RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 ATXN8Q156A1 80 aa4.61□□□□□ -1.67
SCFD1-220ENST00000556486 ANAPC13Q9BS18 74 aa4.6□□□□□ -1.67
SCFD1-220ENST00000556486 KRTAP2-3P0C7H8 128 aa4.59□□□□□ -1.67
SCFD1-220ENST00000556486 NREPQ16612 68 aa4.59□□□□□ -1.67
SCFD1-220ENST00000556486 LUZP6Q538Z0 58 aa4.59□□□□□ -1.67
SCFD1-220ENST00000556486 KRTAP2-4Q9BYR9 128 aa4.59□□□□□ -1.67
SCFD1-220ENST00000556486 hDV103S1A0JD37 113 aa4.58□□□□□ -1.68
SCFD1-220ENST00000556486 KRTAP5-9P26371 169 aa4.58□□□□□ -1.68
SCFD1-220ENST00000556486 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-220ENST00000556486 C14orf132Q9NPU4 83 aa4.58□□□□□ -1.68
SCFD1-220ENST00000556486 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
SCFD1-220ENST00000556486 Q5W150 140 aa4.57□□□□□ -1.68
SCFD1-220ENST00000556486 C7orf65Q6ZTY9 151 aa4.57□□□□□ -1.68
SCFD1-220ENST00000556486 K7EQZ3 153 aa4.56□□□□□ -1.68
SCFD1-220ENST00000556486 M0R143 59 aa4.55□□□□□ -1.68
SCFD1-220ENST00000556486 MT1BP07438 61 aa4.54□□□□□ -1.68
SCFD1-220ENST00000556486 NAA38Q9BRA0 125 aaKnown RBP4.53□□□□□ -1.68
SCFD1-220ENST00000556486 SPRR2GQ9BYE4 73 aa4.51□□□□□ -1.69
SCFD1-220ENST00000556486 KRTAP19-8Q3LI54 63 aa4.5□□□□□ -1.69
SCFD1-220ENST00000556486 MP68P56378 58 aa4.49□□□□□ -1.69
SCFD1-220ENST00000556486 H3BT86 120 aa4.48□□□□□ -1.69
SCFD1-220ENST00000556486 KRTAP10-5P60370 271 aa4.48□□□□□ -1.69
SCFD1-220ENST00000556486 Q5VV11 94 aa4.48□□□□□ -1.69
SCFD1-220ENST00000556486 SPRR2EP22531 72 aa4.47□□□□□ -1.69
SCFD1-220ENST00000556486 SPRR2BP35325 72 aa4.47□□□□□ -1.69
SCFD1-220ENST00000556486 SPRR2AP35326 72 aa4.47□□□□□ -1.69
SCFD1-220ENST00000556486 CASC2Q6XLA1 102 aa4.47□□□□□ -1.69
SCFD1-220ENST00000556486 Q8N9L7 120 aa4.46□□□□□ -1.7
SCFD1-220ENST00000556486 SPANXA2-OT1Q8N9U9 137 aa4.46□□□□□ -1.7
SCFD1-220ENST00000556486 FAM236AA0A1B0GUQ0 79 aa4.45□□□□□ -1.7
SCFD1-220ENST00000556486 FAM236BA0A1B0GV22 79 aa4.45□□□□□ -1.7
SCFD1-220ENST00000556486 A8MU10 97 aa4.45□□□□□ -1.7
SCFD1-220ENST00000556486 HCG22E2RYF7 251 aa4.45□□□□□ -1.7
SCFD1-220ENST00000556486 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
SCFD1-220ENST00000556486 CSAG1Q6PB30 78 aa4.44□□□□□ -1.7
SCFD1-220ENST00000556486 SPRR2FQ96RM1 72 aa4.44□□□□□ -1.7
SCFD1-220ENST00000556486 S4R3F8 94 aa4.43□□□□□ -1.7
SCFD1-220ENST00000556486 LCA10Q71F78 164 aa4.41□□□□□ -1.7
SCFD1-220ENST00000556486 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
SCFD1-220ENST00000556486 SMIM6P0DI80 62 aa4.4□□□□□ -1.71
SCFD1-220ENST00000556486 KLKP1Q107X0 134 aa4.4□□□□□ -1.71
SCFD1-220ENST00000556486 A0A1W2PPM0 123 aa4.39□□□□□ -1.71
SCFD1-220ENST00000556486 C1orf64Q8NEQ6 169 aa4.39□□□□□ -1.71
SCFD1-220ENST00000556486 IMUPQ9GZP8 106 aa4.39□□□□□ -1.71
SCFD1-220ENST00000556486 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
SCFD1-220ENST00000556486 TSTD3H0UI37 97 aa4.36□□□□□ -1.71
SCFD1-220ENST00000556486 K7ERS5 55 aa4.36□□□□□ -1.71
SCFD1-220ENST00000556486 TAX1BP3O14907 124 aa4.36□□□□□ -1.71
SCFD1-220ENST00000556486 CRIPTQ9P021 101 aa4.36□□□□□ -1.71
SCFD1-220ENST00000556486 TP53AIP1Q9HCN2 124 aa4.35□□□□□ -1.71
SCFD1-220ENST00000556486 BATFQ16520 125 aa4.34□□□□□ -1.71
SCFD1-220ENST00000556486 UBL5Q9BZL1 73 aa4.34□□□□□ -1.71
SCFD1-220ENST00000556486 SPRR2DP22532 72 aa4.32□□□□□ -1.72
SCFD1-220ENST00000556486 SPCS1Q9Y6A9 102 aa4.29□□□□□ -1.72
SCFD1-220ENST00000556486 H0YAA0 97 aa4.28□□□□□ -1.72
SCFD1-220ENST00000556486 CYP4F30PQ9H0H9 118 aa4.28□□□□□ -1.72
SCFD1-220ENST00000556486 PRO0461Q9UI25 63 aa4.28□□□□□ -1.72
SCFD1-220ENST00000556486 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
SCFD1-220ENST00000556486 ADM2Q7Z4H4 148 aa4.27□□□□□ -1.73
SCFD1-220ENST00000556486 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
SCFD1-220ENST00000556486 A0A087WVE0 104 aa4.25□□□□□ -1.73
SCFD1-220ENST00000556486 A6NED7 52 aa4.23□□□□□ -1.73
SCFD1-220ENST00000556486 TRAV22A0A0B4J277 110 aa4.22□□□□□ -1.73
SCFD1-220ENST00000556486 LOC101927531A0A1B0GV80 90 aa4.22□□□□□ -1.73
SCFD1-220ENST00000556486 K7EP34 96 aa4.2□□□□□ -1.74
SCFD1-220ENST00000556486 PRO2289Q9P1D8 64 aa4.2□□□□□ -1.74
SCFD1-220ENST00000556486 NDUFC1O43677 76 aa4.19□□□□□ -1.74
SCFD1-220ENST00000556486 MT1XP80297 61 aa4.19□□□□□ -1.74
SCFD1-220ENST00000556486 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
SCFD1-220ENST00000556486 SPINT4Q6UDR6 99 aa4.18□□□□□ -1.74
SCFD1-220ENST00000556486 KRTAP12-2P59991 146 aa4.17□□□□□ -1.74
SCFD1-220ENST00000556486 COL5A1-AS1Q5SY13 56 aa4.17□□□□□ -1.74
SCFD1-220ENST00000556486 A8MUN3 132 aa4.16□□□□□ -1.74
SCFD1-220ENST00000556486 LOC105371267A0A1B0GV96 52 aa4.15□□□□□ -1.75
SCFD1-220ENST00000556486 F8W1H4 67 aa4.14□□□□□ -1.75
SCFD1-220ENST00000556486 ATOX1O00244 68 aa4.14□□□□□ -1.75
SCFD1-220ENST00000556486 UQCRQO14949 82 aa4.12□□□□□ -1.75
SCFD1-220ENST00000556486 ETDBQ3ZM63 59 aa4.12□□□□□ -1.75
SCFD1-220ENST00000556486 ACYP1P07311 99 aa4.11□□□□□ -1.75
SCFD1-220ENST00000556486 GTF2H5Q6ZYL4 71 aa4.11□□□□□ -1.75
SCFD1-220ENST00000556486 PLAC4Q8WY50 150 aa4.11□□□□□ -1.75
SCFD1-220ENST00000556486 H0Y9P7 68 aa4.09□□□□□ -1.75
SCFD1-220ENST00000556486 ATP5EP2Q5VTU8 51 aa4.09□□□□□ -1.75
SCFD1-220ENST00000556486 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
SCFD1-220ENST00000556486 R4GN34 69 aa4.06□□□□□ -1.76
SCFD1-220ENST00000556486 C20orf197Q8N268 126 aa4.05□□□□□ -1.76
SCFD1-220ENST00000556486 KRTAP25-1Q3LHN0 102 aa4.04□□□□□ -1.76
SCFD1-220ENST00000556486 P0C880 135 aa4.03□□□□□ -1.76
SCFD1-220ENST00000556486 A0A1B0GU33 70 aa4.02□□□□□ -1.77
SCFD1-220ENST00000556486 HIST1H4AP62805 103 aaKnown RBP4.02□□□□□ -1.77
SCFD1-220ENST00000556486 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
SCFD1-220ENST00000556486 LINC00208Q96KT6 92 aa4.01□□□□□ -1.77
SCFD1-220ENST00000556486 M0QZ58 72 aa4□□□□□ -1.77
SCFD1-220ENST00000556486 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
SCFD1-220ENST00000556486 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
SCFD1-220ENST00000556486 LINC00643Q86TS7 51 aa3.96□□□□□ -1.78
SCFD1-220ENST00000556486 DMAC1Q96GE9 116 aa3.96□□□□□ -1.78
SCFD1-220ENST00000556486 H3BPC8 53 aa3.94□□□□□ -1.78
SCFD1-220ENST00000556486 LINC01554Q52M75 96 aa3.92□□□□□ -1.78
SCFD1-220ENST00000556486 TRAV7A0A075B6U4 112 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms