RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 A8MUN3 132 aa2.63□□□□□ -1.99
ATXN3-241ENST00000556374 C8orf87E5RJ46 101 aa2.63□□□□□ -1.99
ATXN3-241ENST00000556374 KRTAP11-1Q8IUC1 163 aa2.63□□□□□ -1.99
ATXN3-241ENST00000556374 DNAH5Q8TE73 4624 aa2.62□□□□□ -1.99
ATXN3-241ENST00000556374 ZNF861PO60384 105 aa2.62□□□□□ -1.99
ATXN3-241ENST00000556374 Q6ZR54 194 aa2.62□□□□□ -1.99
ATXN3-241ENST00000556374 Q6ZRN7 208 aaPredicted RBP2.62□□□□□ -1.99
ATXN3-241ENST00000556374 Q75L30 129 aa2.62□□□□□ -1.99
ATXN3-241ENST00000556374 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
ATXN3-241ENST00000556374 SPINK6Q6UWN8 80 aa2.61□□□□□ -1.99
ATXN3-241ENST00000556374 CIRBP-AS1Q8TBR5 109 aa2.61□□□□□ -1.99
ATXN3-241ENST00000556374 PLAC8Q9NZF1 115 aa2.61□□□□□ -1.99
ATXN3-241ENST00000556374 PSORS1C2Q9UIG4 136 aa2.61□□□□□ -1.99
ATXN3-241ENST00000556374 SRRM2Q9UQ35 2752 aaKnown RBP2.6□□□□□ -1.99
ATXN3-241ENST00000556374 PANO1I0J062 215 aa2.6□□□□□ -1.99
ATXN3-241ENST00000556374 CD164Q04900 197 aa2.6□□□□□ -1.99
ATXN3-241ENST00000556374 PMAIP1Q13794 54 aa2.6□□□□□ -1.99
ATXN3-241ENST00000556374 C1orf134Q5TEV5 83 aa2.6□□□□□ -1.99
ATXN3-241ENST00000556374 Q5VV11 94 aa2.6□□□□□ -1.99
ATXN3-241ENST00000556374 Q96NJ1 140 aa2.6□□□□□ -1.99
ATXN3-241ENST00000556374 VPS13BQ7Z7G8 4022 aa2.6□□□□□ -1.99
ATXN3-241ENST00000556374 IGLV7-43P04211 117 aa2.59□□□□□ -1.99
ATXN3-241ENST00000556374 KRTAP13-3Q3SY46 172 aa2.59□□□□□ -1.99
ATXN3-241ENST00000556374 ASB16-AS1Q495Z4 193 aa2.59□□□□□ -1.99
ATXN3-241ENST00000556374 SSBP3-AS1Q7Z2R9 100 aa2.59□□□□□ -1.99
ATXN3-241ENST00000556374 SPTSSBQ8NFR3 76 aa2.59□□□□□ -1.99
ATXN3-241ENST00000556374 FAT1Q14517 4588 aa2.58□□□□□ -2
ATXN3-241ENST00000556374 ACYP2P14621 99 aa2.58□□□□□ -2
ATXN3-241ENST00000556374 CDC42SE1Q9NRR8 79 aa2.58□□□□□ -2
ATXN3-241ENST00000556374 LINC01558Q9Y6Z2 57 aa2.58□□□□□ -2
ATXN3-241ENST00000556374 Q5VSD8 79 aa2.57□□□□□ -2
ATXN3-241ENST00000556374 SPAG11AQ6PDA7 123 aa2.57□□□□□ -2
ATXN3-241ENST00000556374 ATP11AUNQ6ZP68 121 aa2.57□□□□□ -2
ATXN3-241ENST00000556374 LINC00313P59037 77 aa2.56□□□□□ -2
ATXN3-241ENST00000556374 KTN1-AS1Q86SY8 53 aa2.56□□□□□ -2
ATXN3-241ENST00000556374 FAT4Q6V0I7 4981 aa2.56□□□□□ -2
ATXN3-241ENST00000556374 A8MU10 97 aa2.55□□□□□ -2
ATXN3-241ENST00000556374 HRES1P13985 223 aa2.55□□□□□ -2
ATXN3-241ENST00000556374 ANAPC11Q9NYG5 84 aa2.55□□□□□ -2
ATXN3-241ENST00000556374 MUC2Q02817 5179 aa2.54□□□□□ -2
ATXN3-241ENST00000556374 A0A1B0GU69 56 aa2.54□□□□□ -2
ATXN3-241ENST00000556374 Q5W150 140 aa2.53□□□□□ -2
ATXN3-241ENST00000556374 DMAC1Q96GE9 116 aa2.53□□□□□ -2
ATXN3-241ENST00000556374 PKHD1L1Q86WI1 4243 aa2.53□□□□□ -2.01
ATXN3-241ENST00000556374 LRP2P98164 4655 aa2.53□□□□□ -2.01
ATXN3-241ENST00000556374 C7orf65Q6ZTY9 151 aa2.52□□□□□ -2.01
ATXN3-241ENST00000556374 RETNLBQ9BQ08 111 aa2.51□□□□□ -2.01
ATXN3-241ENST00000556374 A6NN06 94 aa2.5□□□□□ -2.01
ATXN3-241ENST00000556374 SPINK7P58062 85 aa2.5□□□□□ -2.01
ATXN3-241ENST00000556374 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
ATXN3-241ENST00000556374 LCA10Q71F78 164 aa2.5□□□□□ -2.01
ATXN3-241ENST00000556374 TYMSOSQ8TAI1 123 aa2.5□□□□□ -2.01
ATXN3-241ENST00000556374 LRP1Q07954 4544 aaKnown RBP2.49□□□□□ -2.01
ATXN3-241ENST00000556374 UQCR11O14957 56 aa2.49□□□□□ -2.01
ATXN3-241ENST00000556374 SPINK1P00995 79 aa2.49□□□□□ -2.01
ATXN3-241ENST00000556374 KRTAP12-2P59991 146 aa2.49□□□□□ -2.01
ATXN3-241ENST00000556374 KRTAP10-8P60410 259 aa2.49□□□□□ -2.01
ATXN3-241ENST00000556374 FAT3Q8TDW7 4589 aa2.49□□□□□ -2.01
ATXN3-241ENST00000556374 MIR22HGQ0VDD5 57 aa2.48□□□□□ -2.01
ATXN3-241ENST00000556374 SMR3BP02814 79 aaPredicted RBP2.47□□□□□ -2.01
ATXN3-241ENST00000556374 KRTAP1-4P0C5Y4 121 aa2.47□□□□□ -2.01
ATXN3-241ENST00000556374 KRTAP13-2Q52LG2 175 aa2.47□□□□□ -2.01
ATXN3-241ENST00000556374 Q6ZSA8 131 aa2.47□□□□□ -2.01
ATXN3-241ENST00000556374 RPS29P62273 56 aaKnown RBP2.46□□□□□ -2.02
ATXN3-241ENST00000556374 LINC00304Q8N9R0 145 aa2.46□□□□□ -2.02
ATXN3-241ENST00000556374 RBM12B-AS1Q9P1G2 102 aa2.46□□□□□ -2.02
ATXN3-241ENST00000556374 KRTAP10-1P60331 282 aa2.45□□□□□ -2.02
ATXN3-241ENST00000556374 TNXBP22105 4242 aa2.44□□□□□ -2.02
ATXN3-241ENST00000556374 PRAC1Q96KF2 57 aa2.44□□□□□ -2.02
ATXN3-241ENST00000556374 SPATA8Q6RVD6 105 aa2.43□□□□□ -2.02
ATXN3-241ENST00000556374 K7ERS5 55 aa2.41□□□□□ -2.02
ATXN3-241ENST00000556374 CRCT1Q9UGL9 99 aa2.41□□□□□ -2.02
ATXN3-241ENST00000556374 DNAH8Q96JB1 4490 aa2.4□□□□□ -2.03
ATXN3-241ENST00000556374 FSIP2Q5CZC0 6907 aa2.39□□□□□ -2.03
ATXN3-241ENST00000556374 C9orf92A6NGG3 77 aa2.38□□□□□ -2.03
ATXN3-241ENST00000556374 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
ATXN3-241ENST00000556374 C20orf166-AS1Q96NR2 134 aa2.38□□□□□ -2.03
ATXN3-241ENST00000556374 A8MUU9 505 aa2.37□□□□□ -2.03
ATXN3-241ENST00000556374 MT1HL1P0DM35 61 aa2.37□□□□□ -2.03
ATXN3-241ENST00000556374 KRTAP10-4P60372 401 aaPredicted RBP2.37□□□□□ -2.03
ATXN3-241ENST00000556374 A0A1B0GU33 70 aa2.36□□□□□ -2.03
ATXN3-241ENST00000556374 LINC01554Q52M75 96 aa2.36□□□□□ -2.03
ATXN3-241ENST00000556374 H1FX-AS1Q4G0G2 97 aa2.35□□□□□ -2.03
ATXN3-241ENST00000556374 CSAG1Q6PB30 78 aa2.33□□□□□ -2.04
ATXN3-241ENST00000556374 COX6B2Q6YFQ2 88 aa2.33□□□□□ -2.04
ATXN3-241ENST00000556374 ADM2Q7Z4H4 148 aa2.33□□□□□ -2.04
ATXN3-241ENST00000556374 LPAP08519 4548 aa2.33□□□□□ -2.04
ATXN3-241ENST00000556374 H0YAA0 97 aa2.31□□□□□ -2.04
ATXN3-241ENST00000556374 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
ATXN3-241ENST00000556374 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
ATXN3-241ENST00000556374 S4R3F8 94 aa2.3□□□□□ -2.04
ATXN3-241ENST00000556374 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
ATXN3-241ENST00000556374 RPL37P61927 97 aaKnown RBP2.28□□□□□ -2.04
ATXN3-241ENST00000556374 KRTAP25-1Q3LHN0 102 aa2.28□□□□□ -2.04
ATXN3-241ENST00000556374 ROMO1P60602 79 aa2.26□□□□□ -2.05
ATXN3-241ENST00000556374 A0A0D9SG42 100 aa2.22□□□□□ -2.05
ATXN3-241ENST00000556374 SPINT4Q6UDR6 99 aa2.2□□□□□ -2.06
ATXN3-241ENST00000556374 CRIPTQ9P021 101 aa2.2□□□□□ -2.06
ATXN3-241ENST00000556374 MUC17Q685J3 4493 aa2.18□□□□□ -2.06
ATXN3-241ENST00000556374 M0QZ58 72 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms