RNA–Protein interactions for RNA: ENST00000558583.2

SHISA9-203, Transcript of shisa family member 9, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SHISA9, Length 6,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-203ENST00000558583 BSNQ9UPA5 3926 aa6.74□□□□□ -1.33
SHISA9-203ENST00000558583 OTOGQ6ZRI0 2925 aa6.62□□□□□ -1.35
SHISA9-203ENST00000558583 AKAP9Q99996 3911 aa6.55□□□□□ -1.36
SHISA9-203ENST00000558583 SPRR2FQ96RM1 72 aa6.52□□□□□ -1.37
SHISA9-203ENST00000558583 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
SHISA9-203ENST00000558583 MT1HP80294 61 aa6.39□□□□□ -1.39
SHISA9-203ENST00000558583 KRTAP10-7P60409 375 aaPredicted RBP6.37□□□□□ -1.39
SHISA9-203ENST00000558583 SPRR2EP22531 72 aa6.28□□□□□ -1.4
SHISA9-203ENST00000558583 SPRR2BP35325 72 aa6.28□□□□□ -1.4
SHISA9-203ENST00000558583 SPRR2AP35326 72 aa6.28□□□□□ -1.4
SHISA9-203ENST00000558583 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.41
SHISA9-203ENST00000558583 KRTAP4-1Q9BYQ7 146 aa6.27□□□□□ -1.41
SHISA9-203ENST00000558583 DNAH1Q9P2D7 4330 aa6.24□□□□□ -1.41
SHISA9-203ENST00000558583 ZNF469Q96JG9 3925 aaPredicted RBP6.24□□□□□ -1.41
SHISA9-203ENST00000558583 DNAH9Q9NYC9 4486 aa6.22□□□□□ -1.41
SHISA9-203ENST00000558583 DNAH2Q9P225 4427 aa6.21□□□□□ -1.41
SHISA9-203ENST00000558583 DNAH10Q8IVF4 4471 aa6.2□□□□□ -1.42
SHISA9-203ENST00000558583 MT2AP02795 61 aa6.13□□□□□ -1.43
SHISA9-203ENST00000558583 FRAS1Q86XX4 4008 aa6.12□□□□□ -1.43
SHISA9-203ENST00000558583 KRTAP19-5Q3LI72 72 aa6.12□□□□□ -1.43
SHISA9-203ENST00000558583 DNAH8Q96JB1 4490 aa6.09□□□□□ -1.43
SHISA9-203ENST00000558583 SPRR2DP22532 72 aa6.06□□□□□ -1.44
SHISA9-203ENST00000558583 ANK2Q01484 3957 aa6.06□□□□□ -1.44
SHISA9-203ENST00000558583 MT1FP04733 61 aa6.04□□□□□ -1.44
SHISA9-203ENST00000558583 DNAH3Q8TD57 4116 aa5.97□□□□□ -1.45
SHISA9-203ENST00000558583 FAT2Q9NYQ8 4349 aa5.95□□□□□ -1.46
SHISA9-203ENST00000558583 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
SHISA9-203ENST00000558583 DNAH5Q8TE73 4624 aa5.92□□□□□ -1.46
SHISA9-203ENST00000558583 LCE3BQ5TA77 95 aa5.91□□□□□ -1.46
SHISA9-203ENST00000558583 PLECQ15149 4684 aaKnown RBP5.88□□□□□ -1.47
SHISA9-203ENST00000558583 DNAH11Q96DT5 4516 aa5.86□□□□□ -1.47
SHISA9-203ENST00000558583 LCE2BO14633 110 aa5.86□□□□□ -1.47
SHISA9-203ENST00000558583 KMT2AQ03164 3969 aa5.85□□□□□ -1.47
SHISA9-203ENST00000558583 VPS13BQ7Z7G8 4022 aa5.83□□□□□ -1.48
SHISA9-203ENST00000558583 SPRR2GQ9BYE4 73 aa5.82□□□□□ -1.48
SHISA9-203ENST00000558583 DNAH7Q8WXX0 4024 aa5.81□□□□□ -1.48
SHISA9-203ENST00000558583 DNAH17Q9UFH2 4485 aa5.76□□□□□ -1.49
SHISA9-203ENST00000558583 FAT1Q14517 4588 aa5.75□□□□□ -1.49
SHISA9-203ENST00000558583 MT1GP13640 62 aa5.74□□□□□ -1.49
SHISA9-203ENST00000558583 PRKDCP78527 4128 aaKnown RBP5.73□□□□□ -1.49
SHISA9-203ENST00000558583 CMYA5Q8N3K9 4069 aa5.71□□□□□ -1.5
SHISA9-203ENST00000558583 STARD9Q9P2P6 4700 aa5.68□□□□□ -1.5
SHISA9-203ENST00000558583 LRP1BQ9NZR2 4599 aa5.67□□□□□ -1.5
SHISA9-203ENST00000558583 LYSTQ99698 3801 aa5.67□□□□□ -1.5
SHISA9-203ENST00000558583 DYNC2H1Q8NCM8 4307 aaKnown RBP5.67□□□□□ -1.5
SHISA9-203ENST00000558583 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
SHISA9-203ENST00000558583 VPS13DQ5THJ4 4388 aa5.65□□□□□ -1.51
SHISA9-203ENST00000558583 KRTAP17-1Q9BYP8 105 aa5.63□□□□□ -1.51
SHISA9-203ENST00000558583 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
SHISA9-203ENST00000558583 LCE2CQ5TA81 110 aa5.59□□□□□ -1.52
SHISA9-203ENST00000558583 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.52
SHISA9-203ENST00000558583 APOBP04114 4563 aaKnown RBP5.58□□□□□ -1.52
SHISA9-203ENST00000558583 SACSQ9NZJ4 4579 aa5.56□□□□□ -1.52
SHISA9-203ENST00000558583 DNAH6Q9C0G6 4158 aa5.55□□□□□ -1.52
SHISA9-203ENST00000558583 MT4P47944 62 aa5.54□□□□□ -1.52
SHISA9-203ENST00000558583 LCE2DQ5TA82 110 aaPredicted RBP5.54□□□□□ -1.52
SHISA9-203ENST00000558583 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
SHISA9-203ENST00000558583 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
SHISA9-203ENST00000558583 DYNC1H1Q14204 4646 aaKnown RBP5.45□□□□□ -1.54
SHISA9-203ENST00000558583 MT1XP80297 61 aa5.38□□□□□ -1.55
SHISA9-203ENST00000558583 HECTD4Q9Y4D8 3996 aa5.37□□□□□ -1.55
SHISA9-203ENST00000558583 FAT3Q8TDW7 4589 aa5.34□□□□□ -1.55
SHISA9-203ENST00000558583 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
SHISA9-203ENST00000558583 DNHD1Q96M86 4753 aa5.32□□□□□ -1.56
SHISA9-203ENST00000558583 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
SHISA9-203ENST00000558583 PKHD1L1Q86WI1 4243 aa5.3□□□□□ -1.56
SHISA9-203ENST00000558583 KRTAP9-2Q9BYQ4 174 aa5.29□□□□□ -1.56
SHISA9-203ENST00000558583 LPAP08519 4548 aa5.28□□□□□ -1.56
SHISA9-203ENST00000558583 RYR1P21817 5038 aa5.28□□□□□ -1.56
SHISA9-203ENST00000558583 MYCBP2O75592 4640 aa5.27□□□□□ -1.57
SHISA9-203ENST00000558583 KRTAP19-8Q3LI54 63 aa5.26□□□□□ -1.57
SHISA9-203ENST00000558583 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
SHISA9-203ENST00000558583 MT1BP07438 61 aa5.23□□□□□ -1.57
SHISA9-203ENST00000558583 LCE1BQ5T7P3 118 aa5.21□□□□□ -1.57
SHISA9-203ENST00000558583 PKD1P98161 4303 aa5.19□□□□□ -1.58
SHISA9-203ENST00000558583 HSPG2P98160 4391 aa5.17□□□□□ -1.58
SHISA9-203ENST00000558583 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
SHISA9-203ENST00000558583 LRP1Q07954 4544 aaKnown RBP5.16□□□□□ -1.58
SHISA9-203ENST00000558583 KRTAP9-3Q9BYQ3 159 aa5.14□□□□□ -1.59
SHISA9-203ENST00000558583 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
SHISA9-203ENST00000558583 KRTAP19-3Q7Z4W3 81 aa5.09□□□□□ -1.59
SHISA9-203ENST00000558583 PRM1P04553 51 aa5.08□□□□□ -1.6
SHISA9-203ENST00000558583 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
SHISA9-203ENST00000558583 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
SHISA9-203ENST00000558583 KRTAP9-6A0A140TA67 174 aa5.08□□□□□ -1.6
SHISA9-203ENST00000558583 RYR3Q15413 4870 aa5.07□□□□□ -1.6
SHISA9-203ENST00000558583 PKHD1P08F94 4074 aa5.06□□□□□ -1.6
SHISA9-203ENST00000558583 KRTAP20-1Q3LI63 56 aa5□□□□□ -1.61
SHISA9-203ENST00000558583 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
SHISA9-203ENST00000558583 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
SHISA9-203ENST00000558583 KRTAP19-6Q3LI70 58 aa4.93□□□□□ -1.62
SHISA9-203ENST00000558583 TNXBP22105 4242 aa4.92□□□□□ -1.62
SHISA9-203ENST00000558583 MT1LQ93083 61 aa4.9□□□□□ -1.62
SHISA9-203ENST00000558583 MT3P25713 68 aa4.87□□□□□ -1.63
SHISA9-203ENST00000558583 MT1EP04732 61 aa4.86□□□□□ -1.63
SHISA9-203ENST00000558583 FLGP20930 4061 aaPredicted RBP4.85□□□□□ -1.63
SHISA9-203ENST00000558583 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.63
SHISA9-203ENST00000558583 HYDINQ4G0P3 5121 aa4.81□□□□□ -1.64
SHISA9-203ENST00000558583 MT1MQ8N339 61 aa4.8□□□□□ -1.64
SHISA9-203ENST00000558583 LRP2P98164 4655 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms