RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 LINC00575Q6W349 94 aa2.49□□□□□ -2.01
CASC4-208ENST00000559151 KAAG1Q9UBP8 84 aa2.49□□□□□ -2.01
CASC4-208ENST00000559151 RNF213Q63HN8 5207 aa2.48□□□□□ -2.01
CASC4-208ENST00000559151 H3BUX3 64 aa2.48□□□□□ -2.01
CASC4-208ENST00000559151 Q6ZRX8 168 aa2.48□□□□□ -2.01
CASC4-208ENST00000559151 SMIM11BQ8TCY0 68 aa2.48□□□□□ -2.01
CASC4-208ENST00000559151 IGIPA6NJ69 53 aa2.47□□□□□ -2.01
CASC4-208ENST00000559151 G3V318 75 aa2.47□□□□□ -2.01
CASC4-208ENST00000559151 I3L3M4 83 aa2.47□□□□□ -2.01
CASC4-208ENST00000559151 SNRPGP62308 76 aaKnown RBP2.47□□□□□ -2.01
CASC4-208ENST00000559151 DEFB114Q30KQ6 69 aa2.47□□□□□ -2.01
CASC4-208ENST00000559151 C10orf99Q6UWK7 81 aa2.47□□□□□ -2.01
CASC4-208ENST00000559151 GVQW2A0A096LPI5 108 aaPredicted RBP2.46□□□□□ -2.02
CASC4-208ENST00000559151 SSBP3-AS1Q7Z2R9 100 aa2.46□□□□□ -2.02
CASC4-208ENST00000559151 PLAC4Q8WY50 150 aa2.46□□□□□ -2.02
CASC4-208ENST00000559151 TIMM8BQ9Y5J9 83 aaPredicted RBP2.45□□□□□ -2.02
CASC4-208ENST00000559151 KCNQ1DNQ9H478 68 aa2.44□□□□□ -2.02
CASC4-208ENST00000559151 ETDCA0A1B0GVM5 59 aa2.43□□□□□ -2.02
CASC4-208ENST00000559151 SPINK4O60575 86 aa2.43□□□□□ -2.02
CASC4-208ENST00000559151 LRP2P98164 4655 aa2.43□□□□□ -2.02
CASC4-208ENST00000559151 LRP1Q07954 4544 aaKnown RBP2.43□□□□□ -2.02
CASC4-208ENST00000559151 MUC2Q02817 5179 aa2.42□□□□□ -2.02
CASC4-208ENST00000559151 PKHD1L1Q86WI1 4243 aa2.42□□□□□ -2.02
CASC4-208ENST00000559151 FAT3Q8TDW7 4589 aa2.42□□□□□ -2.02
CASC4-208ENST00000559151 LINC01546A6NGU7 62 aa2.42□□□□□ -2.02
CASC4-208ENST00000559151 LELP1Q5T871 98 aa2.41□□□□□ -2.02
CASC4-208ENST00000559151 DNAH8Q96JB1 4490 aa2.4□□□□□ -2.02
CASC4-208ENST00000559151 CPSF4LA6NMK7 179 aaKnown RBP2.4□□□□□ -2.03
CASC4-208ENST00000559151 MINOS1Q5TGZ0 78 aa2.4□□□□□ -2.03
CASC4-208ENST00000559151 Q5VSD8 79 aa2.4□□□□□ -2.03
CASC4-208ENST00000559151 DEFB136Q30KP8 78 aa2.39□□□□□ -2.03
CASC4-208ENST00000559151 TNXBP22105 4242 aa2.38□□□□□ -2.03
CASC4-208ENST00000559151 FXYD6P3P58550 94 aa2.38□□□□□ -2.03
CASC4-208ENST00000559151 SPINK13Q1W4C9 94 aa2.38□□□□□ -2.03
CASC4-208ENST00000559151 H0YGX0 51 aa2.36□□□□□ -2.03
CASC4-208ENST00000559151 NDUFA3O95167 84 aa2.36□□□□□ -2.03
CASC4-208ENST00000559151 FSIP2Q5CZC0 6907 aa2.36□□□□□ -2.03
CASC4-208ENST00000559151 FAT4Q6V0I7 4981 aa2.35□□□□□ -2.03
CASC4-208ENST00000559151 RPS27P42677 84 aaKnown RBP2.35□□□□□ -2.03
CASC4-208ENST00000559151 SMR3BP02814 79 aaPredicted RBP2.34□□□□□ -2.03
CASC4-208ENST00000559151 DEFB131BA0A096LNP1 70 aa2.33□□□□□ -2.04
CASC4-208ENST00000559151 RPL37P61927 97 aaKnown RBP2.33□□□□□ -2.04
CASC4-208ENST00000559151 LINC01590Q5TEZ4 76 aa2.33□□□□□ -2.04
CASC4-208ENST00000559151 UBE2DNLQ8IWF7 75 aa2.32□□□□□ -2.04
CASC4-208ENST00000559151 H3BSH0 61 aa2.31□□□□□ -2.04
CASC4-208ENST00000559151 APLNQ9ULZ1 77 aa2.3□□□□□ -2.04
CASC4-208ENST00000559151 CRIP1P50238 77 aa2.29□□□□□ -2.04
CASC4-208ENST00000559151 LEAP2Q969E1 77 aa2.28□□□□□ -2.04
CASC4-208ENST00000559151 H3BUA1 57 aa2.27□□□□□ -2.05
CASC4-208ENST00000559151 TMEM167BQ9NRX6 74 aa2.27□□□□□ -2.05
CASC4-208ENST00000559151 CRIPTQ9P021 101 aa2.27□□□□□ -2.05
CASC4-208ENST00000559151 LINC00158P58513 81 aa2.26□□□□□ -2.05
CASC4-208ENST00000559151 DEFB135Q30KP9 77 aa2.26□□□□□ -2.05
CASC4-208ENST00000559151 DEFB104AQ8WTQ1 72 aa2.26□□□□□ -2.05
CASC4-208ENST00000559151 TTTY10Q9BZA0 68 aa2.25□□□□□ -2.05
CASC4-208ENST00000559151 CDKN2A-AS1Q9UH64 79 aa2.25□□□□□ -2.05
CASC4-208ENST00000559151 Q8IZM0 81 aa2.24□□□□□ -2.05
CASC4-208ENST00000559151 ARHGAP5-AS1Q96IT6 56 aa2.24□□□□□ -2.05
CASC4-208ENST00000559151 USMG5Q96IX5 58 aa2.24□□□□□ -2.05
CASC4-208ENST00000559151 KLK9Q2XQG4 91 aa2.23□□□□□ -2.05
CASC4-208ENST00000559151 PIGYQ3MUY2 71 aa2.22□□□□□ -2.05
CASC4-208ENST00000559151 LINC00308Q8TCZ7 52 aa2.22□□□□□ -2.05
CASC4-208ENST00000559151 LPAP08519 4548 aa2.21□□□□□ -2.05
CASC4-208ENST00000559151 MT1HL1P0DM35 61 aa2.21□□□□□ -2.06
CASC4-208ENST00000559151 RPL39P5Q59GN2 51 aa2.2□□□□□ -2.06
CASC4-208ENST00000559151 MRPL34Q9BQ48 92 aaKnown RBP2.2□□□□□ -2.06
CASC4-208ENST00000559151 TP53AIP1Q9HCN2 124 aa2.2□□□□□ -2.06
CASC4-208ENST00000559151 DEFB4AO15263 64 aa2.19□□□□□ -2.06
CASC4-208ENST00000559151 I3L2K1 104 aa2.18□□□□□ -2.06
CASC4-208ENST00000559151 K7EQZ3 153 aa2.18□□□□□ -2.06
CASC4-208ENST00000559151 APELAP0DMC3 54 aa2.17□□□□□ -2.06
CASC4-208ENST00000559151 SMIM2Q9BVW6 85 aa2.17□□□□□ -2.06
CASC4-208ENST00000559151 COX6B2Q6YFQ2 88 aa2.16□□□□□ -2.06
CASC4-208ENST00000559151 IAPPP10997 89 aa2.15□□□□□ -2.07
CASC4-208ENST00000559151 SPINK9Q5DT21 86 aa2.14□□□□□ -2.07
CASC4-208ENST00000559151 TMEM167AQ8TBQ9 72 aa2.14□□□□□ -2.07
CASC4-208ENST00000559151 K7EIM0 57 aa2.13□□□□□ -2.07
CASC4-208ENST00000559151 NDUFA1O15239 70 aa2.13□□□□□ -2.07
CASC4-208ENST00000559151 SPART-AS1P0CW21 52 aa2.13□□□□□ -2.07
CASC4-208ENST00000559151 DEFB131AP59861 70 aa2.13□□□□□ -2.07
CASC4-208ENST00000559151 KRTAP20-1Q3LI63 56 aa2.13□□□□□ -2.07
CASC4-208ENST00000559151 RHPN1-AS1Q9BWJ2 59 aa2.13□□□□□ -2.07
CASC4-208ENST00000559151 WT1-ASQ06250 92 aa2.11□□□□□ -2.07
CASC4-208ENST00000559151 A8MTW9 85 aa2.1□□□□□ -2.07
CASC4-208ENST00000559151 H0YAA0 97 aa2.1□□□□□ -2.07
CASC4-208ENST00000559151 PRCDQ00LT1 54 aa2.1□□□□□ -2.07
CASC4-208ENST00000559151 COX6A2Q02221 97 aa2.1□□□□□ -2.07
CASC4-208ENST00000559151 CNFNQ9BYD5 112 aa2.1□□□□□ -2.07
CASC4-208ENST00000559151 C6orf48Q9UBA6 75 aa2.1□□□□□ -2.07
CASC4-208ENST00000559151 HTN3P15516 51 aa2.09□□□□□ -2.07
CASC4-208ENST00000559151 H3BNG1 76 aa2.08□□□□□ -2.08
CASC4-208ENST00000559151 C10orf95Q9H7T3 257 aa2.08□□□□□ -2.08
CASC4-208ENST00000559151 A0A0D9SG42 100 aa2.07□□□□□ -2.08
CASC4-208ENST00000559151 KRTAP19-3Q7Z4W3 81 aa2.07□□□□□ -2.08
CASC4-208ENST00000559151 MUC17Q685J3 4493 aa2.07□□□□□ -2.08
CASC4-208ENST00000559151 DEFB1P60022 68 aa2.06□□□□□ -2.08
CASC4-208ENST00000559151 PRO0255Q9UI72 69 aa2.06□□□□□ -2.08
CASC4-208ENST00000559151 A0A096LPF7 62 aa2.05□□□□□ -2.08
CASC4-208ENST00000559151 DEFB130BP0DP73 79 aa2.05□□□□□ -2.08
CASC4-208ENST00000559151 DEFB130AP0DP74 79 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms