RNA–Protein interactions for RNA: ENST00000558031.5

CRNDE-204, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-204ENST00000558031 LAMA5O15230 3695 aa1.26□□□□□ -2.21
CRNDE-204ENST00000558031 UTP20O75691 2785 aaKnown RBP1.25□□□□□ -2.21
CRNDE-204ENST00000558031 PKD1P98161 4303 aa1.25□□□□□ -2.21
CRNDE-204ENST00000558031 FCGBPQ9Y6R7 5405 aaPredicted RBP1.25□□□□□ -2.21
CRNDE-204ENST00000558031 CELSR3Q9NYQ7 3312 aa1.25□□□□□ -2.21
CRNDE-204ENST00000558031 KRTAP8-1Q8IUC2 63 aa1.25□□□□□ -2.21
CRNDE-204ENST00000558031 Q9Y3F1 56 aa1.25□□□□□ -2.21
CRNDE-204ENST00000558031 HIVEP1P15822 2718 aa1.24□□□□□ -2.21
CRNDE-204ENST00000558031 HSPG2P98160 4391 aa1.24□□□□□ -2.21
CRNDE-204ENST00000558031 FAT3Q8TDW7 4589 aa1.24□□□□□ -2.21
CRNDE-204ENST00000558031 SPTBN5Q9NRC6 3674 aaKnown RBP1.24□□□□□ -2.21
CRNDE-204ENST00000558031 DCHS1Q96JQ0 3298 aa1.24□□□□□ -2.21
CRNDE-204ENST00000558031 CHD8Q9HCK8 2581 aa1.24□□□□□ -2.21
CRNDE-204ENST00000558031 DNAH6Q9C0G6 4158 aa1.24□□□□□ -2.21
CRNDE-204ENST00000558031 CSMD1Q96PZ7 3565 aa1.23□□□□□ -2.21
CRNDE-204ENST00000558031 TRRAPQ9Y4A5 3859 aa1.23□□□□□ -2.21
CRNDE-204ENST00000558031 NBEAL2Q6ZNJ1 2754 aa1.23□□□□□ -2.21
CRNDE-204ENST00000558031 PRM1P04553 51 aa1.23□□□□□ -2.21
CRNDE-204ENST00000558031 KRTAP21-3Q3LHN1 58 aa1.23□□□□□ -2.21
CRNDE-204ENST00000558031 NSD1Q96L73 2696 aaPredicted RBP1.23□□□□□ -2.21
CRNDE-204ENST00000558031 DNAH1Q9P2D7 4330 aa1.23□□□□□ -2.21
CRNDE-204ENST00000558031 SETXQ7Z333 2677 aaKnown RBP1.22□□□□□ -2.21
CRNDE-204ENST00000558031 HUWE1Q7Z6Z7 4374 aaKnown RBP1.22□□□□□ -2.21
CRNDE-204ENST00000558031 ZANQ9Y493 2812 aa1.21□□□□□ -2.22
CRNDE-204ENST00000558031 ANKHD1Q8IWZ3 2542 aaKnown RBP1.21□□□□□ -2.22
CRNDE-204ENST00000558031 PLECQ15149 4684 aaKnown RBP1.21□□□□□ -2.22
CRNDE-204ENST00000558031 SPG11Q96JI7 2443 aa1.2□□□□□ -2.22
CRNDE-204ENST00000558031 DEFB133Q30KQ1 61 aa1.2□□□□□ -2.22
CRNDE-204ENST00000558031 CUBNO60494 3623 aa1.2□□□□□ -2.22
CRNDE-204ENST00000558031 SPEGQ15772 3267 aa1.2□□□□□ -2.22
CRNDE-204ENST00000558031 SONP18583 2426 aaKnown RBP1.2□□□□□ -2.22
CRNDE-204ENST00000558031 USP9XQ93008 2570 aaPredicted RBP1.2□□□□□ -2.22
CRNDE-204ENST00000558031 FREM2Q5SZK8 3169 aa1.2□□□□□ -2.22
CRNDE-204ENST00000558031 GOLGB1Q14789 3259 aaKnown RBP1.2□□□□□ -2.22
CRNDE-204ENST00000558031 APOBP04114 4563 aaKnown RBP1.19□□□□□ -2.22
CRNDE-204ENST00000558031 WDFY4Q6ZS81 3184 aa1.19□□□□□ -2.22
CRNDE-204ENST00000558031 MXRA5Q9NR99 2828 aa1.19□□□□□ -2.22
CRNDE-204ENST00000558031 KALRNO60229 2985 aa1.19□□□□□ -2.22
CRNDE-204ENST00000558031 TGP01266 2768 aa1.19□□□□□ -2.22
CRNDE-204ENST00000558031 MUC3AQ02505 3323 aa1.18□□□□□ -2.22
CRNDE-204ENST00000558031 RPS29P62273 56 aaKnown RBP1.18□□□□□ -2.22
CRNDE-204ENST00000558031 PKHD1P08F94 4074 aa1.18□□□□□ -2.22
CRNDE-204ENST00000558031 DNAH9Q9NYC9 4486 aa1.18□□□□□ -2.22
CRNDE-204ENST00000558031 CFAP46Q8IYW2 2715 aa1.18□□□□□ -2.22
CRNDE-204ENST00000558031 ITPR2Q14571 2701 aa1.17□□□□□ -2.22
CRNDE-204ENST00000558031 DNAH5Q8TE73 4624 aa1.17□□□□□ -2.22
CRNDE-204ENST00000558031 DNAH17Q9UFH2 4485 aa1.17□□□□□ -2.22
CRNDE-204ENST00000558031 FBN3Q75N90 2809 aa1.16□□□□□ -2.22
CRNDE-204ENST00000558031 PKD1L1Q8TDX9 2849 aa1.16□□□□□ -2.22
CRNDE-204ENST00000558031 MTORP42345 2549 aa1.16□□□□□ -2.22
CRNDE-204ENST00000558031 LRP1Q07954 4544 aaKnown RBP1.16□□□□□ -2.22
CRNDE-204ENST00000558031 TEP1Q99973 2627 aaKnown RBP1.16□□□□□ -2.22
CRNDE-204ENST00000558031 SVEP1Q4LDE5 3571 aa1.16□□□□□ -2.22
CRNDE-204ENST00000558031 HTN3P15516 51 aa1.15□□□□□ -2.23
CRNDE-204ENST00000558031 UTRNP46939 3433 aa1.15□□□□□ -2.23
CRNDE-204ENST00000558031 LAMA3Q16787 3333 aa1.14□□□□□ -2.23
CRNDE-204ENST00000558031 ACACBO00763 2458 aa1.14□□□□□ -2.23
CRNDE-204ENST00000558031 SMR3BP02814 79 aaPredicted RBP1.13□□□□□ -2.23
CRNDE-204ENST00000558031 USP34Q70CQ2 3546 aa1.13□□□□□ -2.23
CRNDE-204ENST00000558031 TEX15Q9BXT5 2789 aa1.13□□□□□ -2.23
CRNDE-204ENST00000558031 ACANP16112 2415 aa1.13□□□□□ -2.23
CRNDE-204ENST00000558031 ANKRD11Q6UB99 2663 aaPredicted RBP1.12□□□□□ -2.23
CRNDE-204ENST00000558031 XIRP2A4UGR9 3374 aa1.12□□□□□ -2.23
CRNDE-204ENST00000558031 UNC79Q9P2D8 2635 aa1.11□□□□□ -2.23
CRNDE-204ENST00000558031 LAMA1P25391 3075 aa1.11□□□□□ -2.23
CRNDE-204ENST00000558031 CSMD2Q7Z408 3487 aa1.11□□□□□ -2.23
CRNDE-204ENST00000558031 FLNAP21333 2647 aaKnown RBP1.11□□□□□ -2.23
CRNDE-204ENST00000558031 ZFYVE26Q68DK2 2539 aa1.1□□□□□ -2.23
CRNDE-204ENST00000558031 DEFB4AO15263 64 aa1.1□□□□□ -2.23
CRNDE-204ENST00000558031 NOTCH1P46531 2555 aa1.09□□□□□ -2.23
CRNDE-204ENST00000558031 NBEAL1Q6ZS30 2694 aa1.09□□□□□ -2.23
CRNDE-204ENST00000558031 TLN2Q9Y4G6 2542 aa1.09□□□□□ -2.23
CRNDE-204ENST00000558031 CENPEQ02224 2701 aa1.09□□□□□ -2.23
CRNDE-204ENST00000558031 KRTAP19-5Q3LI72 72 aa1.09□□□□□ -2.23
CRNDE-204ENST00000558031 TENM3Q9P273 2699 aa1.09□□□□□ -2.24
CRNDE-204ENST00000558031 LPAP08519 4548 aa1.08□□□□□ -2.24
CRNDE-204ENST00000558031 EP400Q96L91 3159 aa1.08□□□□□ -2.24
CRNDE-204ENST00000558031 KRTAP19-3Q7Z4W3 81 aa1.08□□□□□ -2.24
CRNDE-204ENST00000558031 U3KQA8 63 aa1.08□□□□□ -2.24
CRNDE-204ENST00000558031 LOC400499M0QZD8 3231 aa1.08□□□□□ -2.24
CRNDE-204ENST00000558031 DYNC1H1Q14204 4646 aaKnown RBP1.08□□□□□ -2.24
CRNDE-204ENST00000558031 STAB2Q8WWQ8 2551 aa1.07□□□□□ -2.24
CRNDE-204ENST00000558031 VPS13CQ709C8 3753 aa1.06□□□□□ -2.24
CRNDE-204ENST00000558031 FLNBO75369 2602 aaKnown RBP1.06□□□□□ -2.24
CRNDE-204ENST00000558031 CENPFP49454 3210 aa1.06□□□□□ -2.24
CRNDE-204ENST00000558031 DOPEY1Q5JWR5 2465 aa1.06□□□□□ -2.24
CRNDE-204ENST00000558031 MYO18BQ8IUG5 2567 aa1.06□□□□□ -2.24
CRNDE-204ENST00000558031 LAMA2P24043 3122 aaKnown RBP1.06□□□□□ -2.24
CRNDE-204ENST00000558031 HRNRQ86YZ3 2850 aaPredicted RBP1.05□□□□□ -2.24
CRNDE-204ENST00000558031 ADGRG4Q8IZF6 3080 aa1.05□□□□□ -2.24
CRNDE-204ENST00000558031 TENM1Q9UKZ4 2725 aa1.05□□□□□ -2.24
CRNDE-204ENST00000558031 FAT1Q14517 4588 aa1.05□□□□□ -2.24
CRNDE-204ENST00000558031 ASPMQ8IZT6 3477 aa1.05□□□□□ -2.24
CRNDE-204ENST00000558031 MGAM2Q2M2H8 2515 aa1.04□□□□□ -2.24
CRNDE-204ENST00000558031 TLN1Q9Y490 2541 aaKnown RBP1.04□□□□□ -2.24
CRNDE-204ENST00000558031 FASNP49327 2511 aaKnown RBP1.03□□□□□ -2.25
CRNDE-204ENST00000558031 MYO15AQ9UKN7 3530 aa1.02□□□□□ -2.25
CRNDE-204ENST00000558031 CEP295Q9C0D2 2601 aa1.02□□□□□ -2.25
CRNDE-204ENST00000558031 MUC17Q685J3 4493 aa1.01□□□□□ -2.25
CRNDE-204ENST00000558031 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms