RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 KRTAP4-8A0A0G2JLE6 195 aa5.24□□□□□ -1.57
PSEN1-221ENST00000557293 KRTAP4-8Q9BYQ9 185 aa5.24□□□□□ -1.57
PSEN1-221ENST00000557293 SPCS1Q9Y6A9 102 aa5.24□□□□□ -1.57
PSEN1-221ENST00000557293 NREPQ16612 68 aa5.23□□□□□ -1.57
PSEN1-221ENST00000557293 KRTAP12-2P59991 146 aa5.22□□□□□ -1.57
PSEN1-221ENST00000557293 C1orf64Q8NEQ6 169 aa5.22□□□□□ -1.57
PSEN1-221ENST00000557293 JMJD7-PLA2G4BH0Y9G9 81 aa5.19□□□□□ -1.58
PSEN1-221ENST00000557293 SCGB1C2P0DMR2 95 aa5.19□□□□□ -1.58
PSEN1-221ENST00000557293 GTF2H5Q6ZYL4 71 aa5.19□□□□□ -1.58
PSEN1-221ENST00000557293 HCG22E2RYF7 251 aa5.18□□□□□ -1.58
PSEN1-221ENST00000557293 PDE6GP18545 87 aa5.18□□□□□ -1.58
PSEN1-221ENST00000557293 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
PSEN1-221ENST00000557293 C14orf132Q9NPU4 83 aa5.17□□□□□ -1.58
PSEN1-221ENST00000557293 ATXN8Q156A1 80 aa5.16□□□□□ -1.58
PSEN1-221ENST00000557293 F8W1H4 67 aa5.15□□□□□ -1.59
PSEN1-221ENST00000557293 A0A087WVE0 104 aa5.14□□□□□ -1.59
PSEN1-221ENST00000557293 H3BT86 120 aa5.13□□□□□ -1.59
PSEN1-221ENST00000557293 CASC2Q6XLA1 102 aa5.13□□□□□ -1.59
PSEN1-221ENST00000557293 CXCL6P80162 114 aa5.12□□□□□ -1.59
PSEN1-221ENST00000557293 ETDBQ3ZM63 59 aa5.11□□□□□ -1.59
PSEN1-221ENST00000557293 Q8N9L7 120 aa5.11□□□□□ -1.59
PSEN1-221ENST00000557293 H3BS24 57 aa5.08□□□□□ -1.6
PSEN1-221ENST00000557293 BPY2O14599 106 aa5.08□□□□□ -1.6
PSEN1-221ENST00000557293 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
PSEN1-221ENST00000557293 H0YAA0 97 aa5.05□□□□□ -1.6
PSEN1-221ENST00000557293 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
PSEN1-221ENST00000557293 PLAC4Q8WY50 150 aa5.04□□□□□ -1.6
PSEN1-221ENST00000557293 DSTQ03001 7570 aaKnown RBP5.04□□□□□ -1.6
PSEN1-221ENST00000557293 A8MUN3 132 aa5.03□□□□□ -1.6
PSEN1-221ENST00000557293 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
PSEN1-221ENST00000557293 FAM240AA0A1B0GVK7 77 aa4.97□□□□□ -1.61
PSEN1-221ENST00000557293 K7ERU9 68 aa4.97□□□□□ -1.61
PSEN1-221ENST00000557293 ADM2Q7Z4H4 148 aa4.96□□□□□ -1.62
PSEN1-221ENST00000557293 CYP4F30PQ9H0H9 118 aa4.94□□□□□ -1.62
PSEN1-221ENST00000557293 J3QR89 54 aa4.91□□□□□ -1.62
PSEN1-221ENST00000557293 NDUFC1O43677 76 aa4.9□□□□□ -1.63
PSEN1-221ENST00000557293 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
PSEN1-221ENST00000557293 ACYP1P07311 99 aa4.89□□□□□ -1.63
PSEN1-221ENST00000557293 LCE1DQ5T752 114 aa4.89□□□□□ -1.63
PSEN1-221ENST00000557293 KRTAP4-6Q9BYQ5 205 aa4.89□□□□□ -1.63
PSEN1-221ENST00000557293 TP53AIP1Q9HCN2 124 aa4.88□□□□□ -1.63
PSEN1-221ENST00000557293 MT-ATP8P03928 68 aa4.86□□□□□ -1.63
PSEN1-221ENST00000557293 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
PSEN1-221ENST00000557293 P0C880 135 aa4.84□□□□□ -1.63
PSEN1-221ENST00000557293 LINC00643Q86TS7 51 aa4.83□□□□□ -1.64
PSEN1-221ENST00000557293 R4GN34 69 aa4.83□□□□□ -1.64
PSEN1-221ENST00000557293 KRTAP5-10Q6L8G5 202 aa4.81□□□□□ -1.64
PSEN1-221ENST00000557293 HMCN1Q96RW7 5635 aa4.81□□□□□ -1.64
PSEN1-221ENST00000557293 M0QZ58 72 aa4.79□□□□□ -1.64
PSEN1-221ENST00000557293 AHNAK2Q8IVF2 5795 aa4.78□□□□□ -1.64
PSEN1-221ENST00000557293 HIST1H4AP62805 103 aaKnown RBP4.77□□□□□ -1.65
PSEN1-221ENST00000557293 ATP5EP2Q5VTU8 51 aa4.77□□□□□ -1.65
PSEN1-221ENST00000557293 UBL5Q9BZL1 73 aa4.76□□□□□ -1.65
PSEN1-221ENST00000557293 LOC101927531A0A1B0GV80 90 aa4.75□□□□□ -1.65
PSEN1-221ENST00000557293 MT4P47944 62 aa4.75□□□□□ -1.65
PSEN1-221ENST00000557293 LINC01554Q52M75 96 aa4.75□□□□□ -1.65
PSEN1-221ENST00000557293 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
PSEN1-221ENST00000557293 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
PSEN1-221ENST00000557293 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
PSEN1-221ENST00000557293 TRAV22A0A0B4J277 110 aa4.73□□□□□ -1.65
PSEN1-221ENST00000557293 SCGB1A1P11684 91 aa4.73□□□□□ -1.65
PSEN1-221ENST00000557293 MT1EP04732 61 aa4.7□□□□□ -1.66
PSEN1-221ENST00000557293 KRTAP5-7Q6L8G8 165 aa4.68□□□□□ -1.66
PSEN1-221ENST00000557293 C20orf197Q8N268 126 aa4.67□□□□□ -1.66
PSEN1-221ENST00000557293 CYSTM1Q9H1C7 97 aa4.64□□□□□ -1.67
PSEN1-221ENST00000557293 OCR1Q9BZK8 76 aa4.62□□□□□ -1.67
PSEN1-221ENST00000557293 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
PSEN1-221ENST00000557293 H0Y9P7 68 aa4.59□□□□□ -1.67
PSEN1-221ENST00000557293 ATOX1O00244 68 aa4.59□□□□□ -1.67
PSEN1-221ENST00000557293 MT1GP13640 62 aa4.58□□□□□ -1.68
PSEN1-221ENST00000557293 PCP4P48539 62 aa4.58□□□□□ -1.68
PSEN1-221ENST00000557293 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
PSEN1-221ENST00000557293 UQCRQO14949 82 aa4.57□□□□□ -1.68
PSEN1-221ENST00000557293 TRAV7A0A075B6U4 112 aa4.55□□□□□ -1.68
PSEN1-221ENST00000557293 SERP2Q8N6R1 65 aa4.55□□□□□ -1.68
PSEN1-221ENST00000557293 CCDC179H3BU77 68 aa4.54□□□□□ -1.68
PSEN1-221ENST00000557293 COX7CP15954 63 aa4.54□□□□□ -1.68
PSEN1-221ENST00000557293 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
PSEN1-221ENST00000557293 ANAPC13Q9BS18 74 aa4.54□□□□□ -1.68
PSEN1-221ENST00000557293 MT1MQ8N339 61 aa4.51□□□□□ -1.69
PSEN1-221ENST00000557293 SMIM20Q8N5G0 67 aa4.51□□□□□ -1.69
PSEN1-221ENST00000557293 LINC00208Q96KT6 92 aa4.49□□□□□ -1.69
PSEN1-221ENST00000557293 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
PSEN1-221ENST00000557293 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
PSEN1-221ENST00000557293 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
PSEN1-221ENST00000557293 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
PSEN1-221ENST00000557293 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
PSEN1-221ENST00000557293 H7BZZ5 65 aa4.43□□□□□ -1.7
PSEN1-221ENST00000557293 DMAC1Q96GE9 116 aa4.43□□□□□ -1.7
PSEN1-221ENST00000557293 MT1LQ93083 61 aa4.42□□□□□ -1.7
PSEN1-221ENST00000557293 SNURFQ9Y675 71 aa4.41□□□□□ -1.7
PSEN1-221ENST00000557293 H3BPC8 53 aa4.4□□□□□ -1.71
PSEN1-221ENST00000557293 A0A0D9SG42 100 aa4.36□□□□□ -1.71
PSEN1-221ENST00000557293 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
PSEN1-221ENST00000557293 KRTAP13-4Q3LI77 160 aa4.35□□□□□ -1.71
PSEN1-221ENST00000557293 CAMK2N1Q7Z7J9 78 aa4.35□□□□□ -1.71
PSEN1-221ENST00000557293 MP68P56378 58 aa4.34□□□□□ -1.71
PSEN1-221ENST00000557293 TMEM258P61165 79 aa4.32□□□□□ -1.72
PSEN1-221ENST00000557293 SPANXA2-OT1Q8N9U9 137 aa4.3□□□□□ -1.72
PSEN1-221ENST00000557293 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms