□□□ -2.34
HMG20A-211ENST00000560867 HRNRQ86YZ3 2850 aaPredicted RBP0.42□□□□□ -2.34
HMG20A-211ENST00000560867 STARD9Q9P2P6 4700 aa0.42□□□□□ -2.34
HMG20A-211ENST00000560867 A0A087WWC5 75 aa0.42□□□□□ -2.34
HMG20A-211ENST00000560867 LOC730098B7Z3J9 87 aa0.42□□□□□ -2.34
HMG20A-211ENST00000560867 NDUFA3O95167 84 aa0.42□□□□□ -2.34
HMG20A-211ENST00000560867 ENHOQ6UWT2 76 aa0.42□□□□□ -2.34
HMG20A-211ENST00000560867 COX6B2Q6YFQ2 88 aa0.42□□□□□ -2.34
HMG20A-211ENST00000560867 NFAT5O94916 1531 aa0.42□□□□□ -2.34
HMG20A-211ENST00000560867 BCORQ6W2J9 1755 aa0.42□□□□□ -2.34
HMG20A-211ENST00000560867 DEFB124Q8NES8 71 aa0.41□□□□□ -2.34
HMG20A-211ENST00000560867 FXYD6Q9H0Q3 95 aa0.41□□□□□ -2.34
HMG20A-211ENST00000560867 GNG13Q9P2W3 67 aa0.41□□□□□ -2.34
HMG20A-211ENST00000560867 CDKN2A-AS1Q9UH64 79 aa0.41□□□□□ -2.34
HMG20A-211ENST00000560867 HUWE1Q7Z6Z7 4374 aaKnown RBP0.41□□□□□ -2.34
HMG20A-211ENST00000560867 DUOX1Q9NRD9 1551 aa0.4□□□□□ -2.34
HMG20A-211ENST00000560867 SPINK4O60575 86 aa0.4□□□□□ -2.35
HMG20A-211ENST00000560867 SPINK1P00995 79 aa0.4□□□□□ -2.35
HMG20A-211ENST00000560867 C3orf79P0CE67 100 aa0.4□□□□□ -2.35
HMG20A-211ENST00000560867 MT4P47944 62 aa0.4□□□□□ -2.35
HMG20A-211ENST00000560867 C4BP0C0L5 1744 aa0.4□□□□□ -2.35
HMG20A-211ENST00000560867 SPRR2EP22531 72 aa0.39□□□□□ -2.35
HMG20A-211ENST00000560867 SPRR2BP35325 72 aa0.39□□□□□ -2.35
HMG20A-211ENST00000560867 SPRR2AP35326 72 aa0.39□□□□□ -2.35
HMG20A-211ENST00000560867 WFDC13Q8IUB5 93 aa0.39□□□□□ -2.35
HMG20A-211ENST00000560867 PRXQ9BXM0 1461 aa0.39□□□□□ -2.35
HMG20A-211ENST00000560867 DNAH11Q96DT5 4516 aa0.39□□□□□ -2.35
HMG20A-211ENST00000560867 APOBP04114 4563 aaKnown RBP0.39□□□□□ -2.35
HMG20A-211ENST00000560867 DNAH10Q8IVF4 4471 aa0.38□□□□□ -2.35
HMG20A-211ENST00000560867 SPRR2DP22532 72 aa0.38□□□□□ -2.35
HMG20A-211ENST00000560867 KCNQ1DNQ9H478 68 aa0.38□□□□□ -2.35
HMG20A-211ENST00000560867 DEFB131BA0A096LNP1 70 aa0.37□□□□□ -2.35
HMG20A-211ENST00000560867 LINC01549A6NIU2 74 aa0.37□□□□□ -2.35
HMG20A-211ENST00000560867 U3KQA8 63 aa0.37□□□□□ -2.35
HMG20A-211ENST00000560867 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
HMG20A-211ENST00000560867 CRIP1P50238 77 aa0.36□□□□□ -2.35
HMG20A-211ENST00000560867 S100ZQ8WXG8 99 aa0.36□□□□□ -2.35
HMG20A-211ENST00000560867 LPAP08519 4548 aa0.36□□□□□ -2.35
HMG20A-211ENST00000560867 H0YAA0 97 aa0.35□□□□□ -2.35
HMG20A-211ENST00000560867 SFTA3P0C7M3 94 aa0.35□□□□□ -2.35
HMG20A-211ENST00000560867 LINC00158P58513 81 aa0.35□□□□□ -2.35
HMG20A-211ENST00000560867 UBL5Q9BZL1 73 aa0.35□□□□□ -2.35
HMG20A-211ENST00000560867 DNAH3Q8TD57 4116 aa0.35□□□□□ -2.35
HMG20A-211ENST00000560867 VPS13DQ5THJ4 4388 aa0.34□□□□□ -2.35
HMG20A-211ENST00000560867 ETDCA0A1B0GVM5 59 aa0.34□□□□□ -2.36
HMG20A-211ENST00000560867 DNAH6Q9C0G6 4158 aa0.34□□□□□ -2.36
HMG20A-211ENST00000560867 A0A1B0GUL6 1792 aa0.34□□□□□ -2.36
HMG20A-211ENST00000560867 TNXBP22105 4242 aa0.33□□□□□ -2.36
HMG20A-211ENST00000560867 MRPL33O75394 65 aaKnown RBP0.33□□□□□ -2.36
HMG20A-211ENST00000560867 SMR3BP02814 79 aaPredicted RBP0.33□□□□□ -2.36
HMG20A-211ENST00000560867 PRM1P04553 51 aa0.32□□□□□ -2.36
HMG20A-211ENST00000560867 DEFB114Q30KQ6 69 aa0.32□□□□□ -2.36
HMG20A-211ENST00000560867 LYNX1G3V0Z9 82 aa0.31□□□□□ -2.36
HMG20A-211ENST00000560867 DNAH2Q9P225 4427 aa0.3□□□□□ -2.36
HMG20A-211ENST00000560867 MUC17Q685J3 4493 aa0.3□□□□□ -2.36
HMG20A-211ENST00000560867 VPS13BQ7Z7G8 4022 aa0.29□□□□□ -2.36
HMG20A-211ENST00000560867 DNAH17Q9UFH2 4485 aa0.29□□□□□ -2.36
HMG20A-211ENST00000560867 DEFB130BP0DP73 79 aa0.28□□□□□ -2.36
HMG20A-211ENST00000560867 DEFB130AP0DP74 79 aa0.28□□□□□ -2.36
HMG20A-211ENST00000560867 SPRR2FQ96RM1 72 aa0.28□□□□□ -2.36
HMG20A-211ENST00000560867 M0R2T5 61 aa0.27□□□□□ -2.37
HMG20A-211ENST00000560867 K7EMI3 77 aa0.26□□□□□ -2.37
HMG20A-211ENST00000560867 IAPPP10997 89 aa0.26□□□□□ -2.37
HMG20A-211ENST00000560867 M0R1W7 72 aa0.25□□□□□ -2.37
HMG20A-211ENST00000560867 FCER1GP30273 86 aa0.25□□□□□ -2.37
HMG20A-211ENST00000560867 DEFB135Q30KP9 77 aa0.25□□□□□ -2.37
HMG20A-211ENST00000560867 DNAH8Q96JB1 4490 aa0.23□□□□□ -2.37
HMG20A-211ENST00000560867 IGIPA6NJ69 53 aa0.23□□□□□ -2.37
HMG20A-211ENST00000560867 KRTAP20-2Q3LI61 65 aa0.23□□□□□ -2.37
HMG20A-211ENST00000560867 NCBP2-AS2Q69YL0 99 aa0.23□□□□□ -2.37
HMG20A-211ENST00000560867 MT1HP80294 61 aa0.22□□□□□ -2.37
HMG20A-211ENST00000560867 MINOS1Q5TGZ0 78 aa0.22□□□□□ -2.37
HMG20A-211ENST00000560867 NMES1Q9C002 83 aa0.22□□□□□ -2.37
HMG20A-211ENST00000560867 FLGP20930 4061 aaPredicted RBP0.21□□□□□ -2.38
HMG20A-211ENST00000560867 RPS27P42677 84 aaKnown RBP0.21□□□□□ -2.38
HMG20A-211ENST00000560867 RPS27LQ71UM5 84 aaKnown RBP0.21□□□□□ -2.38
HMG20A-211ENST00000560867 MT1HL1P0DM35 61 aa0.2□□□□□ -2.38
HMG20A-211ENST00000560867 SERF2P84101 59 aa0.2□□□□□ -2.38
HMG20A-211ENST00000560867 DEFB104AQ8WTQ1 72 aa0.2□□□□□ -2.38
HMG20A-211ENST00000560867 GCC2Q8IWJ2 1684 aa0.2□□□□□ -2.38
HMG20A-211ENST00000560867 WT1-ASQ06250 92 aa0.19□□□□□ -2.38
HMG20A-211ENST00000560867 S4R3F8 94 aa0.19□□□□□ -2.38
HMG20A-211ENST00000560867 C6orf48Q9UBA6 75 aa0.18□□□□□ -2.38
HMG20A-211ENST00000560867 ANKRD36CQ5JPF3 1778 aa0.18□□□□□ -2.38
HMG20A-211ENST00000560867 H0YGG7 62 aa0.17□□□□□ -2.38
HMG20A-211ENST00000560867 PRLHP81277 87 aa0.17□□□□□ -2.38
HMG20A-211ENST00000560867 DEFB106AQ8N104 65 aa0.15□□□□□ -2.39
HMG20A-211ENST00000560867 LINC00308Q8TCZ7 52 aa0.15□□□□□ -2.39
HMG20A-211ENST00000560867 H0YGX0 51 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms