RNA–Protein interactions for RNA: ENST00000558456.5

LRRC49-210, Transcript of leucine rich repeat containing 49, humanhuman

TSL 3

Gene LRRC49, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-210ENST00000558456 CSPG4Q6UVK1 2322 aa1.66□□□□□ -2.14
LRRC49-210ENST00000558456 TLN2Q9Y4G6 2542 aa1.65□□□□□ -2.15
LRRC49-210ENST00000558456 HIVEP1P15822 2718 aa1.64□□□□□ -2.15
LRRC49-210ENST00000558456 KRTAP13-2Q52LG2 175 aa1.64□□□□□ -2.15
LRRC49-210ENST00000558456 DNHD1Q96M86 4753 aa1.64□□□□□ -2.15
LRRC49-210ENST00000558456 POLQO75417 2590 aa1.63□□□□□ -2.15
LRRC49-210ENST00000558456 CENPEQ02224 2701 aa1.63□□□□□ -2.15
LRRC49-210ENST00000558456 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
LRRC49-210ENST00000558456 R4GN34 69 aa1.63□□□□□ -2.15
LRRC49-210ENST00000558456 CUBNO60494 3623 aa1.63□□□□□ -2.15
LRRC49-210ENST00000558456 VPS13CQ709C8 3753 aa1.62□□□□□ -2.15
LRRC49-210ENST00000558456 NSD1Q96L73 2696 aaPredicted RBP1.62□□□□□ -2.15
LRRC49-210ENST00000558456 ZANQ9Y493 2812 aa1.62□□□□□ -2.15
LRRC49-210ENST00000558456 ACANP16112 2415 aa1.62□□□□□ -2.15
LRRC49-210ENST00000558456 ITPR3Q14573 2671 aa1.62□□□□□ -2.15
LRRC49-210ENST00000558456 FN1P02751 2386 aaKnown RBP1.61□□□□□ -2.15
LRRC49-210ENST00000558456 NF1P21359 2839 aa1.61□□□□□ -2.15
LRRC49-210ENST00000558456 FLNAP21333 2647 aaKnown RBP1.6□□□□□ -2.15
LRRC49-210ENST00000558456 CCDC168Q8NDH2 2452 aa1.6□□□□□ -2.15
LRRC49-210ENST00000558456 MTORP42345 2549 aa1.6□□□□□ -2.15
LRRC49-210ENST00000558456 JMJD1CQ15652 2540 aa1.6□□□□□ -2.15
LRRC49-210ENST00000558456 KRTAP12-1P59990 96 aa1.6□□□□□ -2.15
LRRC49-210ENST00000558456 SETD2Q9BYW2 2564 aaPredicted RBP1.58□□□□□ -2.16
LRRC49-210ENST00000558456 FLG2Q5D862 2391 aaPredicted RBP1.58□□□□□ -2.16
LRRC49-210ENST00000558456 SVEP1Q4LDE5 3571 aa1.58□□□□□ -2.16
LRRC49-210ENST00000558456 KRTAP13-4Q3LI77 160 aa1.57□□□□□ -2.16
LRRC49-210ENST00000558456 SONP18583 2426 aaKnown RBP1.56□□□□□ -2.16
LRRC49-210ENST00000558456 J3QKU1 62 aa1.56□□□□□ -2.16
LRRC49-210ENST00000558456 CMYA5Q8N3K9 4069 aa1.56□□□□□ -2.16
LRRC49-210ENST00000558456 NBEAL2Q6ZNJ1 2754 aa1.56□□□□□ -2.16
LRRC49-210ENST00000558456 FBN1P35555 2871 aaKnown RBP1.55□□□□□ -2.16
LRRC49-210ENST00000558456 PRKDCP78527 4128 aaKnown RBP1.55□□□□□ -2.16
LRRC49-210ENST00000558456 Q5VSD8 79 aa1.55□□□□□ -2.16
LRRC49-210ENST00000558456 ANK2Q01484 3957 aa1.55□□□□□ -2.16
LRRC49-210ENST00000558456 FBN3Q75N90 2809 aa1.55□□□□□ -2.16
LRRC49-210ENST00000558456 C9orf92A6NGG3 77 aa1.54□□□□□ -2.16
LRRC49-210ENST00000558456 NIPBLQ6KC79 2804 aaeCLIP1.53□□□□□ -2.16
LRRC49-210ENST00000558456 DNAH1Q9P2D7 4330 aa1.53□□□□□ -2.16
LRRC49-210ENST00000558456 STAB1Q9NY15 2570 aa1.53□□□□□ -2.17
LRRC49-210ENST00000558456 MXRA5Q9NR99 2828 aa1.52□□□□□ -2.17
LRRC49-210ENST00000558456 TENM1Q9UKZ4 2725 aa1.52□□□□□ -2.17
LRRC49-210ENST00000558456 TNP1P09430 55 aa1.52□□□□□ -2.17
LRRC49-210ENST00000558456 COL6A5A8TX70 2615 aa1.51□□□□□ -2.17
LRRC49-210ENST00000558456 ATRQ13535 2644 aa1.51□□□□□ -2.17
LRRC49-210ENST00000558456 VPS13DQ5THJ4 4388 aa1.51□□□□□ -2.17
LRRC49-210ENST00000558456 NBEAL1Q6ZS30 2694 aa1.51□□□□□ -2.17
LRRC49-210ENST00000558456 MGAM2Q2M2H8 2515 aa1.5□□□□□ -2.17
LRRC49-210ENST00000558456 TRRAPQ9Y4A5 3859 aa1.5□□□□□ -2.17
LRRC49-210ENST00000558456 DNAH3Q8TD57 4116 aa1.5□□□□□ -2.17
LRRC49-210ENST00000558456 KRTAP21-3Q3LHN1 58 aa1.5□□□□□ -2.17
LRRC49-210ENST00000558456 PKD1L1Q8TDX9 2849 aa1.49□□□□□ -2.17
LRRC49-210ENST00000558456 VWFP04275 2813 aa1.48□□□□□ -2.17
LRRC49-210ENST00000558456 TGP01266 2768 aa1.48□□□□□ -2.17
LRRC49-210ENST00000558456 SRRM2Q9UQ35 2752 aaKnown RBP1.48□□□□□ -2.17
LRRC49-210ENST00000558456 MEGF8Q7Z7M0 2845 aa1.48□□□□□ -2.17
LRRC49-210ENST00000558456 FRAS1Q86XX4 4008 aa1.48□□□□□ -2.17
LRRC49-210ENST00000558456 DNAH9Q9NYC9 4486 aa1.48□□□□□ -2.17
LRRC49-210ENST00000558456 KRTAP12-3P60328 96 aa1.47□□□□□ -2.17
LRRC49-210ENST00000558456 SMR3AQ99954 134 aa1.47□□□□□ -2.17
LRRC49-210ENST00000558456 DYNC2H1Q8NCM8 4307 aaKnown RBP1.47□□□□□ -2.17
LRRC49-210ENST00000558456 LYSTQ99698 3801 aa1.46□□□□□ -2.18
LRRC49-210ENST00000558456 COL7A1Q02388 2944 aa1.46□□□□□ -2.18
LRRC49-210ENST00000558456 KMT2CQ8NEZ4 4911 aaKnown RBP1.45□□□□□ -2.18
LRRC49-210ENST00000558456 SACSQ9NZJ4 4579 aa1.45□□□□□ -2.18
LRRC49-210ENST00000558456 RYR3Q15413 4870 aa1.44□□□□□ -2.18
LRRC49-210ENST00000558456 KRTAP12-4P60329 112 aa1.44□□□□□ -2.18
LRRC49-210ENST00000558456 HUWE1Q7Z6Z7 4374 aaKnown RBP1.44□□□□□ -2.18
LRRC49-210ENST00000558456 NOTCH1P46531 2555 aa1.44□□□□□ -2.18
LRRC49-210ENST00000558456 DNAH7Q8WXX0 4024 aa1.43□□□□□ -2.18
LRRC49-210ENST00000558456 TENM3Q9P273 2699 aa1.42□□□□□ -2.18
LRRC49-210ENST00000558456 DNAH8Q96JB1 4490 aa1.42□□□□□ -2.18
LRRC49-210ENST00000558456 DNAH6Q9C0G6 4158 aa1.42□□□□□ -2.18
LRRC49-210ENST00000558456 HYDINQ4G0P3 5121 aa1.41□□□□□ -2.18
LRRC49-210ENST00000558456 HECTD4Q9Y4D8 3996 aa1.41□□□□□ -2.18
LRRC49-210ENST00000558456 KRTAP6-3Q3LI67 103 aa1.41□□□□□ -2.18
LRRC49-210ENST00000558456 CSMD3Q7Z407 3707 aa1.41□□□□□ -2.18
LRRC49-210ENST00000558456 STAB2Q8WWQ8 2551 aa1.41□□□□□ -2.18
LRRC49-210ENST00000558456 EPPK1P58107 5090 aaKnown RBP1.4□□□□□ -2.18
LRRC49-210ENST00000558456 RYR2Q92736 4967 aa1.4□□□□□ -2.19
LRRC49-210ENST00000558456 DNAH17Q9UFH2 4485 aa1.4□□□□□ -2.19
LRRC49-210ENST00000558456 CRCT1Q9UGL9 99 aa1.4□□□□□ -2.19
LRRC49-210ENST00000558456 STARD9Q9P2P6 4700 aa1.4□□□□□ -2.19
LRRC49-210ENST00000558456 DNAH10Q8IVF4 4471 aa1.4□□□□□ -2.19
LRRC49-210ENST00000558456 DNAH11Q96DT5 4516 aa1.39□□□□□ -2.19
LRRC49-210ENST00000558456 DMBT1Q9UGM3 2413 aaPredicted RBP1.38□□□□□ -2.19
LRRC49-210ENST00000558456 DNAH2Q9P225 4427 aa1.37□□□□□ -2.19
LRRC49-210ENST00000558456 PLECQ15149 4684 aaKnown RBP1.37□□□□□ -2.19
LRRC49-210ENST00000558456 KRTAP4-1Q9BYQ7 146 aa1.36□□□□□ -2.19
LRRC49-210ENST00000558456 BIRC6Q9NR09 4857 aa1.35□□□□□ -2.19
LRRC49-210ENST00000558456 FAT2Q9NYQ8 4349 aa1.35□□□□□ -2.19
LRRC49-210ENST00000558456 DYNC1H1Q14204 4646 aaKnown RBP1.35□□□□□ -2.19
LRRC49-210ENST00000558456 MYCBP2O75592 4640 aa1.34□□□□□ -2.19
LRRC49-210ENST00000558456 KMT2AQ03164 3969 aa1.34□□□□□ -2.2
LRRC49-210ENST00000558456 KIAA1109Q2LD37 5005 aa1.33□□□□□ -2.2
LRRC49-210ENST00000558456 HERC2O95714 4834 aa1.32□□□□□ -2.2
LRRC49-210ENST00000558456 PKHD1P08F94 4074 aa1.32□□□□□ -2.2
LRRC49-210ENST00000558456 PCLOQ9Y6V0 5065 aa1.31□□□□□ -2.2
LRRC49-210ENST00000558456 PKD1P98161 4303 aa1.31□□□□□ -2.2
LRRC49-210ENST00000558456 HSPG2P98160 4391 aa1.31□□□□□ -2.2
LRRC49-210ENST00000558456 APOBP04114 4563 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms