RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 DNAL4O96015 105 aa2.58□□□□□ -2
SPG11-208ENST00000558155 A8MUU9 505 aa2.57□□□□□ -2
SPG11-208ENST00000558155 IGFL1Q6UW32 110 aa2.57□□□□□ -2
SPG11-208ENST00000558155 SPTSSBQ8NFR3 76 aa2.57□□□□□ -2
SPG11-208ENST00000558155 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
SPG11-208ENST00000558155 CASC2Q6XLA1 102 aa2.55□□□□□ -2
SPG11-208ENST00000558155 LITAFQ99732 161 aa2.55□□□□□ -2
SPG11-208ENST00000558155 hDV103S1A0JD37 113 aa2.54□□□□□ -2
SPG11-208ENST00000558155 HCG22E2RYF7 251 aa2.54□□□□□ -2
SPG11-208ENST00000558155 CHKB-CPT1BH3BT56 60 aa2.54□□□□□ -2
SPG11-208ENST00000558155 KRTAP20-1Q3LI63 56 aa2.54□□□□□ -2
SPG11-208ENST00000558155 FAM218AQ96MZ4 157 aa2.54□□□□□ -2
SPG11-208ENST00000558155 CDC42SE1Q9NRR8 79 aa2.54□□□□□ -2
SPG11-208ENST00000558155 TRAV22A0A0B4J277 110 aa2.53□□□□□ -2
SPG11-208ENST00000558155 KRTAP16-1A8MUX0 517 aa2.53□□□□□ -2
SPG11-208ENST00000558155 MUSTN1Q8IVN3 82 aa2.53□□□□□ -2
SPG11-208ENST00000558155 K7ERS5 55 aa2.52□□□□□ -2.01
SPG11-208ENST00000558155 HRES1P13985 223 aa2.52□□□□□ -2.01
SPG11-208ENST00000558155 A6NED7 52 aa2.51□□□□□ -2.01
SPG11-208ENST00000558155 A8MWP4 228 aa2.51□□□□□ -2.01
SPG11-208ENST00000558155 DSCR10P59022 87 aa2.51□□□□□ -2.01
SPG11-208ENST00000558155 LINC00575Q6W349 94 aa2.51□□□□□ -2.01
SPG11-208ENST00000558155 SMIM11BQ8TCY0 68 aa2.51□□□□□ -2.01
SPG11-208ENST00000558155 TTTY13Q9BZ97 58 aa2.51□□□□□ -2.01
SPG11-208ENST00000558155 IGKV3D-7A0A0C4DH55 119 aa2.5□□□□□ -2.01
SPG11-208ENST00000558155 Q6ZQY7 126 aa2.5□□□□□ -2.01
SPG11-208ENST00000558155 KRTAP2-2Q9BYT5 123 aa2.5□□□□□ -2.01
SPG11-208ENST00000558155 UBL5Q9BZL1 73 aa2.5□□□□□ -2.01
SPG11-208ENST00000558155 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.49□□□□□ -2.01
SPG11-208ENST00000558155 Q8N9P0 234 aaPredicted RBP2.49□□□□□ -2.01
SPG11-208ENST00000558155 TMEM254Q8TBM7 123 aa2.49□□□□□ -2.01
SPG11-208ENST00000558155 A0A087WVE0 104 aa2.48□□□□□ -2.01
SPG11-208ENST00000558155 NDUFB1O75438 58 aa2.48□□□□□ -2.01
SPG11-208ENST00000558155 Q5VV11 94 aa2.48□□□□□ -2.01
SPG11-208ENST00000558155 SNURFQ9Y675 71 aa2.48□□□□□ -2.01
SPG11-208ENST00000558155 A0A087WSZ3 146 aa2.47□□□□□ -2.01
SPG11-208ENST00000558155 TRBV7-4A0A0J9YYF1 115 aa2.47□□□□□ -2.01
SPG11-208ENST00000558155 BAALC-AS2P0C853 105 aa2.47□□□□□ -2.01
SPG11-208ENST00000558155 NEBP20929 6669 aa2.46□□□□□ -2.02
SPG11-208ENST00000558155 JMJD7-PLA2G4BH0Y9G9 81 aa2.46□□□□□ -2.02
SPG11-208ENST00000558155 PRR15LQ9BU68 103 aa2.46□□□□□ -2.02
SPG11-208ENST00000558155 C14orf132Q9NPU4 83 aa2.46□□□□□ -2.02
SPG11-208ENST00000558155 LOC101927531A0A1B0GV80 90 aa2.45□□□□□ -2.02
SPG11-208ENST00000558155 IGKV4-1P06312 121 aa2.45□□□□□ -2.02
SPG11-208ENST00000558155 NREPQ16612 68 aa2.45□□□□□ -2.02
SPG11-208ENST00000558155 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
SPG11-208ENST00000558155 KRTAP2-3P0C7H8 128 aa2.44□□□□□ -2.02
SPG11-208ENST00000558155 SPINK7P58062 85 aa2.44□□□□□ -2.02
SPG11-208ENST00000558155 C1orf64Q8NEQ6 169 aa2.44□□□□□ -2.02
SPG11-208ENST00000558155 KRTAP2-4Q9BYR9 128 aa2.44□□□□□ -2.02
SPG11-208ENST00000558155 OCR1Q9BZK8 76 aa2.44□□□□□ -2.02
SPG11-208ENST00000558155 ORMDL1Q9P0S3 153 aa2.44□□□□□ -2.02
SPG11-208ENST00000558155 ROMO1P60602 79 aa2.43□□□□□ -2.02
SPG11-208ENST00000558155 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
SPG11-208ENST00000558155 CAMK2N1Q7Z7J9 78 aa2.43□□□□□ -2.02
SPG11-208ENST00000558155 H0YGX0 51 aa2.42□□□□□ -2.02
SPG11-208ENST00000558155 PDE6GP18545 87 aa2.42□□□□□ -2.02
SPG11-208ENST00000558155 ZCCHC13Q8WW36 166 aaKnown RBP2.42□□□□□ -2.02
SPG11-208ENST00000558155 C8orf17Q9NRJ1 99 aa2.42□□□□□ -2.02
SPG11-208ENST00000558155 H3BQ85 93 aa2.41□□□□□ -2.02
SPG11-208ENST00000558155 KRTAP5-9P26371 169 aa2.41□□□□□ -2.02
SPG11-208ENST00000558155 A0A1W2PNM2 257 aa2.4□□□□□ -2.03
SPG11-208ENST00000558155 BPY2O14599 106 aa2.4□□□□□ -2.03
SPG11-208ENST00000558155 MIR22HGQ0VDD5 57 aa2.4□□□□□ -2.03
SPG11-208ENST00000558155 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
SPG11-208ENST00000558155 Q6ZQT0 140 aa2.4□□□□□ -2.03
SPG11-208ENST00000558155 WFDC13Q8IUB5 93 aa2.4□□□□□ -2.03
SPG11-208ENST00000558155 DEFB116Q30KQ4 102 aa2.39□□□□□ -2.03
SPG11-208ENST00000558155 H1FX-AS1Q4G0G2 97 aa2.39□□□□□ -2.03
SPG11-208ENST00000558155 PRAC1Q96KF2 57 aa2.39□□□□□ -2.03
SPG11-208ENST00000558155 LINC00208Q96KT6 92 aa2.39□□□□□ -2.03
SPG11-208ENST00000558155 LINC00472Q9H8W2 130 aa2.39□□□□□ -2.03
SPG11-208ENST00000558155 MUC12Q9UKN1 5478 aa2.39□□□□□ -2.03
SPG11-208ENST00000558155 SPANXA2-OT1Q8N9U9 137 aa2.38□□□□□ -2.03
SPG11-208ENST00000558155 A0A1B0GVX0 72 aa2.37□□□□□ -2.03
SPG11-208ENST00000558155 H3BPC8 53 aa2.37□□□□□ -2.03
SPG11-208ENST00000558155 LINC01558Q9Y6Z2 57 aa2.37□□□□□ -2.03
SPG11-208ENST00000558155 KRTAP10-5P60370 271 aa2.36□□□□□ -2.03
SPG11-208ENST00000558155 ADM2Q7Z4H4 148 aa2.36□□□□□ -2.03
SPG11-208ENST00000558155 LOC110117498A0A087WWA1 95 aa2.35□□□□□ -2.03
SPG11-208ENST00000558155 A8MU10 97 aa2.35□□□□□ -2.03
SPG11-208ENST00000558155 MT1BP07438 61 aa2.35□□□□□ -2.03
SPG11-208ENST00000558155 CSAG1Q6PB30 78 aa2.35□□□□□ -2.03
SPG11-208ENST00000558155 DMAC1Q96GE9 116 aa2.35□□□□□ -2.03
SPG11-208ENST00000558155 KRTAP2-1Q9BYU5 128 aa2.35□□□□□ -2.03
SPG11-208ENST00000558155 H0Y9P7 68 aa2.34□□□□□ -2.03
SPG11-208ENST00000558155 KRTAP19-8Q3LI54 63 aa2.33□□□□□ -2.04
SPG11-208ENST00000558155 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
SPG11-208ENST00000558155 UQCR11O14957 56 aa2.32□□□□□ -2.04
SPG11-208ENST00000558155 SPRR2EP22531 72 aa2.32□□□□□ -2.04
SPG11-208ENST00000558155 SPRR2BP35325 72 aa2.32□□□□□ -2.04
SPG11-208ENST00000558155 SPRR2AP35326 72 aa2.32□□□□□ -2.04
SPG11-208ENST00000558155 KRTAP5-4Q6L8H1 288 aa2.32□□□□□ -2.04
SPG11-208ENST00000558155 SPRR2GQ9BYE4 73 aa2.31□□□□□ -2.04
SPG11-208ENST00000558155 SPRR2FQ96RM1 72 aa2.3□□□□□ -2.04
SPG11-208ENST00000558155 KMT2DO14686 5537 aa2.3□□□□□ -2.04
SPG11-208ENST00000558155 KRTAP25-1Q3LHN0 102 aa2.29□□□□□ -2.04
SPG11-208ENST00000558155 IGKV2D-30A0A075B6S6 120 aa2.27□□□□□ -2.05
SPG11-208ENST00000558155 IGKV2-30P06310 120 aa2.27□□□□□ -2.05
SPG11-208ENST00000558155 SPATA8Q6RVD6 105 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 1289.7 ms