RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 OTOGQ6ZRI0 2925 aa5.98□□□□□ -1.45
SPG11-210ENST00000558319 KRTAP8-1Q8IUC2 63 aa5.89□□□□□ -1.47
SPG11-210ENST00000558319 ALMS1Q8TCU4 4167 aa5.88□□□□□ -1.47
SPG11-210ENST00000558319 ZNF469Q96JG9 3925 aaPredicted RBP5.83□□□□□ -1.48
SPG11-210ENST00000558319 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
SPG11-210ENST00000558319 KRTAP10-4P60372 401 aaPredicted RBP5.77□□□□□ -1.49
SPG11-210ENST00000558319 DNAH9Q9NYC9 4486 aa5.66□□□□□ -1.5
SPG11-210ENST00000558319 DNAH1Q9P2D7 4330 aa5.64□□□□□ -1.51
SPG11-210ENST00000558319 KRTAP4-1Q9BYQ7 146 aa5.63□□□□□ -1.51
SPG11-210ENST00000558319 DNAH10Q8IVF4 4471 aa5.63□□□□□ -1.51
SPG11-210ENST00000558319 DNAH2Q9P225 4427 aa5.56□□□□□ -1.52
SPG11-210ENST00000558319 SPRR2FQ96RM1 72 aa5.56□□□□□ -1.52
SPG11-210ENST00000558319 MT1HP80294 61 aa5.54□□□□□ -1.52
SPG11-210ENST00000558319 FRAS1Q86XX4 4008 aa5.53□□□□□ -1.52
SPG11-210ENST00000558319 ANK2Q01484 3957 aa5.5□□□□□ -1.53
SPG11-210ENST00000558319 DNAH5Q8TE73 4624 aa5.45□□□□□ -1.54
SPG11-210ENST00000558319 KRTAP19-5Q3LI72 72 aa5.43□□□□□ -1.54
SPG11-210ENST00000558319 PLECQ15149 4684 aaKnown RBP5.41□□□□□ -1.54
SPG11-210ENST00000558319 KMT2AQ03164 3969 aa5.41□□□□□ -1.54
SPG11-210ENST00000558319 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
SPG11-210ENST00000558319 DNAH8Q96JB1 4490 aa5.39□□□□□ -1.55
SPG11-210ENST00000558319 MT2AP02795 61 aa5.38□□□□□ -1.55
SPG11-210ENST00000558319 VPS13BQ7Z7G8 4022 aa5.38□□□□□ -1.55
SPG11-210ENST00000558319 DNAH3Q8TD57 4116 aa5.37□□□□□ -1.55
SPG11-210ENST00000558319 DNAH11Q96DT5 4516 aa5.36□□□□□ -1.55
SPG11-210ENST00000558319 MT1FP04733 61 aa5.34□□□□□ -1.55
SPG11-210ENST00000558319 FAT2Q9NYQ8 4349 aa5.31□□□□□ -1.56
SPG11-210ENST00000558319 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
SPG11-210ENST00000558319 SPRR2EP22531 72 aa5.26□□□□□ -1.57
SPG11-210ENST00000558319 SPRR2BP35325 72 aa5.26□□□□□ -1.57
SPG11-210ENST00000558319 SPRR2AP35326 72 aa5.26□□□□□ -1.57
SPG11-210ENST00000558319 STARD9Q9P2P6 4700 aa5.26□□□□□ -1.57
SPG11-210ENST00000558319 LYSTQ99698 3801 aa5.25□□□□□ -1.57
SPG11-210ENST00000558319 DNAH17Q9UFH2 4485 aa5.25□□□□□ -1.57
SPG11-210ENST00000558319 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
SPG11-210ENST00000558319 LRP1BQ9NZR2 4599 aa5.23□□□□□ -1.57
SPG11-210ENST00000558319 CMYA5Q8N3K9 4069 aa5.22□□□□□ -1.57
SPG11-210ENST00000558319 FAT1Q14517 4588 aa5.21□□□□□ -1.57
SPG11-210ENST00000558319 SPRR2GQ9BYE4 73 aa5.16□□□□□ -1.58
SPG11-210ENST00000558319 VPS13DQ5THJ4 4388 aa5.15□□□□□ -1.58
SPG11-210ENST00000558319 PRKDCP78527 4128 aaKnown RBP5.14□□□□□ -1.59
SPG11-210ENST00000558319 SACSQ9NZJ4 4579 aa5.14□□□□□ -1.59
SPG11-210ENST00000558319 DNAH7Q8WXX0 4024 aa5.11□□□□□ -1.59
SPG11-210ENST00000558319 MT1GP13640 62 aa5.1□□□□□ -1.59
SPG11-210ENST00000558319 DYNC2H1Q8NCM8 4307 aaKnown RBP5.09□□□□□ -1.59
SPG11-210ENST00000558319 DNAH6Q9C0G6 4158 aa5.07□□□□□ -1.6
SPG11-210ENST00000558319 DYNC1H1Q14204 4646 aaKnown RBP5.05□□□□□ -1.6
SPG11-210ENST00000558319 SPRR2DP22532 72 aa5.05□□□□□ -1.6
SPG11-210ENST00000558319 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
SPG11-210ENST00000558319 APOBP04114 4563 aaKnown RBP5.01□□□□□ -1.61
SPG11-210ENST00000558319 KRTAP4-8A0A0G2JLE6 195 aa4.98□□□□□ -1.61
SPG11-210ENST00000558319 KRTAP4-8Q9BYQ9 185 aa4.98□□□□□ -1.61
SPG11-210ENST00000558319 DNHD1Q96M86 4753 aa4.98□□□□□ -1.61
SPG11-210ENST00000558319 KRTAP17-1Q9BYP8 105 aa4.97□□□□□ -1.61
SPG11-210ENST00000558319 RYR1P21817 5038 aa4.95□□□□□ -1.62
SPG11-210ENST00000558319 LPAP08519 4548 aa4.92□□□□□ -1.62
SPG11-210ENST00000558319 LCE2BO14633 110 aa4.92□□□□□ -1.62
SPG11-210ENST00000558319 FAT3Q8TDW7 4589 aa4.87□□□□□ -1.63
SPG11-210ENST00000558319 HECTD4Q9Y4D8 3996 aa4.84□□□□□ -1.64
SPG11-210ENST00000558319 MYCBP2O75592 4640 aa4.83□□□□□ -1.64
SPG11-210ENST00000558319 MT1XP80297 61 aa4.81□□□□□ -1.64
SPG11-210ENST00000558319 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
SPG11-210ENST00000558319 KRTAP19-1Q8IUB9 90 aa4.77□□□□□ -1.65
SPG11-210ENST00000558319 LRP1Q07954 4544 aaKnown RBP4.76□□□□□ -1.65
SPG11-210ENST00000558319 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
SPG11-210ENST00000558319 MT4P47944 62 aa4.71□□□□□ -1.65
SPG11-210ENST00000558319 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
SPG11-210ENST00000558319 PKD1P98161 4303 aa4.69□□□□□ -1.66
SPG11-210ENST00000558319 MT1BP07438 61 aa4.68□□□□□ -1.66
SPG11-210ENST00000558319 HSPG2P98160 4391 aa4.68□□□□□ -1.66
SPG11-210ENST00000558319 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
SPG11-210ENST00000558319 RYR3Q15413 4870 aa4.65□□□□□ -1.66
SPG11-210ENST00000558319 LCE2CQ5TA81 110 aa4.65□□□□□ -1.67
SPG11-210ENST00000558319 LCE3EQ5T5B0 92 aa4.65□□□□□ -1.67
SPG11-210ENST00000558319 KRTAP19-8Q3LI54 63 aa4.64□□□□□ -1.67
SPG11-210ENST00000558319 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
SPG11-210ENST00000558319 LCE2DQ5TA82 110 aaPredicted RBP4.63□□□□□ -1.67
SPG11-210ENST00000558319 PKHD1P08F94 4074 aa4.6□□□□□ -1.67
SPG11-210ENST00000558319 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
SPG11-210ENST00000558319 PRM1P04553 51 aa4.53□□□□□ -1.68
SPG11-210ENST00000558319 KRTAP9-3Q9BYQ3 159 aa4.52□□□□□ -1.69
SPG11-210ENST00000558319 PKHD1L1Q86WI1 4243 aa4.51□□□□□ -1.69
SPG11-210ENST00000558319 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
SPG11-210ENST00000558319 KRTAP4-3Q9BYR4 195 aa4.5□□□□□ -1.69
SPG11-210ENST00000558319 TNXBP22105 4242 aa4.44□□□□□ -1.7
SPG11-210ENST00000558319 HYDINQ4G0P3 5121 aa4.44□□□□□ -1.7
SPG11-210ENST00000558319 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
SPG11-210ENST00000558319 KRTAP19-3Q7Z4W3 81 aa4.42□□□□□ -1.7
SPG11-210ENST00000558319 LRP2P98164 4655 aa4.41□□□□□ -1.7
SPG11-210ENST00000558319 MT1LQ93083 61 aa4.36□□□□□ -1.71
SPG11-210ENST00000558319 KRTAP9-2Q9BYQ4 174 aa4.32□□□□□ -1.72
SPG11-210ENST00000558319 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
SPG11-210ENST00000558319 MT1EP04732 61 aa4.31□□□□□ -1.72
SPG11-210ENST00000558319 KIAA1109Q2LD37 5005 aa4.3□□□□□ -1.72
SPG11-210ENST00000558319 FLGP20930 4061 aaPredicted RBP4.28□□□□□ -1.72
SPG11-210ENST00000558319 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
SPG11-210ENST00000558319 MT1MQ8N339 61 aa4.23□□□□□ -1.73
SPG11-210ENST00000558319 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
SPG11-210ENST00000558319 MT3P25713 68 aa4.18□□□□□ -1.74
SPG11-210ENST00000558319 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms