RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 FLNAP21333 2647 aaKnown RBP1.93□□□□□ -2.1
FOXN3-213ENST00000556916 SETD2Q9BYW2 2564 aaPredicted RBP1.93□□□□□ -2.1
FOXN3-213ENST00000556916 RPS29P62273 56 aaKnown RBP1.93□□□□□ -2.1
FOXN3-213ENST00000556916 LUZP6Q538Z0 58 aa1.93□□□□□ -2.1
FOXN3-213ENST00000556916 PDZD2O15018 2839 aa1.93□□□□□ -2.1
FOXN3-213ENST00000556916 PKD1L1Q8TDX9 2849 aa1.93□□□□□ -2.1
FOXN3-213ENST00000556916 HECTD1Q9ULT8 2610 aa1.92□□□□□ -2.1
FOXN3-213ENST00000556916 CENPEQ02224 2701 aa1.92□□□□□ -2.1
FOXN3-213ENST00000556916 J3QKU1 62 aa1.92□□□□□ -2.1
FOXN3-213ENST00000556916 MTORP42345 2549 aa1.91□□□□□ -2.1
FOXN3-213ENST00000556916 C10orf95Q9H7T3 257 aa1.91□□□□□ -2.1
FOXN3-213ENST00000556916 SRRM2Q9UQ35 2752 aaKnown RBP1.91□□□□□ -2.1
FOXN3-213ENST00000556916 POLQO75417 2590 aa1.91□□□□□ -2.1
FOXN3-213ENST00000556916 CCDC168Q8NDH2 2452 aa1.91□□□□□ -2.1
FOXN3-213ENST00000556916 NIPBLQ6KC79 2804 aaeCLIP1.9□□□□□ -2.1
FOXN3-213ENST00000556916 DNAH1Q9P2D7 4330 aa1.9□□□□□ -2.11
FOXN3-213ENST00000556916 CUBNO60494 3623 aa1.89□□□□□ -2.11
FOXN3-213ENST00000556916 VWFP04275 2813 aa1.89□□□□□ -2.11
FOXN3-213ENST00000556916 A0A0D9SG42 100 aa1.89□□□□□ -2.11
FOXN3-213ENST00000556916 KRTAP21-3Q3LHN1 58 aa1.89□□□□□ -2.11
FOXN3-213ENST00000556916 S4R3F8 94 aa1.89□□□□□ -2.11
FOXN3-213ENST00000556916 MEGF8Q7Z7M0 2845 aa1.88□□□□□ -2.11
FOXN3-213ENST00000556916 FLNCQ14315 2725 aa1.88□□□□□ -2.11
FOXN3-213ENST00000556916 COL6A5A8TX70 2615 aa1.87□□□□□ -2.11
FOXN3-213ENST00000556916 FLG2Q5D862 2391 aaPredicted RBP1.87□□□□□ -2.11
FOXN3-213ENST00000556916 TENM3Q9P273 2699 aa1.87□□□□□ -2.11
FOXN3-213ENST00000556916 KRTAP10-10P60014 251 aa1.87□□□□□ -2.11
FOXN3-213ENST00000556916 KRTAP13-4Q3LI77 160 aa1.87□□□□□ -2.11
FOXN3-213ENST00000556916 IGSF10Q6WRI0 2623 aa1.87□□□□□ -2.11
FOXN3-213ENST00000556916 ZNF469Q96JG9 3925 aaPredicted RBP1.86□□□□□ -2.11
FOXN3-213ENST00000556916 ACANP16112 2415 aa1.86□□□□□ -2.11
FOXN3-213ENST00000556916 C9orf92A6NGG3 77 aa1.85□□□□□ -2.11
FOXN3-213ENST00000556916 TRRAPQ9Y4A5 3859 aa1.84□□□□□ -2.11
FOXN3-213ENST00000556916 ANK2Q01484 3957 aa1.84□□□□□ -2.11
FOXN3-213ENST00000556916 KRTAP12-1P59990 96 aa1.84□□□□□ -2.11
FOXN3-213ENST00000556916 PLAC4Q8WY50 150 aa1.84□□□□□ -2.11
FOXN3-213ENST00000556916 DNAH3Q8TD57 4116 aa1.84□□□□□ -2.12
FOXN3-213ENST00000556916 NSD1Q96L73 2696 aaPredicted RBP1.84□□□□□ -2.12
FOXN3-213ENST00000556916 ITPR2Q14571 2701 aa1.83□□□□□ -2.12
FOXN3-213ENST00000556916 FRAS1Q86XX4 4008 aa1.83□□□□□ -2.12
FOXN3-213ENST00000556916 M0QZ58 72 aa1.83□□□□□ -2.12
FOXN3-213ENST00000556916 SPRR5A0A1B0GTR4 108 aa1.82□□□□□ -2.12
FOXN3-213ENST00000556916 TGP01266 2768 aa1.81□□□□□ -2.12
FOXN3-213ENST00000556916 NBEAL1Q6ZS30 2694 aa1.81□□□□□ -2.12
FOXN3-213ENST00000556916 TENM1Q9UKZ4 2725 aa1.81□□□□□ -2.12
FOXN3-213ENST00000556916 DNAH9Q9NYC9 4486 aa1.8□□□□□ -2.12
FOXN3-213ENST00000556916 CAMK2N1Q7Z7J9 78 aa1.8□□□□□ -2.12
FOXN3-213ENST00000556916 ATRQ13535 2644 aa1.79□□□□□ -2.12
FOXN3-213ENST00000556916 CSMD3Q7Z407 3707 aa1.79□□□□□ -2.12
FOXN3-213ENST00000556916 VPS13DQ5THJ4 4388 aa1.79□□□□□ -2.12
FOXN3-213ENST00000556916 PRKDCP78527 4128 aaKnown RBP1.78□□□□□ -2.12
FOXN3-213ENST00000556916 DNAH7Q8WXX0 4024 aa1.78□□□□□ -2.12
FOXN3-213ENST00000556916 DNAH10Q8IVF4 4471 aa1.78□□□□□ -2.13
FOXN3-213ENST00000556916 DNAH8Q96JB1 4490 aa1.78□□□□□ -2.13
FOXN3-213ENST00000556916 COL7A1Q02388 2944 aa1.77□□□□□ -2.13
FOXN3-213ENST00000556916 LYSTQ99698 3801 aa1.76□□□□□ -2.13
FOXN3-213ENST00000556916 NOTCH1P46531 2555 aa1.76□□□□□ -2.13
FOXN3-213ENST00000556916 HUWE1Q7Z6Z7 4374 aaKnown RBP1.76□□□□□ -2.13
FOXN3-213ENST00000556916 CMYA5Q8N3K9 4069 aa1.75□□□□□ -2.13
FOXN3-213ENST00000556916 DYNC2H1Q8NCM8 4307 aaKnown RBP1.75□□□□□ -2.13
FOXN3-213ENST00000556916 STAB1Q9NY15 2570 aa1.74□□□□□ -2.13
FOXN3-213ENST00000556916 STAB2Q8WWQ8 2551 aa1.73□□□□□ -2.13
FOXN3-213ENST00000556916 MGAM2Q2M2H8 2515 aa1.73□□□□□ -2.13
FOXN3-213ENST00000556916 DNAH17Q9UFH2 4485 aa1.73□□□□□ -2.13
FOXN3-213ENST00000556916 HECTD4Q9Y4D8 3996 aa1.73□□□□□ -2.13
FOXN3-213ENST00000556916 R4GN34 69 aa1.72□□□□□ -2.13
FOXN3-213ENST00000556916 DNAH6Q9C0G6 4158 aa1.72□□□□□ -2.13
FOXN3-213ENST00000556916 DNAH11Q96DT5 4516 aa1.71□□□□□ -2.14
FOXN3-213ENST00000556916 PRO2289Q9P1D8 64 aa1.71□□□□□ -2.14
FOXN3-213ENST00000556916 KMT2AQ03164 3969 aa1.69□□□□□ -2.14
FOXN3-213ENST00000556916 SMR3BP02814 79 aaPredicted RBP1.69□□□□□ -2.14
FOXN3-213ENST00000556916 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
FOXN3-213ENST00000556916 INE1O15225 51 aa1.68□□□□□ -2.14
FOXN3-213ENST00000556916 KRTAP10-4P60372 401 aaPredicted RBP1.67□□□□□ -2.14
FOXN3-213ENST00000556916 DMBT1Q9UGM3 2413 aaPredicted RBP1.66□□□□□ -2.14
FOXN3-213ENST00000556916 DNAH2Q9P225 4427 aa1.65□□□□□ -2.14
FOXN3-213ENST00000556916 SACSQ9NZJ4 4579 aa1.64□□□□□ -2.15
FOXN3-213ENST00000556916 DNHD1Q96M86 4753 aa1.63□□□□□ -2.15
FOXN3-213ENST00000556916 TNP1P09430 55 aa1.63□□□□□ -2.15
FOXN3-213ENST00000556916 PKD1P98161 4303 aa1.61□□□□□ -2.15
FOXN3-213ENST00000556916 PKHD1P08F94 4074 aa1.61□□□□□ -2.15
FOXN3-213ENST00000556916 PLECQ15149 4684 aaKnown RBP1.6□□□□□ -2.15
FOXN3-213ENST00000556916 Q5VSD8 79 aa1.6□□□□□ -2.15
FOXN3-213ENST00000556916 STARD9Q9P2P6 4700 aa1.58□□□□□ -2.16
FOXN3-213ENST00000556916 PKHD1L1Q86WI1 4243 aa1.58□□□□□ -2.16
FOXN3-213ENST00000556916 VPS13BQ7Z7G8 4022 aa1.57□□□□□ -2.16
FOXN3-213ENST00000556916 TNXBP22105 4242 aa1.56□□□□□ -2.16
FOXN3-213ENST00000556916 DNAH5Q8TE73 4624 aa1.56□□□□□ -2.16
FOXN3-213ENST00000556916 LRP1BQ9NZR2 4599 aa1.53□□□□□ -2.16
FOXN3-213ENST00000556916 LRP1Q07954 4544 aaKnown RBP1.53□□□□□ -2.16
FOXN3-213ENST00000556916 FAT2Q9NYQ8 4349 aa1.52□□□□□ -2.17
FOXN3-213ENST00000556916 MYCBP2O75592 4640 aa1.51□□□□□ -2.17
FOXN3-213ENST00000556916 MT1HL1P0DM35 61 aa1.51□□□□□ -2.17
FOXN3-213ENST00000556916 APOBP04114 4563 aaKnown RBP1.5□□□□□ -2.17
FOXN3-213ENST00000556916 FLGP20930 4061 aaPredicted RBP1.49□□□□□ -2.17
FOXN3-213ENST00000556916 PCLOQ9Y6V0 5065 aa1.49□□□□□ -2.17
FOXN3-213ENST00000556916 UBR4Q5T4S7 5183 aa1.49□□□□□ -2.17
FOXN3-213ENST00000556916 CRCT1Q9UGL9 99 aa1.49□□□□□ -2.17
FOXN3-213ENST00000556916 HSPG2P98160 4391 aa1.49□□□□□ -2.17
FOXN3-213ENST00000556916 BIRC6Q9NR09 4857 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms