RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 CLASP1Q7Z460 1538 aa-0.56□□□□□ -2.5
SPG11-222ENST00000560435 RRBP1Q9P2E9 1410 aaKnown RBP-0.56□□□□□ -2.5
SPG11-222ENST00000560435 CDC42BPGQ6DT37 1551 aa-0.57□□□□□ -2.5
SPG11-222ENST00000560435 DNMBPQ6XZF7 1577 aa-0.57□□□□□ -2.5
SPG11-222ENST00000560435 MYO5CQ9NQX4 1742 aa-0.57□□□□□ -2.5
SPG11-222ENST00000560435 M0QZ58 72 aa-0.57□□□□□ -2.5
SPG11-222ENST00000560435 SFTA3P0C7M3 94 aa-0.57□□□□□ -2.5
SPG11-222ENST00000560435 FCER1GP30273 86 aa-0.57□□□□□ -2.5
SPG11-222ENST00000560435 ATXN8Q156A1 80 aa-0.57□□□□□ -2.5
SPG11-222ENST00000560435 SMG1Q96Q15 3661 aaKnown RBP-0.57□□□□□ -2.5
SPG11-222ENST00000560435 C3P01024 1663 aa-0.58□□□□□ -2.5
SPG11-222ENST00000560435 TRRAPQ9Y4A5 3859 aa-0.58□□□□□ -2.5
SPG11-222ENST00000560435 SMARCA2P51531 1590 aa-0.58□□□□□ -2.5
SPG11-222ENST00000560435 DMXL2Q8TDJ6 3036 aa-0.59□□□□□ -2.5
SPG11-222ENST00000560435 A8MTW9 85 aa-0.59□□□□□ -2.5
SPG11-222ENST00000560435 M0QY20 66 aa-0.59□□□□□ -2.5
SPG11-222ENST00000560435 DNAH10Q8IVF4 4471 aa-0.59□□□□□ -2.5
SPG11-222ENST00000560435 CFAP54Q96N23 3096 aa-0.6□□□□□ -2.51
SPG11-222ENST00000560435 GLI2P10070 1586 aa-0.6□□□□□ -2.51
SPG11-222ENST00000560435 K7EMI3 77 aa-0.6□□□□□ -2.51
SPG11-222ENST00000560435 MT2AP02795 61 aa-0.6□□□□□ -2.51
SPG11-222ENST00000560435 MT1GP13640 62 aa-0.6□□□□□ -2.51
SPG11-222ENST00000560435 MT1MQ8N339 61 aa-0.6□□□□□ -2.51
SPG11-222ENST00000560435 HILPDAQ9Y5L2 63 aa-0.6□□□□□ -2.51
SPG11-222ENST00000560435 ATMQ13315 3056 aa-0.6□□□□□ -2.51
SPG11-222ENST00000560435 MROH1Q8NDA8 1641 aa-0.6□□□□□ -2.51
SPG11-222ENST00000560435 CSMD2Q7Z408 3487 aa-0.61□□□□□ -2.51
SPG11-222ENST00000560435 DUOX2Q9NRD8 1548 aa-0.61□□□□□ -2.51
SPG11-222ENST00000560435 CRYBG3Q68DQ2 2970 aa-0.61□□□□□ -2.51
SPG11-222ENST00000560435 TIAM1Q13009 1591 aa-0.62□□□□□ -2.51
SPG11-222ENST00000560435 A0A1B0GUL6 1792 aa-0.62□□□□□ -2.51
SPG11-222ENST00000560435 UGGT2Q9NYU1 1516 aa-0.62□□□□□ -2.51
SPG11-222ENST00000560435 ABCA9Q8IUA7 1624 aa-0.62□□□□□ -2.51
SPG11-222ENST00000560435 LINC01546A6NGU7 62 aa-0.62□□□□□ -2.51
SPG11-222ENST00000560435 LINC01549A6NIU2 74 aa-0.62□□□□□ -2.51
SPG11-222ENST00000560435 DNAH5Q8TE73 4624 aa-0.62□□□□□ -2.51
SPG11-222ENST00000560435 PRUNE2Q8WUY3 3088 aa-0.63□□□□□ -2.51
SPG11-222ENST00000560435 IQGAP3Q86VI3 1631 aa-0.63□□□□□ -2.51
SPG11-222ENST00000560435 MADDQ8WXG6 1647 aa-0.63□□□□□ -2.51
SPG11-222ENST00000560435 GNG13Q9P2W3 67 aa-0.63□□□□□ -2.51
SPG11-222ENST00000560435 KAAG1Q9UBP8 84 aa-0.63□□□□□ -2.51
SPG11-222ENST00000560435 CROCC2H7BZ55 1655 aa-0.63□□□□□ -2.51
SPG11-222ENST00000560435 TLN1Q9Y490 2541 aaKnown RBP-0.64□□□□□ -2.51
SPG11-222ENST00000560435 ZFHX4Q86UP3 3567 aa-0.64□□□□□ -2.51
SPG11-222ENST00000560435 IGIPA6NJ69 53 aa-0.64□□□□□ -2.51
SPG11-222ENST00000560435 M0R1W7 72 aa-0.64□□□□□ -2.51
SPG11-222ENST00000560435 PDCD5O14737 125 aa-0.64□□□□□ -2.51
SPG11-222ENST00000560435 SPART-AS1P0CW21 52 aa-0.64□□□□□ -2.51
SPG11-222ENST00000560435 LINC00308Q8TCZ7 52 aa-0.64□□□□□ -2.51
SPG11-222ENST00000560435 SMCO4Q9NRQ5 59 aa-0.64□□□□□ -2.51
SPG11-222ENST00000560435 TMEM167BQ9NRX6 74 aa-0.64□□□□□ -2.51
SPG11-222ENST00000560435 SMIM27A0A1W2PRY6 76 aa-0.65□□□□□ -2.51
SPG11-222ENST00000560435 MT1BP07438 61 aa-0.65□□□□□ -2.51
SPG11-222ENST00000560435 SERF2P84101 59 aa-0.65□□□□□ -2.51
SPG11-222ENST00000560435 ABRACLQ9P1F3 81 aa-0.65□□□□□ -2.51
SPG11-222ENST00000560435 FREM2Q5SZK8 3169 aa-0.65□□□□□ -2.51
SPG11-222ENST00000560435 ABCA13Q86UQ4 5058 aa-0.66□□□□□ -2.51
SPG11-222ENST00000560435 ABCA6Q8N139 1617 aa-0.66□□□□□ -2.51
SPG11-222ENST00000560435 NMES1Q9C002 83 aa-0.66□□□□□ -2.52
SPG11-222ENST00000560435 FAM208AQ9UK61 1670 aaKnown RBP-0.66□□□□□ -2.52
SPG11-222ENST00000560435 KIF21BO75037 1637 aa-0.67□□□□□ -2.52
SPG11-222ENST00000560435 PREX2Q70Z35 1606 aa-0.67□□□□□ -2.52
SPG11-222ENST00000560435 ALS2Q96Q42 1657 aa-0.67□□□□□ -2.52
SPG11-222ENST00000560435 EEA1Q15075 1411 aa-0.67□□□□□ -2.52
SPG11-222ENST00000560435 MYO15AQ9UKN7 3530 aa-0.68□□□□□ -2.52
SPG11-222ENST00000560435 FRYLO94915 3013 aa-0.68□□□□□ -2.52
SPG11-222ENST00000560435 H0YGX0 51 aa-0.68□□□□□ -2.52
SPG11-222ENST00000560435 DEFB4AO15263 64 aa-0.68□□□□□ -2.52
SPG11-222ENST00000560435 WFDC10BQ8IUB3 73 aa-0.68□□□□□ -2.52
SPG11-222ENST00000560435 BOD1L1Q8NFC6 3051 aa-0.68□□□□□ -2.52
SPG11-222ENST00000560435 EFCAB5A4FU69 1503 aa-0.69□□□□□ -2.52
SPG11-222ENST00000560435 VPS13CQ709C8 3753 aa-0.7□□□□□ -2.52
SPG11-222ENST00000560435 A0A087WWC5 75 aa-0.7□□□□□ -2.52
SPG11-222ENST00000560435 DEFB131AP59861 70 aa-0.7□□□□□ -2.52
SPG11-222ENST00000560435 LEAP2Q969E1 77 aa-0.7□□□□□ -2.52
SPG11-222ENST00000560435 EFCAB6Q5THR3 1501 aa-0.7□□□□□ -2.52
SPG11-222ENST00000560435 SCRIBQ14160 1630 aa-0.71□□□□□ -2.52
SPG11-222ENST00000560435 WDFY3Q8IZQ1 3526 aa-0.71□□□□□ -2.52
SPG11-222ENST00000560435 POLR2KP53803 58 aaKnown RBP-0.71□□□□□ -2.52
SPG11-222ENST00000560435 DEFB136Q30KP8 78 aa-0.71□□□□□ -2.52
SPG11-222ENST00000560435 SZT2Q5T011 3432 aa-0.73□□□□□ -2.53
SPG11-222ENST00000560435 AGLP35573 1532 aa-0.73□□□□□ -2.53
SPG11-222ENST00000560435 SYCP2Q9BX26 1530 aa-0.73□□□□□ -2.53
SPG11-222ENST00000560435 S100ZQ8WXG8 99 aa-0.73□□□□□ -2.53
SPG11-222ENST00000560435 LMO7Q8WWI1 1683 aa-0.73□□□□□ -2.53
SPG11-222ENST00000560435 PCNTO95613 3336 aa-0.73□□□□□ -2.53
SPG11-222ENST00000560435 ABCA10Q8WWZ4 1543 aa-0.74□□□□□ -2.53
SPG11-222ENST00000560435 UGGT1Q9NYU2 1555 aa-0.74□□□□□ -2.53
SPG11-222ENST00000560435 TFF3Q07654 80 aa-0.74□□□□□ -2.53
SPG11-222ENST00000560435 CPS1P31327 1500 aa-0.74□□□□□ -2.53
SPG11-222ENST00000560435 CCDC180Q9P1Z9 1646 aa-0.75□□□□□ -2.53
SPG11-222ENST00000560435 KRTAP20-1Q3LI63 56 aa-0.75□□□□□ -2.53
SPG11-222ENST00000560435 PLNP26678 52 aa-0.76□□□□□ -2.53
SPG11-222ENST00000560435 RPS29P62273 56 aaKnown RBP-0.76□□□□□ -2.53
SPG11-222ENST00000560435 ABCA5Q8WWZ7 1642 aa-0.77□□□□□ -2.53
SPG11-222ENST00000560435 MT1FP04733 61 aa-0.77□□□□□ -2.53
SPG11-222ENST00000560435 SMIM5Q71RC9 77 aa-0.77□□□□□ -2.53
SPG11-222ENST00000560435 SMIM2Q9BVW6 85 aa-0.77□□□□□ -2.53
SPG11-222ENST00000560435 CEP350Q5VT06 3117 aa-0.77□□□□□ -2.53
SPG11-222ENST00000560435 SPEGQ15772 3267 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms