RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 FRAS1Q86XX4 4008 aa2.74□□□□□ -1.97
ATXN3-246ENST00000557030 IGHV6-1A0A0B4J1U7 121 aa2.73□□□□□ -1.97
ATXN3-246ENST00000557030 C7orf65Q6ZTY9 151 aa2.73□□□□□ -1.97
ATXN3-246ENST00000557030 DNAH2Q9P225 4427 aa2.72□□□□□ -1.97
ATXN3-246ENST00000557030 C8orf87E5RJ46 101 aa2.72□□□□□ -1.97
ATXN3-246ENST00000557030 PANO1I0J062 215 aa2.72□□□□□ -1.97
ATXN3-246ENST00000557030 ZNF861PO60384 105 aa2.72□□□□□ -1.97
ATXN3-246ENST00000557030 HRES1P13985 223 aa2.72□□□□□ -1.97
ATXN3-246ENST00000557030 SPAG11AQ6PDA7 123 aa2.72□□□□□ -1.97
ATXN3-246ENST00000557030 Q6ZRN7 208 aaPredicted RBP2.72□□□□□ -1.97
ATXN3-246ENST00000557030 DNAH6Q9C0G6 4158 aa2.71□□□□□ -1.97
ATXN3-246ENST00000557030 NBDYA0A0U1RRE5 68 aa2.71□□□□□ -1.98
ATXN3-246ENST00000557030 ACYP2P14621 99 aa2.71□□□□□ -1.98
ATXN3-246ENST00000557030 SPACA4Q8TDM5 124 aa2.71□□□□□ -1.98
ATXN3-246ENST00000557030 STAB2Q8WWQ8 2551 aa2.71□□□□□ -1.98
ATXN3-246ENST00000557030 RBM12B-AS1Q9P1G2 102 aa2.7□□□□□ -1.98
ATXN3-246ENST00000557030 HECTD4Q9Y4D8 3996 aa2.7□□□□□ -1.98
ATXN3-246ENST00000557030 ABCA13Q86UQ4 5058 aa2.69□□□□□ -1.98
ATXN3-246ENST00000557030 NUPR2A6NF83 97 aa2.69□□□□□ -1.98
ATXN3-246ENST00000557030 SPINK7P58062 85 aa2.68□□□□□ -1.98
ATXN3-246ENST00000557030 DMAC1Q96GE9 116 aa2.68□□□□□ -1.98
ATXN3-246ENST00000557030 DNAH8Q96JB1 4490 aa2.68□□□□□ -1.98
ATXN3-246ENST00000557030 ALMS1Q8TCU4 4167 aa2.68□□□□□ -1.98
ATXN3-246ENST00000557030 DNAH11Q96DT5 4516 aa2.67□□□□□ -1.98
ATXN3-246ENST00000557030 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
ATXN3-246ENST00000557030 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
ATXN3-246ENST00000557030 SSBP3-AS1Q7Z2R9 100 aa2.67□□□□□ -1.98
ATXN3-246ENST00000557030 PSORS1C2Q9UIG4 136 aa2.67□□□□□ -1.98
ATXN3-246ENST00000557030 MUC2Q02817 5179 aa2.67□□□□□ -1.98
ATXN3-246ENST00000557030 HERC1Q15751 4861 aa2.66□□□□□ -1.98
ATXN3-246ENST00000557030 A0A087WTM6 91 aa2.66□□□□□ -1.98
ATXN3-246ENST00000557030 KMT2AQ03164 3969 aa2.66□□□□□ -1.98
ATXN3-246ENST00000557030 DYNC1H1Q14204 4646 aaKnown RBP2.65□□□□□ -1.98
ATXN3-246ENST00000557030 A0A1B0GU69 56 aa2.65□□□□□ -1.99
ATXN3-246ENST00000557030 SPINK6Q6UWN8 80 aa2.65□□□□□ -1.99
ATXN3-246ENST00000557030 CAMK2N1Q7Z7J9 78 aa2.65□□□□□ -1.99
ATXN3-246ENST00000557030 IGLV7-43P04211 117 aa2.64□□□□□ -1.99
ATXN3-246ENST00000557030 LINC00313P59037 77 aa2.64□□□□□ -1.99
ATXN3-246ENST00000557030 Q5W150 140 aa2.64□□□□□ -1.99
ATXN3-246ENST00000557030 SPATA8Q6RVD6 105 aa2.64□□□□□ -1.99
ATXN3-246ENST00000557030 UQCR11O14957 56 aa2.63□□□□□ -1.99
ATXN3-246ENST00000557030 KRTAP10-1P60331 282 aa2.63□□□□□ -1.99
ATXN3-246ENST00000557030 CIRBP-AS1Q8TBR5 109 aa2.63□□□□□ -1.99
ATXN3-246ENST00000557030 DNAH5Q8TE73 4624 aa2.63□□□□□ -1.99
ATXN3-246ENST00000557030 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
ATXN3-246ENST00000557030 SRRM2Q9UQ35 2752 aaKnown RBP2.62□□□□□ -1.99
ATXN3-246ENST00000557030 FAT2Q9NYQ8 4349 aa2.62□□□□□ -1.99
ATXN3-246ENST00000557030 MIR22HGQ0VDD5 57 aa2.61□□□□□ -1.99
ATXN3-246ENST00000557030 HSPG2P98160 4391 aa2.6□□□□□ -1.99
ATXN3-246ENST00000557030 C1orf134Q5TEV5 83 aa2.6□□□□□ -1.99
ATXN3-246ENST00000557030 PKD1P98161 4303 aa2.6□□□□□ -1.99
ATXN3-246ENST00000557030 RETNLBQ9BQ08 111 aa2.59□□□□□ -1.99
ATXN3-246ENST00000557030 PKHD1P08F94 4074 aa2.59□□□□□ -2
ATXN3-246ENST00000557030 LINC01554Q52M75 96 aa2.58□□□□□ -2
ATXN3-246ENST00000557030 LY6G6CO95867 125 aa2.57□□□□□ -2
ATXN3-246ENST00000557030 LRP1BQ9NZR2 4599 aa2.57□□□□□ -2
ATXN3-246ENST00000557030 KRTAP13-2Q52LG2 175 aa2.55□□□□□ -2
ATXN3-246ENST00000557030 Q6ZSA8 131 aa2.55□□□□□ -2
ATXN3-246ENST00000557030 SPINK1P00995 79 aa2.54□□□□□ -2
ATXN3-246ENST00000557030 RPS29P62273 56 aaKnown RBP2.54□□□□□ -2
ATXN3-246ENST00000557030 APOBP04114 4563 aaKnown RBP2.52□□□□□ -2.01
ATXN3-246ENST00000557030 FSIP2Q5CZC0 6907 aa2.52□□□□□ -2.01
ATXN3-246ENST00000557030 ADM2Q7Z4H4 148 aa2.52□□□□□ -2.01
ATXN3-246ENST00000557030 CSAG1Q6PB30 78 aa2.51□□□□□ -2.01
ATXN3-246ENST00000557030 MYCBP2O75592 4640 aa2.5□□□□□ -2.01
ATXN3-246ENST00000557030 K7ERS5 55 aa2.5□□□□□ -2.01
ATXN3-246ENST00000557030 LUZP6Q538Z0 58 aa2.5□□□□□ -2.01
ATXN3-246ENST00000557030 PKHD1L1Q86WI1 4243 aa2.49□□□□□ -2.01
ATXN3-246ENST00000557030 PP632Q6XCG6 107 aa2.49□□□□□ -2.01
ATXN3-246ENST00000557030 VPS13BQ7Z7G8 4022 aa2.49□□□□□ -2.01
ATXN3-246ENST00000557030 FAT1Q14517 4588 aa2.48□□□□□ -2.01
ATXN3-246ENST00000557030 A0A1B0GU33 70 aa2.48□□□□□ -2.01
ATXN3-246ENST00000557030 A8MUU9 505 aa2.48□□□□□ -2.01
ATXN3-246ENST00000557030 LINC00304Q8N9R0 145 aa2.48□□□□□ -2.01
ATXN3-246ENST00000557030 KRTAP25-1Q3LHN0 102 aa2.47□□□□□ -2.01
ATXN3-246ENST00000557030 H1FX-AS1Q4G0G2 97 aa2.47□□□□□ -2.01
ATXN3-246ENST00000557030 C20orf166-AS1Q96NR2 134 aa2.47□□□□□ -2.01
ATXN3-246ENST00000557030 H0YAA0 97 aa2.46□□□□□ -2.02
ATXN3-246ENST00000557030 HMCN2Q8NDA2 5059 aa2.46□□□□□ -2.02
ATXN3-246ENST00000557030 RNF213Q63HN8 5207 aa2.45□□□□□ -2.02
ATXN3-246ENST00000557030 KRTAP10-4P60372 401 aaPredicted RBP2.45□□□□□ -2.02
ATXN3-246ENST00000557030 FAT4Q6V0I7 4981 aa2.43□□□□□ -2.02
ATXN3-246ENST00000557030 COX6B2Q6YFQ2 88 aa2.43□□□□□ -2.02
ATXN3-246ENST00000557030 CRCT1Q9UGL9 99 aa2.43□□□□□ -2.02
ATXN3-246ENST00000557030 SMR3BP02814 79 aaPredicted RBP2.42□□□□□ -2.02
ATXN3-246ENST00000557030 DMBT1Q9UGM3 2413 aaPredicted RBP2.4□□□□□ -2.02
ATXN3-246ENST00000557030 C9orf92A6NGG3 77 aa2.4□□□□□ -2.03
ATXN3-246ENST00000557030 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
ATXN3-246ENST00000557030 KRTAP10-10P60014 251 aa2.4□□□□□ -2.03
ATXN3-246ENST00000557030 ROMO1P60602 79 aa2.4□□□□□ -2.03
ATXN3-246ENST00000557030 RPL37P61927 97 aaKnown RBP2.39□□□□□ -2.03
ATXN3-246ENST00000557030 FAT3Q8TDW7 4589 aa2.38□□□□□ -2.03
ATXN3-246ENST00000557030 LRP1Q07954 4544 aaKnown RBP2.38□□□□□ -2.03
ATXN3-246ENST00000557030 TNXBP22105 4242 aa2.37□□□□□ -2.03
ATXN3-246ENST00000557030 FLG2Q5D862 2391 aaPredicted RBP2.37□□□□□ -2.03
ATXN3-246ENST00000557030 SPRR5A0A1B0GTR4 108 aa2.35□□□□□ -2.03
ATXN3-246ENST00000557030 S4R3F8 94 aa2.34□□□□□ -2.03
ATXN3-246ENST00000557030 LRP2P98164 4655 aa2.32□□□□□ -2.04
ATXN3-246ENST00000557030 CRIPTQ9P021 101 aa2.32□□□□□ -2.04
ATXN3-246ENST00000557030 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms