RNA–Protein interactions for RNA: ENST00000560475.1

TRIP4-209, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-209ENST00000560475 EP400Q96L91 3159 aa0.72□□□□□ -2.29
TRIP4-209ENST00000560475 USP9XQ93008 2570 aaPredicted RBP0.72□□□□□ -2.29
TRIP4-209ENST00000560475 UTP20O75691 2785 aaKnown RBP0.72□□□□□ -2.29
TRIP4-209ENST00000560475 DMXL2Q8TDJ6 3036 aa0.72□□□□□ -2.29
TRIP4-209ENST00000560475 FLNCQ14315 2725 aa0.72□□□□□ -2.29
TRIP4-209ENST00000560475 CENPFP49454 3210 aa0.72□□□□□ -2.29
TRIP4-209ENST00000560475 RELNP78509 3460 aa0.72□□□□□ -2.29
TRIP4-209ENST00000560475 CELSR3Q9NYQ7 3312 aa0.71□□□□□ -2.3
TRIP4-209ENST00000560475 TEX15Q9BXT5 2789 aa0.71□□□□□ -2.3
TRIP4-209ENST00000560475 DOPEY1Q5JWR5 2465 aa0.71□□□□□ -2.3
TRIP4-209ENST00000560475 FREM2Q5SZK8 3169 aa0.71□□□□□ -2.3
TRIP4-209ENST00000560475 CHD8Q9HCK8 2581 aa0.71□□□□□ -2.3
TRIP4-209ENST00000560475 TLN1Q9Y490 2541 aaKnown RBP0.71□□□□□ -2.3
TRIP4-209ENST00000560475 MYCBP2O75592 4640 aa0.7□□□□□ -2.3
TRIP4-209ENST00000560475 SMR3BP02814 79 aaPredicted RBP0.7□□□□□ -2.3
TRIP4-209ENST00000560475 UNC79Q9P2D8 2635 aa0.69□□□□□ -2.3
TRIP4-209ENST00000560475 NBPF19A0A087WUL8 3843 aa0.69□□□□□ -2.3
TRIP4-209ENST00000560475 DNAH11Q96DT5 4516 aa0.69□□□□□ -2.3
TRIP4-209ENST00000560475 LAMA1P25391 3075 aa0.69□□□□□ -2.3
TRIP4-209ENST00000560475 TACC2O95359 2948 aa0.69□□□□□ -2.3
TRIP4-209ENST00000560475 STAB2Q8WWQ8 2551 aa0.69□□□□□ -2.3
TRIP4-209ENST00000560475 STAB1Q9NY15 2570 aa0.69□□□□□ -2.3
TRIP4-209ENST00000560475 LAMA2P24043 3122 aaKnown RBP0.69□□□□□ -2.3
TRIP4-209ENST00000560475 SPTAN1Q13813 2472 aaKnown RBP0.69□□□□□ -2.3
TRIP4-209ENST00000560475 ZANQ9Y493 2812 aa0.68□□□□□ -2.3
TRIP4-209ENST00000560475 ITPR2Q14571 2701 aa0.68□□□□□ -2.3
TRIP4-209ENST00000560475 MXRA5Q9NR99 2828 aa0.68□□□□□ -2.3
TRIP4-209ENST00000560475 NSD1Q96L73 2696 aaPredicted RBP0.67□□□□□ -2.3
TRIP4-209ENST00000560475 PCNTO95613 3336 aa0.67□□□□□ -2.3
TRIP4-209ENST00000560475 ACACBO00763 2458 aa0.67□□□□□ -2.3
TRIP4-209ENST00000560475 HIVEP1P15822 2718 aa0.67□□□□□ -2.3
TRIP4-209ENST00000560475 LOC400499M0QZD8 3231 aa0.67□□□□□ -2.3
TRIP4-209ENST00000560475 TLN2Q9Y4G6 2542 aa0.67□□□□□ -2.3
TRIP4-209ENST00000560475 TEP1Q99973 2627 aaKnown RBP0.67□□□□□ -2.3
TRIP4-209ENST00000560475 CSMD3Q7Z407 3707 aa0.66□□□□□ -2.3
TRIP4-209ENST00000560475 FLNAP21333 2647 aaKnown RBP0.66□□□□□ -2.3
TRIP4-209ENST00000560475 LAMA3Q16787 3333 aa0.66□□□□□ -2.3
TRIP4-209ENST00000560475 PKD1L1Q8TDX9 2849 aa0.66□□□□□ -2.3
TRIP4-209ENST00000560475 MYO18BQ8IUG5 2567 aa0.66□□□□□ -2.3
TRIP4-209ENST00000560475 NBEAL1Q6ZS30 2694 aa0.66□□□□□ -2.3
TRIP4-209ENST00000560475 MYO9AB2RTY4 2548 aa0.66□□□□□ -2.3
TRIP4-209ENST00000560475 DMDP11532 3685 aa0.66□□□□□ -2.3
TRIP4-209ENST00000560475 NBEAL2Q6ZNJ1 2754 aa0.65□□□□□ -2.3
TRIP4-209ENST00000560475 KRTAP19-5Q3LI72 72 aa0.65□□□□□ -2.31
TRIP4-209ENST00000560475 ANKRD11Q6UB99 2663 aaPredicted RBP0.65□□□□□ -2.31
TRIP4-209ENST00000560475 DNAH8Q96JB1 4490 aa0.65□□□□□ -2.31
TRIP4-209ENST00000560475 XIRP2A4UGR9 3374 aa0.65□□□□□ -2.31
TRIP4-209ENST00000560475 MUC3AQ02505 3323 aa0.64□□□□□ -2.31
TRIP4-209ENST00000560475 UNC80Q8N2C7 3258 aa0.64□□□□□ -2.31
TRIP4-209ENST00000560475 CSMD1Q96PZ7 3565 aa0.64□□□□□ -2.31
TRIP4-209ENST00000560475 ZFYVE26Q68DK2 2539 aa0.64□□□□□ -2.31
TRIP4-209ENST00000560475 CEP295Q9C0D2 2601 aa0.64□□□□□ -2.31
TRIP4-209ENST00000560475 MT1AP04731 61 aa0.64□□□□□ -2.31
TRIP4-209ENST00000560475 TNXBP22105 4242 aa0.64□□□□□ -2.31
TRIP4-209ENST00000560475 SPTBN5Q9NRC6 3674 aaKnown RBP0.64□□□□□ -2.31
TRIP4-209ENST00000560475 HRNRQ86YZ3 2850 aaPredicted RBP0.63□□□□□ -2.31
TRIP4-209ENST00000560475 FRAS1Q86XX4 4008 aa0.63□□□□□ -2.31
TRIP4-209ENST00000560475 KMT2AQ03164 3969 aa0.63□□□□□ -2.31
TRIP4-209ENST00000560475 SACSQ9NZJ4 4579 aa0.63□□□□□ -2.31
TRIP4-209ENST00000560475 FASNP49327 2511 aaKnown RBP0.63□□□□□ -2.31
TRIP4-209ENST00000560475 SVEP1Q4LDE5 3571 aa0.62□□□□□ -2.31
TRIP4-209ENST00000560475 VCANP13611 3396 aa0.62□□□□□ -2.31
TRIP4-209ENST00000560475 DNAH3Q8TD57 4116 aa0.62□□□□□ -2.31
TRIP4-209ENST00000560475 USP34Q70CQ2 3546 aa0.62□□□□□ -2.31
TRIP4-209ENST00000560475 LYSTQ99698 3801 aa0.62□□□□□ -2.31
TRIP4-209ENST00000560475 MGAM2Q2M2H8 2515 aa0.62□□□□□ -2.31
TRIP4-209ENST00000560475 SPENQ96T58 3664 aaKnown RBP0.61□□□□□ -2.31
TRIP4-209ENST00000560475 CMYA5Q8N3K9 4069 aa0.61□□□□□ -2.31
TRIP4-209ENST00000560475 LAMA5O15230 3695 aa0.61□□□□□ -2.31
TRIP4-209ENST00000560475 DYNC2H1Q8NCM8 4307 aaKnown RBP0.61□□□□□ -2.31
TRIP4-209ENST00000560475 ADGRG4Q8IZF6 3080 aa0.61□□□□□ -2.31
TRIP4-209ENST00000560475 VPS13BQ7Z7G8 4022 aa0.61□□□□□ -2.31
TRIP4-209ENST00000560475 ASPMQ8IZT6 3477 aa0.61□□□□□ -2.31
TRIP4-209ENST00000560475 CSMD2Q7Z408 3487 aa0.6□□□□□ -2.31
TRIP4-209ENST00000560475 SPRR2DP22532 72 aa0.6□□□□□ -2.31
TRIP4-209ENST00000560475 SPRR2BP35325 72 aa0.6□□□□□ -2.31
TRIP4-209ENST00000560475 SPRR2GQ9BYE4 73 aa0.6□□□□□ -2.31
TRIP4-209ENST00000560475 SMG1Q96Q15 3661 aaKnown RBP0.6□□□□□ -2.31
TRIP4-209ENST00000560475 BSNQ9UPA5 3926 aa0.59□□□□□ -2.31
TRIP4-209ENST00000560475 FLNBO75369 2602 aaKnown RBP0.59□□□□□ -2.31
TRIP4-209ENST00000560475 SPRR2AP35326 72 aa0.59□□□□□ -2.31
TRIP4-209ENST00000560475 FLGP20930 4061 aaPredicted RBP0.59□□□□□ -2.32
TRIP4-209ENST00000560475 CUBNO60494 3623 aa0.58□□□□□ -2.32
TRIP4-209ENST00000560475 DNAH2Q9P225 4427 aa0.58□□□□□ -2.32
TRIP4-209ENST00000560475 KRTAP6-2Q3LI66 62 aa0.58□□□□□ -2.32
TRIP4-209ENST00000560475 HUWE1Q7Z6Z7 4374 aaKnown RBP0.58□□□□□ -2.32
TRIP4-209ENST00000560475 BRCA2P51587 3418 aa0.58□□□□□ -2.32
TRIP4-209ENST00000560475 PRKDCP78527 4128 aaKnown RBP0.57□□□□□ -2.32
TRIP4-209ENST00000560475 EYSQ5T1H1 3165 aa0.57□□□□□ -2.32
TRIP4-209ENST00000560475 ANK3Q12955 4377 aaKnown RBP0.57□□□□□ -2.32
TRIP4-209ENST00000560475 SPRR2FQ96RM1 72 aa0.57□□□□□ -2.32
TRIP4-209ENST00000560475 DNAH10Q8IVF4 4471 aa0.57□□□□□ -2.32
TRIP4-209ENST00000560475 DNAH7Q8WXX0 4024 aa0.57□□□□□ -2.32
TRIP4-209ENST00000560475 DNAH1Q9P2D7 4330 aa0.57□□□□□ -2.32
TRIP4-209ENST00000560475 HSPG2P98160 4391 aa0.57□□□□□ -2.32
TRIP4-209ENST00000560475 PKHD1L1Q86WI1 4243 aa0.56□□□□□ -2.32
TRIP4-209ENST00000560475 WDFY3Q8IZQ1 3526 aa0.56□□□□□ -2.32
TRIP4-209ENST00000560475 IGSF10Q6WRI0 2623 aa0.56□□□□□ -2.32
TRIP4-209ENST00000560475 TRRAPQ9Y4A5 3859 aa0.56□□□□□ -2.32
TRIP4-209ENST00000560475 MT1EP04732 61 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms