RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 TMEM258P61165 79 aa1.98□□□□□ -2.09
SCFD1-223ENST00000557076 PMCHL2Q9BQD1 86 aa1.98□□□□□ -2.09
SCFD1-223ENST00000557076 LINC00472Q9H8W2 130 aa1.98□□□□□ -2.09
SCFD1-223ENST00000557076 H3BMG7 143 aa1.97□□□□□ -2.09
SCFD1-223ENST00000557076 TAX1BP3O14907 124 aa1.97□□□□□ -2.09
SCFD1-223ENST00000557076 APOC3P02656 99 aa1.97□□□□□ -2.09
SCFD1-223ENST00000557076 FABP2P12104 132 aa1.97□□□□□ -2.09
SCFD1-223ENST00000557076 MUSTN1Q8IVN3 82 aa1.97□□□□□ -2.09
SCFD1-223ENST00000557076 BRK1Q8WUW1 75 aa1.97□□□□□ -2.09
SCFD1-223ENST00000557076 RAB37Q96AX2 223 aa1.97□□□□□ -2.09
SCFD1-223ENST00000557076 VAMP8Q9BV40 100 aa1.97□□□□□ -2.09
SCFD1-223ENST00000557076 PRO2289Q9P1D8 64 aa1.97□□□□□ -2.09
SCFD1-223ENST00000557076 TRBV7-4A0A0J9YYF1 115 aa1.96□□□□□ -2.1
SCFD1-223ENST00000557076 KLKP1Q107X0 134 aa1.96□□□□□ -2.1
SCFD1-223ENST00000557076 DEFB116Q30KQ4 102 aa1.96□□□□□ -2.1
SCFD1-223ENST00000557076 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
SCFD1-223ENST00000557076 LCA10Q71F78 164 aa1.96□□□□□ -2.1
SCFD1-223ENST00000557076 IGKV3D-7A0A0C4DH55 119 aa1.95□□□□□ -2.1
SCFD1-223ENST00000557076 A0A1B0GVX0 72 aa1.95□□□□□ -2.1
SCFD1-223ENST00000557076 A0A1B0GW54 56 aa1.95□□□□□ -2.1
SCFD1-223ENST00000557076 UQCRQO14949 82 aa1.95□□□□□ -2.1
SCFD1-223ENST00000557076 LINC01545Q5VT33 79 aa1.95□□□□□ -2.1
SCFD1-223ENST00000557076 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
SCFD1-223ENST00000557076 ATOH7Q8N100 152 aa1.95□□□□□ -2.1
SCFD1-223ENST00000557076 Q8N9L7 120 aa1.95□□□□□ -2.1
SCFD1-223ENST00000557076 DSCR8Q96T75 97 aa1.95□□□□□ -2.1
SCFD1-223ENST00000557076 FABP4P15090 132 aa1.94□□□□□ -2.1
SCFD1-223ENST00000557076 HIST1H2BOP23527 126 aa1.94□□□□□ -2.1
SCFD1-223ENST00000557076 HIST1H2BBP33778 126 aa1.94□□□□□ -2.1
SCFD1-223ENST00000557076 HIST1H2BDP58876 126 aa1.94□□□□□ -2.1
SCFD1-223ENST00000557076 HIST1H2BCP62807 126 aa1.94□□□□□ -2.1
SCFD1-223ENST00000557076 MT1XP80297 61 aa1.94□□□□□ -2.1
SCFD1-223ENST00000557076 HIST2H2BEQ16778 126 aa1.94□□□□□ -2.1
SCFD1-223ENST00000557076 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-223ENST00000557076 BVES-AS1Q5T3Y7 98 aa1.94□□□□□ -2.1
SCFD1-223ENST00000557076 CSAG1Q6PB30 78 aa1.94□□□□□ -2.1
SCFD1-223ENST00000557076 HIST1H2BHQ93079 126 aa1.94□□□□□ -2.1
SCFD1-223ENST00000557076 HIST1H2BNQ99877 126 aa1.94□□□□□ -2.1
SCFD1-223ENST00000557076 HIST1H2BMQ99879 126 aa1.94□□□□□ -2.1
SCFD1-223ENST00000557076 TTTY13Q9BZ97 58 aa1.94□□□□□ -2.1
SCFD1-223ENST00000557076 CRIPTQ9P021 101 aa1.94□□□□□ -2.1
SCFD1-223ENST00000557076 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
SCFD1-223ENST00000557076 SNCGO76070 127 aa1.93□□□□□ -2.1
SCFD1-223ENST00000557076 TRACP01848 142 aa1.93□□□□□ -2.1
SCFD1-223ENST00000557076 HIST3H2BBQ8N257 126 aa1.93□□□□□ -2.1
SCFD1-223ENST00000557076 UQCR10Q9UDW1 63 aa1.93□□□□□ -2.1
SCFD1-223ENST00000557076 F8W1H4 67 aa1.92□□□□□ -2.1
SCFD1-223ENST00000557076 H3BT86 120 aa1.92□□□□□ -2.1
SCFD1-223ENST00000557076 TMEM256-PLSCR3K7ERE1 68 aa1.92□□□□□ -2.1
SCFD1-223ENST00000557076 SERP1Q9Y6X1 66 aa1.92□□□□□ -2.1
SCFD1-223ENST00000557076 K7EP34 96 aa1.91□□□□□ -2.1
SCFD1-223ENST00000557076 HIST1H2BKO60814 126 aa1.91□□□□□ -2.1
SCFD1-223ENST00000557076 HIST1H2BJP06899 126 aa1.91□□□□□ -2.1
SCFD1-223ENST00000557076 LINC01554Q52M75 96 aa1.91□□□□□ -2.1
SCFD1-223ENST00000557076 SYS1-DBNDD2H3BUS1 97 aa1.9□□□□□ -2.11
SCFD1-223ENST00000557076 MT-ATP8P03928 68 aa1.9□□□□□ -2.11
SCFD1-223ENST00000557076 C2orf91Q6ZV80 131 aa1.9□□□□□ -2.11
SCFD1-223ENST00000557076 HIST1H2BLQ99880 126 aa1.9□□□□□ -2.11
SCFD1-223ENST00000557076 H0YGX0 51 aa1.89□□□□□ -2.11
SCFD1-223ENST00000557076 K7ERJ3 54 aa1.88□□□□□ -2.11
SCFD1-223ENST00000557076 NDUFB1O75438 58 aa1.88□□□□□ -2.11
SCFD1-223ENST00000557076 CCKP06307 115 aa1.88□□□□□ -2.11
SCFD1-223ENST00000557076 COX7CP15954 63 aa1.88□□□□□ -2.11
SCFD1-223ENST00000557076 HIST1H4AP62805 103 aaKnown RBP1.88□□□□□ -2.11
SCFD1-223ENST00000557076 C7orf65Q6ZTY9 151 aa1.88□□□□□ -2.11
SCFD1-223ENST00000557076 C8orf17Q9NRJ1 99 aa1.87□□□□□ -2.11
SCFD1-223ENST00000557076 S4R3F8 94 aa1.87□□□□□ -2.11
SCFD1-223ENST00000557076 H3BQ85 93 aa1.86□□□□□ -2.11
SCFD1-223ENST00000557076 MT4P47944 62 aa1.86□□□□□ -2.11
SCFD1-223ENST00000557076 PLAC4Q8WY50 150 aa1.86□□□□□ -2.11
SCFD1-223ENST00000557076 SPRR5A0A1B0GTR4 108 aa1.85□□□□□ -2.11
SCFD1-223ENST00000557076 K7ERS5 55 aa1.85□□□□□ -2.11
SCFD1-223ENST00000557076 ATP5EP56381 51 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-223ENST00000557076 Q5W150 140 aa1.85□□□□□ -2.11
SCFD1-223ENST00000557076 BPY2O14599 106 aa1.84□□□□□ -2.11
SCFD1-223ENST00000557076 RBM3P98179 157 aaKnown RBP1.84□□□□□ -2.11
SCFD1-223ENST00000557076 SPCS1Q9Y6A9 102 aa1.84□□□□□ -2.11
SCFD1-223ENST00000557076 A0A1W2PPM0 123 aa1.83□□□□□ -2.12
SCFD1-223ENST00000557076 ATOX1O00244 68 aa1.83□□□□□ -2.12
SCFD1-223ENST00000557076 SPATA45Q537H7 98 aa1.83□□□□□ -2.12
SCFD1-223ENST00000557076 LUZP6Q538Z0 58 aa1.83□□□□□ -2.12
SCFD1-223ENST00000557076 MRPL34Q9BQ48 92 aaKnown RBP1.83□□□□□ -2.12
SCFD1-223ENST00000557076 K7EQZ3 153 aa1.82□□□□□ -2.12
SCFD1-223ENST00000557076 KRTDAPP60985 99 aa1.82□□□□□ -2.12
SCFD1-223ENST00000557076 Q6ZQT0 140 aa1.82□□□□□ -2.12
SCFD1-223ENST00000557076 TMEM254Q8TBM7 123 aa1.82□□□□□ -2.12
SCFD1-223ENST00000557076 A6NED7 52 aa1.81□□□□□ -2.12
SCFD1-223ENST00000557076 ETDBQ3ZM63 59 aa1.81□□□□□ -2.12
SCFD1-223ENST00000557076 C1orf64Q8NEQ6 169 aa1.81□□□□□ -2.12
SCFD1-223ENST00000557076 ORMDL1Q9P0S3 153 aa1.81□□□□□ -2.12
SCFD1-223ENST00000557076 hDV103S1A0JD37 113 aa1.8□□□□□ -2.12
SCFD1-223ENST00000557076 H0YAA0 97 aa1.8□□□□□ -2.12
SCFD1-223ENST00000557076 PDE6GP18545 87 aa1.8□□□□□ -2.12
SCFD1-223ENST00000557076 Q1T7F1 81 aa1.79□□□□□ -2.12
SCFD1-223ENST00000557076 ADM2Q7Z4H4 148 aa1.79□□□□□ -2.12
SCFD1-223ENST00000557076 SERP2Q8N6R1 65 aa1.79□□□□□ -2.12
SCFD1-223ENST00000557076 MMP24-AS1A0A0U1RRL7 71 aa1.78□□□□□ -2.12
SCFD1-223ENST00000557076 NDUFC1O43677 76 aa1.78□□□□□ -2.12
SCFD1-223ENST00000557076 DNAL4O96015 105 aa1.78□□□□□ -2.12
SCFD1-223ENST00000557076 KRTAP19-3Q7Z4W3 81 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms