RNA–Protein interactions for RNA: ENST00000556551.2

AC005520.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC005520.1, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005520.1-201ENST00000556551 FAT3Q8TDW7 4589 aa4.53□□□□□ -1.68
AC005520.1-201ENST00000556551 KRTAP10-8P60410 259 aa4.52□□□□□ -1.69
AC005520.1-201ENST00000556551 LPAP08519 4548 aa4.52□□□□□ -1.69
AC005520.1-201ENST00000556551 KRTAP3-3Q9BYR6 98 aa4.5□□□□□ -1.69
AC005520.1-201ENST00000556551 RYR2Q92736 4967 aa4.5□□□□□ -1.69
AC005520.1-201ENST00000556551 K7ERS5 55 aa4.49□□□□□ -1.69
AC005520.1-201ENST00000556551 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
AC005520.1-201ENST00000556551 A0A1B0GVY2 172 aa4.48□□□□□ -1.69
AC005520.1-201ENST00000556551 ROMO1P60602 79 aa4.48□□□□□ -1.69
AC005520.1-201ENST00000556551 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
AC005520.1-201ENST00000556551 TNXBP22105 4242 aa4.47□□□□□ -1.69
AC005520.1-201ENST00000556551 P0C880 135 aa4.47□□□□□ -1.69
AC005520.1-201ENST00000556551 KRTAP3-2Q9BYR7 98 aa4.44□□□□□ -1.7
AC005520.1-201ENST00000556551 RPL37P61927 97 aaKnown RBP4.44□□□□□ -1.7
AC005520.1-201ENST00000556551 LRP2P98164 4655 aa4.43□□□□□ -1.7
AC005520.1-201ENST00000556551 TPRXLQ17RH7 258 aa4.42□□□□□ -1.7
AC005520.1-201ENST00000556551 KIAA1109Q2LD37 5005 aa4.42□□□□□ -1.7
AC005520.1-201ENST00000556551 S4R3F8 94 aa4.42□□□□□ -1.7
AC005520.1-201ENST00000556551 XP32Q5T750 250 aa4.41□□□□□ -1.7
AC005520.1-201ENST00000556551 KRTAP17-1Q9BYP8 105 aa4.4□□□□□ -1.71
AC005520.1-201ENST00000556551 SPINT4Q6UDR6 99 aa4.39□□□□□ -1.71
AC005520.1-201ENST00000556551 RYR1P21817 5038 aa4.39□□□□□ -1.71
AC005520.1-201ENST00000556551 RYR3Q15413 4870 aa4.38□□□□□ -1.71
AC005520.1-201ENST00000556551 KRTAP12-2P59991 146 aa4.38□□□□□ -1.71
AC005520.1-201ENST00000556551 Q5VSD8 79 aa4.38□□□□□ -1.71
AC005520.1-201ENST00000556551 ABCA13Q86UQ4 5058 aa4.33□□□□□ -1.72
AC005520.1-201ENST00000556551 KRTAP12-1P59990 96 aa4.29□□□□□ -1.72
AC005520.1-201ENST00000556551 MT1HL1P0DM35 61 aa4.25□□□□□ -1.73
AC005520.1-201ENST00000556551 EPPK1P58107 5090 aaKnown RBP4.25□□□□□ -1.73
AC005520.1-201ENST00000556551 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
AC005520.1-201ENST00000556551 MUC2Q02817 5179 aa4.2□□□□□ -1.74
AC005520.1-201ENST00000556551 M0QZ58 72 aa4.2□□□□□ -1.74
AC005520.1-201ENST00000556551 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
AC005520.1-201ENST00000556551 LORP23490 312 aaPredicted RBP4.17□□□□□ -1.74
AC005520.1-201ENST00000556551 R4GN34 69 aa4.15□□□□□ -1.75
AC005520.1-201ENST00000556551 KRTAP4-5Q9BYR2 181 aa4.14□□□□□ -1.75
AC005520.1-201ENST00000556551 KRTAP21-3Q3LHN1 58 aa4.13□□□□□ -1.75
AC005520.1-201ENST00000556551 KRTAP4-1Q9BYQ7 146 aa4.08□□□□□ -1.76
AC005520.1-201ENST00000556551 MUC17Q685J3 4493 aa4.06□□□□□ -1.76
AC005520.1-201ENST00000556551 J3QL48 77 aa4.03□□□□□ -1.76
AC005520.1-201ENST00000556551 HERC2O95714 4834 aa4.01□□□□□ -1.77
AC005520.1-201ENST00000556551 PLAC4Q8WY50 150 aa3.99□□□□□ -1.77
AC005520.1-201ENST00000556551 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
AC005520.1-201ENST00000556551 FAT4Q6V0I7 4981 aa3.97□□□□□ -1.77
AC005520.1-201ENST00000556551 SEC61BP60468 96 aaKnown RBP3.96□□□□□ -1.78
AC005520.1-201ENST00000556551 PCLOQ9Y6V0 5065 aa3.95□□□□□ -1.78
AC005520.1-201ENST00000556551 LCE2DQ5TA82 110 aaPredicted RBP3.95□□□□□ -1.78
AC005520.1-201ENST00000556551 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
AC005520.1-201ENST00000556551 HERC1Q15751 4861 aa3.93□□□□□ -1.78
AC005520.1-201ENST00000556551 KRTAP19-2Q3LHN2 52 aa3.9□□□□□ -1.79
AC005520.1-201ENST00000556551 RNF213Q63HN8 5207 aa3.87□□□□□ -1.79
AC005520.1-201ENST00000556551 FLGP20930 4061 aaPredicted RBP3.85□□□□□ -1.79
AC005520.1-201ENST00000556551 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
AC005520.1-201ENST00000556551 BIRC6Q9NR09 4857 aa3.78□□□□□ -1.8
AC005520.1-201ENST00000556551 PP632Q6XCG6 107 aa3.77□□□□□ -1.81
AC005520.1-201ENST00000556551 TNP1P09430 55 aa3.76□□□□□ -1.81
AC005520.1-201ENST00000556551 HMCN2Q8NDA2 5059 aa3.75□□□□□ -1.81
AC005520.1-201ENST00000556551 UBR4Q5T4S7 5183 aa3.75□□□□□ -1.81
AC005520.1-201ENST00000556551 M0R2T5 61 aa3.69□□□□□ -1.82
AC005520.1-201ENST00000556551 LCE2CQ5TA81 110 aa3.65□□□□□ -1.82
AC005520.1-201ENST00000556551 KRTAP19-1Q8IUB9 90 aa3.65□□□□□ -1.83
AC005520.1-201ENST00000556551 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
AC005520.1-201ENST00000556551 KRTAP10-10P60014 251 aa3.59□□□□□ -1.83
AC005520.1-201ENST00000556551 SPRR2GQ9BYE4 73 aa3.58□□□□□ -1.84
AC005520.1-201ENST00000556551 SPRR5A0A1B0GTR4 108 aa3.57□□□□□ -1.84
AC005520.1-201ENST00000556551 MT1FP04733 61 aa3.57□□□□□ -1.84
AC005520.1-201ENST00000556551 MT1HP80294 61 aa3.56□□□□□ -1.84
AC005520.1-201ENST00000556551 MT2AP02795 61 aa3.53□□□□□ -1.84
AC005520.1-201ENST00000556551 KRTAP23-1A1A580 65 aa3.52□□□□□ -1.85
AC005520.1-201ENST00000556551 USH2AO75445 5202 aa3.52□□□□□ -1.85
AC005520.1-201ENST00000556551 KMT2DO14686 5537 aa3.49□□□□□ -1.85
AC005520.1-201ENST00000556551 KRTAP9-8Q9BYQ0 159 aa3.48□□□□□ -1.85
AC005520.1-201ENST00000556551 KRTAP10-5P60370 271 aa3.45□□□□□ -1.86
AC005520.1-201ENST00000556551 MT1XP80297 61 aa3.44□□□□□ -1.86
AC005520.1-201ENST00000556551 MT1BP07438 61 aa3.43□□□□□ -1.86
AC005520.1-201ENST00000556551 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
AC005520.1-201ENST00000556551 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
AC005520.1-201ENST00000556551 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
AC005520.1-201ENST00000556551 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
AC005520.1-201ENST00000556551 KRTAP19-8Q3LI54 63 aa3.38□□□□□ -1.87
AC005520.1-201ENST00000556551 KRTAP9-3Q9BYQ3 159 aa3.31□□□□□ -1.88
AC005520.1-201ENST00000556551 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
AC005520.1-201ENST00000556551 KRTAP4-6Q9BYQ5 205 aa3.29□□□□□ -1.88
AC005520.1-201ENST00000556551 LCE2BO14633 110 aa3.28□□□□□ -1.88
AC005520.1-201ENST00000556551 KRTAP19-5Q3LI72 72 aa3.28□□□□□ -1.89
AC005520.1-201ENST00000556551 FSIP2Q5CZC0 6907 aa3.27□□□□□ -1.89
AC005520.1-201ENST00000556551 KRTAP4-8A0A0G2JLE6 195 aa3.26□□□□□ -1.89
AC005520.1-201ENST00000556551 KRTAP4-8Q9BYQ9 185 aa3.26□□□□□ -1.89
AC005520.1-201ENST00000556551 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
AC005520.1-201ENST00000556551 KRTAP4-7Q9BYR0 210 aa3.21□□□□□ -1.9
AC005520.1-201ENST00000556551 LCE2AQ5TA79 106 aaPredicted RBP3.19□□□□□ -1.9
AC005520.1-201ENST00000556551 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
AC005520.1-201ENST00000556551 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
AC005520.1-201ENST00000556551 INE1O15225 51 aa3.18□□□□□ -1.9
AC005520.1-201ENST00000556551 KRTAP19-7Q3SYF9 63 aa3.06□□□□□ -1.92
AC005520.1-201ENST00000556551 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
AC005520.1-201ENST00000556551 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
AC005520.1-201ENST00000556551 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
AC005520.1-201ENST00000556551 FCGBPQ9Y6R7 5405 aaPredicted RBP3□□□□□ -1.93
AC005520.1-201ENST00000556551 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms