RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 C18orf32Q8TCD1 76 aa1.85□□□□□ -2.11
MTHFD1-216ENST00000557539 LINC00526Q96FQ7 95 aa1.85□□□□□ -2.11
MTHFD1-216ENST00000557539 CDKN2A-AS1Q9UH64 79 aa1.85□□□□□ -2.11
MTHFD1-216ENST00000557539 F8VRH5 84 aa1.84□□□□□ -2.11
MTHFD1-216ENST00000557539 C9orf116Q5BN46 136 aaPredicted RBP1.84□□□□□ -2.11
MTHFD1-216ENST00000557539 SFTA2Q6UW10 78 aa1.84□□□□□ -2.11
MTHFD1-216ENST00000557539 APOC3P02656 99 aa1.83□□□□□ -2.12
MTHFD1-216ENST00000557539 COX17Q14061 63 aa1.83□□□□□ -2.12
MTHFD1-216ENST00000557539 SPATA45Q537H7 98 aa1.83□□□□□ -2.12
MTHFD1-216ENST00000557539 OCIAD2Q56VL3 154 aa1.83□□□□□ -2.12
MTHFD1-216ENST00000557539 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
MTHFD1-216ENST00000557539 DLEU1O43261 78 aa1.82□□□□□ -2.12
MTHFD1-216ENST00000557539 COX7B2Q8TF08 81 aa1.82□□□□□ -2.12
MTHFD1-216ENST00000557539 SMCO4Q9NRQ5 59 aa1.82□□□□□ -2.12
MTHFD1-216ENST00000557539 PDE6GP18545 87 aa1.81□□□□□ -2.12
MTHFD1-216ENST00000557539 SPRR1AP35321 89 aa1.81□□□□□ -2.12
MTHFD1-216ENST00000557539 C22orf24Q9Y442 160 aa1.81□□□□□ -2.12
MTHFD1-216ENST00000557539 LINC00587B1AMM8 73 aa1.8□□□□□ -2.12
MTHFD1-216ENST00000557539 BCE1O60756 84 aa1.8□□□□□ -2.12
MTHFD1-216ENST00000557539 BAGE3Q86Y29 109 aa1.8□□□□□ -2.12
MTHFD1-216ENST00000557539 IFI27L1Q96BM0 104 aa1.8□□□□□ -2.12
MTHFD1-216ENST00000557539 SPINK8P0C7L1 97 aa1.79□□□□□ -2.12
MTHFD1-216ENST00000557539 PLNP26678 52 aa1.79□□□□□ -2.12
MTHFD1-216ENST00000557539 KRTAP12-4P60329 112 aa1.79□□□□□ -2.12
MTHFD1-216ENST00000557539 PMCHL1Q16048 86 aa1.79□□□□□ -2.12
MTHFD1-216ENST00000557539 PPDPFLQ8WWR9 84 aa1.79□□□□□ -2.12
MTHFD1-216ENST00000557539 LEPROTL1O95214 131 aa1.78□□□□□ -2.12
MTHFD1-216ENST00000557539 LINC01545Q5VT33 79 aa1.78□□□□□ -2.12
MTHFD1-216ENST00000557539 KRTAP8-1Q8IUC2 63 aa1.78□□□□□ -2.12
MTHFD1-216ENST00000557539 KCNQ1DNQ9H478 68 aa1.78□□□□□ -2.12
MTHFD1-216ENST00000557539 TOMM7Q9P0U1 55 aa1.78□□□□□ -2.12
MTHFD1-216ENST00000557539 TMEM170BQ5T4T1 132 aa1.77□□□□□ -2.13
MTHFD1-216ENST00000557539 DMAC1Q96GE9 116 aa1.77□□□□□ -2.13
MTHFD1-216ENST00000557539 MYMXA0A1B0GTQ4 84 aa1.76□□□□□ -2.13
MTHFD1-216ENST00000557539 SYS1-DBNDD2H3BUS1 97 aa1.76□□□□□ -2.13
MTHFD1-216ENST00000557539 MEIG1Q5JSS6 88 aa1.76□□□□□ -2.13
MTHFD1-216ENST00000557539 NDUFA12Q9UI09 145 aa1.76□□□□□ -2.13
MTHFD1-216ENST00000557539 NCR3O14931 201 aa1.75□□□□□ -2.13
MTHFD1-216ENST00000557539 SMIM13P0DJ93 91 aa1.75□□□□□ -2.13
MTHFD1-216ENST00000557539 SPRR1BP22528 89 aa1.75□□□□□ -2.13
MTHFD1-216ENST00000557539 RPS29P62273 56 aaKnown RBP1.75□□□□□ -2.13
MTHFD1-216ENST00000557539 SPRR4Q96PI1 79 aa1.75□□□□□ -2.13
MTHFD1-216ENST00000557539 TRBV10-3A0A0K0K1G6 114 aa1.74□□□□□ -2.13
MTHFD1-216ENST00000557539 C3orf79P0CE67 100 aa1.74□□□□□ -2.13
MTHFD1-216ENST00000557539 LINC00158P58513 81 aa1.74□□□□□ -2.13
MTHFD1-216ENST00000557539 PRLHP81277 87 aa1.74□□□□□ -2.13
MTHFD1-216ENST00000557539 SPAG11AQ6PDA7 123 aa1.74□□□□□ -2.13
MTHFD1-216ENST00000557539 Q6ZRX8 168 aa1.74□□□□□ -2.13
MTHFD1-216ENST00000557539 SPANXDQ9BXN6 97 aa1.74□□□□□ -2.13
MTHFD1-216ENST00000557539 CCDC179H3BU77 68 aa1.73□□□□□ -2.13
MTHFD1-216ENST00000557539 SNCGO76070 127 aa1.73□□□□□ -2.13
MTHFD1-216ENST00000557539 CCKP06307 115 aa1.73□□□□□ -2.13
MTHFD1-216ENST00000557539 S100A1P23297 94 aa1.73□□□□□ -2.13
MTHFD1-216ENST00000557539 LINC00308Q8TCZ7 52 aa1.73□□□□□ -2.13
MTHFD1-216ENST00000557539 COPS9Q8WXC6 57 aa1.73□□□□□ -2.13
MTHFD1-216ENST00000557539 PMCHL2Q9BQD1 86 aa1.73□□□□□ -2.13
MTHFD1-216ENST00000557539 IGLV5-48A0A075B6I7 105 aa1.72□□□□□ -2.13
MTHFD1-216ENST00000557539 LOC101927531A0A1B0GV80 90 aa1.72□□□□□ -2.13
MTHFD1-216ENST00000557539 SPINK1P00995 79 aa1.72□□□□□ -2.13
MTHFD1-216ENST00000557539 IFITM1P13164 125 aa1.72□□□□□ -2.13
MTHFD1-216ENST00000557539 ZNF815PA8K554 130 aa1.71□□□□□ -2.14
MTHFD1-216ENST00000557539 ELOF1P60002 83 aaKnown RBP1.71□□□□□ -2.14
MTHFD1-216ENST00000557539 RBM3P98179 157 aaKnown RBP1.71□□□□□ -2.14
MTHFD1-216ENST00000557539 SSBP3-AS1Q7Z2R9 100 aa1.71□□□□□ -2.14
MTHFD1-216ENST00000557539 ETDCA0A1B0GVM5 59 aa1.7□□□□□ -2.14
MTHFD1-216ENST00000557539 C20orf202A1L168 122 aa1.7□□□□□ -2.14
MTHFD1-216ENST00000557539 KRTDAPP60985 99 aa1.7□□□□□ -2.14
MTHFD1-216ENST00000557539 S100A7L2Q5SY68 101 aa1.7□□□□□ -2.14
MTHFD1-216ENST00000557539 Q6ZQY7 126 aa1.69□□□□□ -2.14
MTHFD1-216ENST00000557539 TRAV13-2A0A0B4J235 113 aa1.68□□□□□ -2.14
MTHFD1-216ENST00000557539 COX8AP10176 69 aa1.68□□□□□ -2.14
MTHFD1-216ENST00000557539 HIGD1BQ9P298 99 aa1.68□□□□□ -2.14
MTHFD1-216ENST00000557539 SERP1Q9Y6X1 66 aa1.68□□□□□ -2.14
MTHFD1-216ENST00000557539 TEX49A0A1B0GTD5 131 aa1.67□□□□□ -2.14
MTHFD1-216ENST00000557539 COX7BP24311 80 aa1.67□□□□□ -2.14
MTHFD1-216ENST00000557539 MUSTN1Q8IVN3 82 aa1.67□□□□□ -2.14
MTHFD1-216ENST00000557539 SMIM11BQ8TCY0 68 aa1.67□□□□□ -2.14
MTHFD1-216ENST00000557539 NPC2P61916 151 aa1.66□□□□□ -2.14
MTHFD1-216ENST00000557539 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
MTHFD1-216ENST00000557539 LINC00575Q6W349 94 aa1.66□□□□□ -2.14
MTHFD1-216ENST00000557539 LINC00208Q96KT6 92 aa1.66□□□□□ -2.14
MTHFD1-216ENST00000557539 PRO1933Q9H354 126 aa1.65□□□□□ -2.15
MTHFD1-216ENST00000557539 PYY3Q5JQD4 70 aa1.64□□□□□ -2.15
MTHFD1-216ENST00000557539 BVES-AS1Q5T3Y7 98 aa1.64□□□□□ -2.15
MTHFD1-216ENST00000557539 Q6JHZ5 121 aa1.64□□□□□ -2.15
MTHFD1-216ENST00000557539 SPTSSBQ8NFR3 76 aa1.64□□□□□ -2.15
MTHFD1-216ENST00000557539 TRBV7-7A0A0K0K1E9 115 aa1.63□□□□□ -2.15
MTHFD1-216ENST00000557539 hADV29S1A0JD25 119 aa1.63□□□□□ -2.15
MTHFD1-216ENST00000557539 H0YGX0 51 aa1.63□□□□□ -2.15
MTHFD1-216ENST00000557539 KRTAP20-2Q3LI61 65 aa1.63□□□□□ -2.15
MTHFD1-216ENST00000557539 C9orf153Q5TBE3 101 aa1.63□□□□□ -2.15
MTHFD1-216ENST00000557539 RPL37P61927 97 aaKnown RBP1.62□□□□□ -2.15
MTHFD1-216ENST00000557539 HSD52Q0P140 79 aa1.62□□□□□ -2.15
MTHFD1-216ENST00000557539 C14orf144Q96I85 54 aa1.62□□□□□ -2.15
MTHFD1-216ENST00000557539 VAMP8Q9BV40 100 aa1.62□□□□□ -2.15
MTHFD1-216ENST00000557539 PRO1854Q9UHT4 67 aa1.62□□□□□ -2.15
MTHFD1-216ENST00000557539 Q96NJ1 140 aa1.61□□□□□ -2.15
MTHFD1-216ENST00000557539 SYNE1Q8NF91 8797 aaKnown RBP1.61□□□□□ -2.15
MTHFD1-216ENST00000557539 TRBV7-4A0A0J9YYF1 115 aa1.6□□□□□ -2.15
MTHFD1-216ENST00000557539 F8WEM9 126 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms