RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 Q8NDZ9 215 aa2.89□□□□□ -1.95
ATXN3-247ENST00000557311 M0QY20 66 aa2.88□□□□□ -1.95
ATXN3-247ENST00000557311 IGLV7-43P04211 117 aa2.88□□□□□ -1.95
ATXN3-247ENST00000557311 CAMK2N2Q96S95 79 aa2.88□□□□□ -1.95
ATXN3-247ENST00000557311 IGKV2-28A0A075B6P5 120 aa2.87□□□□□ -1.95
ATXN3-247ENST00000557311 IGKV3OR2-268A0A0C4DH90 116 aa2.87□□□□□ -1.95
ATXN3-247ENST00000557311 A8MWP4 228 aa2.87□□□□□ -1.95
ATXN3-247ENST00000557311 IGKV2D-28P01615 120 aa2.87□□□□□ -1.95
ATXN3-247ENST00000557311 COX7BP24311 80 aa2.87□□□□□ -1.95
ATXN3-247ENST00000557311 LINC00158P58513 81 aa2.87□□□□□ -1.95
ATXN3-247ENST00000557311 KCNQ1DNQ9H478 68 aa2.87□□□□□ -1.95
ATXN3-247ENST00000557311 C8orf17Q9NRJ1 99 aa2.87□□□□□ -1.95
ATXN3-247ENST00000557311 CDKN2A-AS1Q9UH64 79 aa2.87□□□□□ -1.95
ATXN3-247ENST00000557311 KRTAP1-4P0C5Y4 121 aa2.86□□□□□ -1.95
ATXN3-247ENST00000557311 A0A087WSZ3 146 aa2.84□□□□□ -1.95
ATXN3-247ENST00000557311 UQCR11O14957 56 aa2.84□□□□□ -1.95
ATXN3-247ENST00000557311 DSCR10P59022 87 aa2.84□□□□□ -1.95
ATXN3-247ENST00000557311 KRTAP25-1Q3LHN0 102 aa2.84□□□□□ -1.95
ATXN3-247ENST00000557311 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.84□□□□□ -1.95
ATXN3-247ENST00000557311 LINC00575Q6W349 94 aa2.84□□□□□ -1.95
ATXN3-247ENST00000557311 Q8N9L7 120 aa2.84□□□□□ -1.95
ATXN3-247ENST00000557311 MUC17Q685J3 4493 aa2.83□□□□□ -1.96
ATXN3-247ENST00000557311 LINC00959A0A1B0GUT2 108 aa2.83□□□□□ -1.96
ATXN3-247ENST00000557311 LINC00483Q53H64 154 aa2.83□□□□□ -1.96
ATXN3-247ENST00000557311 SPATA8Q6RVD6 105 aa2.83□□□□□ -1.96
ATXN3-247ENST00000557311 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
ATXN3-247ENST00000557311 KRTAP11-1Q8IUC1 163 aa2.82□□□□□ -1.96
ATXN3-247ENST00000557311 ST20-AS1Q8NBB2 130 aa2.82□□□□□ -1.96
ATXN3-247ENST00000557311 DMAC1Q96GE9 116 aa2.82□□□□□ -1.96
ATXN3-247ENST00000557311 C20orf166-AS1Q96NR2 134 aa2.82□□□□□ -1.96
ATXN3-247ENST00000557311 FSIP2Q5CZC0 6907 aa2.81□□□□□ -1.96
ATXN3-247ENST00000557311 RPL37AP8A6NKH3 93 aa2.81□□□□□ -1.96
ATXN3-247ENST00000557311 ZNF861PO60384 105 aa2.81□□□□□ -1.96
ATXN3-247ENST00000557311 P0C880 135 aa2.81□□□□□ -1.96
ATXN3-247ENST00000557311 Q6ZQY7 126 aa2.81□□□□□ -1.96
ATXN3-247ENST00000557311 FAM168BA1KXE4 195 aa2.8□□□□□ -1.96
ATXN3-247ENST00000557311 TYMSOSQ8TAI1 123 aa2.8□□□□□ -1.96
ATXN3-247ENST00000557311 KRTAP4-16G5E9R7 235 aaPredicted RBP2.79□□□□□ -1.96
ATXN3-247ENST00000557311 TLX1NBP0CAT3 122 aa2.79□□□□□ -1.96
ATXN3-247ENST00000557311 Q8NBF4 154 aa2.79□□□□□ -1.96
ATXN3-247ENST00000557311 SPRR4Q96PI1 79 aa2.79□□□□□ -1.96
ATXN3-247ENST00000557311 TOMM7Q9P0U1 55 aa2.79□□□□□ -1.96
ATXN3-247ENST00000557311 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
ATXN3-247ENST00000557311 LCE3CQ5T5A8 94 aa2.78□□□□□ -1.96
ATXN3-247ENST00000557311 CAMK2N1Q7Z7J9 78 aa2.78□□□□□ -1.96
ATXN3-247ENST00000557311 DHRS4-AS1Q9P1J3 65 aa2.78□□□□□ -1.96
ATXN3-247ENST00000557311 IGLV8-61A0A075B6I0 122 aa2.77□□□□□ -1.97
ATXN3-247ENST00000557311 A0A1B0GU69 56 aa2.77□□□□□ -1.97
ATXN3-247ENST00000557311 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
ATXN3-247ENST00000557311 UNQ6190/PRO20217Q6UXQ8 127 aa2.76□□□□□ -1.97
ATXN3-247ENST00000557311 Q8IZM0 81 aa2.76□□□□□ -1.97
ATXN3-247ENST00000557311 LINC00304Q8N9R0 145 aa2.76□□□□□ -1.97
ATXN3-247ENST00000557311 C6orf48Q9UBA6 75 aa2.76□□□□□ -1.97
ATXN3-247ENST00000557311 COX17Q14061 63 aa2.75□□□□□ -1.97
ATXN3-247ENST00000557311 ANAPC11Q9NYG5 84 aa2.75□□□□□ -1.97
ATXN3-247ENST00000557311 A8MUU9 505 aa2.74□□□□□ -1.97
ATXN3-247ENST00000557311 KRTAP13-2Q52LG2 175 aa2.74□□□□□ -1.97
ATXN3-247ENST00000557311 KRTAP4-1Q9BYQ7 146 aa2.74□□□□□ -1.97
ATXN3-247ENST00000557311 A0A1B0GVX0 72 aa2.73□□□□□ -1.97
ATXN3-247ENST00000557311 K7EQZ3 153 aa2.73□□□□□ -1.97
ATXN3-247ENST00000557311 Q8N377 158 aa2.73□□□□□ -1.97
ATXN3-247ENST00000557311 HRES1P13985 223 aa2.72□□□□□ -1.97
ATXN3-247ENST00000557311 KRTAP13-3Q3SY46 172 aa2.72□□□□□ -1.97
ATXN3-247ENST00000557311 WFDC13Q8IUB5 93 aa2.72□□□□□ -1.97
ATXN3-247ENST00000557311 MT1HP80294 61 aa2.71□□□□□ -1.98
ATXN3-247ENST00000557311 Q5W150 140 aa2.71□□□□□ -1.98
ATXN3-247ENST00000557311 IGLV6-57P01721 117 aa2.7□□□□□ -1.98
ATXN3-247ENST00000557311 ACYP2P14621 99 aa2.7□□□□□ -1.98
ATXN3-247ENST00000557311 KRTAP13-1Q8IUC0 172 aa2.7□□□□□ -1.98
ATXN3-247ENST00000557311 PCOTHQ58A44 107 aa2.69□□□□□ -1.98
ATXN3-247ENST00000557311 TP53AIP1Q9HCN2 124 aa2.69□□□□□ -1.98
ATXN3-247ENST00000557311 IGLV5-48A0A075B6I7 105 aa2.68□□□□□ -1.98
ATXN3-247ENST00000557311 KRTAP19-2Q3LHN2 52 aa2.68□□□□□ -1.98
ATXN3-247ENST00000557311 LINC00472Q9H8W2 130 aa2.68□□□□□ -1.98
ATXN3-247ENST00000557311 SPINK1P00995 79 aa2.67□□□□□ -1.98
ATXN3-247ENST00000557311 M0R2T5 61 aa2.66□□□□□ -1.98
ATXN3-247ENST00000557311 DEFB116Q30KQ4 102 aa2.66□□□□□ -1.98
ATXN3-247ENST00000557311 PRLHP81277 87 aa2.65□□□□□ -1.99
ATXN3-247ENST00000557311 SSBP3-AS1Q7Z2R9 100 aa2.64□□□□□ -1.99
ATXN3-247ENST00000557311 KRTAP4-3Q9BYR4 195 aa2.64□□□□□ -1.99
ATXN3-247ENST00000557311 RPS29P62273 56 aaKnown RBP2.63□□□□□ -1.99
ATXN3-247ENST00000557311 Q96NJ1 140 aa2.62□□□□□ -1.99
ATXN3-247ENST00000557311 DEFB105AQ8NG35 78 aa2.61□□□□□ -1.99
ATXN3-247ENST00000557311 COX6B2Q6YFQ2 88 aa2.6□□□□□ -1.99
ATXN3-247ENST00000557311 A0A1B0GU33 70 aa2.58□□□□□ -2
ATXN3-247ENST00000557311 SSPOA2VEC9 5147 aa2.58□□□□□ -2
ATXN3-247ENST00000557311 MMP24-AS1A0A0U1RRL7 71 aa2.57□□□□□ -2
ATXN3-247ENST00000557311 USH2AO75445 5202 aa2.55□□□□□ -2
ATXN3-247ENST00000557311 C9orf92A6NGG3 77 aa2.55□□□□□ -2
ATXN3-247ENST00000557311 FCGBPQ9Y6R7 5405 aaPredicted RBP2.54□□□□□ -2
ATXN3-247ENST00000557311 SPRR1AP35321 89 aa2.54□□□□□ -2
ATXN3-247ENST00000557311 KRTAP12-2P59991 146 aa2.54□□□□□ -2
ATXN3-247ENST00000557311 A0A0G2JQZ4 141 aa2.53□□□□□ -2
ATXN3-247ENST00000557311 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
ATXN3-247ENST00000557311 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
ATXN3-247ENST00000557311 FLGP20930 4061 aaPredicted RBP2.53□□□□□ -2
ATXN3-247ENST00000557311 RPL37P61927 97 aaKnown RBP2.52□□□□□ -2.01
ATXN3-247ENST00000557311 Q6ZRX8 168 aa2.52□□□□□ -2.01
ATXN3-247ENST00000557311 MRPL34Q9BQ48 92 aaKnown RBP2.52□□□□□ -2.01
ATXN3-247ENST00000557311 CRIPTQ9P021 101 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms