RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 ZNF469Q96JG9 3925 aaPredicted RBP0.88□□□□□ -2.27
MTHFD1-212ENST00000555858 RELNP78509 3460 aa0.88□□□□□ -2.27
MTHFD1-212ENST00000555858 COL6A5A8TX70 2615 aa0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 HRNRQ86YZ3 2850 aaPredicted RBP0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 CELSR1Q9NYQ6 3014 aa0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 MAP1AP78559 2803 aaPredicted RBP0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 ITPR2Q14571 2701 aa0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 KRTAP2-3P0C7H8 128 aa0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 DEFB133Q30KQ1 61 aa0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 KRTAP2-4Q9BYR9 128 aa0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 KRTAP2-1Q9BYU5 128 aa0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 MAST4O15021 2626 aa0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 DNAH8Q96JB1 4490 aa0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 DNAH3Q8TD57 4116 aa0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 HIVEP3Q5T1R4 2406 aa0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 MYO18BQ8IUG5 2567 aa0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 USP9XQ93008 2570 aaPredicted RBP0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 SPTAN1Q13813 2472 aaKnown RBP0.87□□□□□ -2.27
MTHFD1-212ENST00000555858 LRRK2Q5S007 2527 aa0.86□□□□□ -2.27
MTHFD1-212ENST00000555858 CSMD1Q96PZ7 3565 aa0.86□□□□□ -2.27
MTHFD1-212ENST00000555858 POLQO75417 2590 aa0.86□□□□□ -2.27
MTHFD1-212ENST00000555858 DNHD1Q96M86 4753 aa0.86□□□□□ -2.27
MTHFD1-212ENST00000555858 FASNP49327 2511 aaKnown RBP0.86□□□□□ -2.27
MTHFD1-212ENST00000555858 SRRM2Q9UQ35 2752 aaKnown RBP0.85□□□□□ -2.27
MTHFD1-212ENST00000555858 ANKHD1Q8IWZ3 2542 aaKnown RBP0.85□□□□□ -2.27
MTHFD1-212ENST00000555858 ZANQ9Y493 2812 aa0.85□□□□□ -2.27
MTHFD1-212ENST00000555858 TEX15Q9BXT5 2789 aa0.85□□□□□ -2.27
MTHFD1-212ENST00000555858 SACSQ9NZJ4 4579 aa0.85□□□□□ -2.27
MTHFD1-212ENST00000555858 ADGRG4Q8IZF6 3080 aa0.85□□□□□ -2.27
MTHFD1-212ENST00000555858 UNC79Q9P2D8 2635 aa0.85□□□□□ -2.27
MTHFD1-212ENST00000555858 PDZD2O15018 2839 aa0.84□□□□□ -2.27
MTHFD1-212ENST00000555858 CSMD2Q7Z408 3487 aa0.84□□□□□ -2.27
MTHFD1-212ENST00000555858 DNAH10Q8IVF4 4471 aa0.84□□□□□ -2.27
MTHFD1-212ENST00000555858 HUWE1Q7Z6Z7 4374 aaKnown RBP0.84□□□□□ -2.27
MTHFD1-212ENST00000555858 PRKDCP78527 4128 aaKnown RBP0.84□□□□□ -2.27
MTHFD1-212ENST00000555858 APCP25054 2843 aa0.84□□□□□ -2.28
MTHFD1-212ENST00000555858 DNAH1Q9P2D7 4330 aa0.84□□□□□ -2.28
MTHFD1-212ENST00000555858 USP9YO00507 2555 aaPredicted RBP0.84□□□□□ -2.28
MTHFD1-212ENST00000555858 FLNBO75369 2602 aaKnown RBP0.84□□□□□ -2.28
MTHFD1-212ENST00000555858 FBN2P35556 2912 aa0.83□□□□□ -2.28
MTHFD1-212ENST00000555858 DYNC2H1Q8NCM8 4307 aaKnown RBP0.83□□□□□ -2.28
MTHFD1-212ENST00000555858 KRTAP8-1Q8IUC2 63 aa0.83□□□□□ -2.28
MTHFD1-212ENST00000555858 DNAH7Q8WXX0 4024 aa0.83□□□□□ -2.28
MTHFD1-212ENST00000555858 DNAH2Q9P225 4427 aa0.83□□□□□ -2.28
MTHFD1-212ENST00000555858 DNAH9Q9NYC9 4486 aa0.83□□□□□ -2.28
MTHFD1-212ENST00000555858 NF1P21359 2839 aa0.83□□□□□ -2.28
MTHFD1-212ENST00000555858 TEP1Q99973 2627 aaKnown RBP0.83□□□□□ -2.28
MTHFD1-212ENST00000555858 NSD1Q96L73 2696 aaPredicted RBP0.82□□□□□ -2.28
MTHFD1-212ENST00000555858 CSMD3Q7Z407 3707 aa0.82□□□□□ -2.28
MTHFD1-212ENST00000555858 MXRA5Q9NR99 2828 aa0.82□□□□□ -2.28
MTHFD1-212ENST00000555858 KRTAP21-2Q3LI59 83 aa0.82□□□□□ -2.28
MTHFD1-212ENST00000555858 DOPEY1Q5JWR5 2465 aa0.82□□□□□ -2.28
MTHFD1-212ENST00000555858 SVEP1Q4LDE5 3571 aa0.82□□□□□ -2.28
MTHFD1-212ENST00000555858 CUBNO60494 3623 aa0.82□□□□□ -2.28
MTHFD1-212ENST00000555858 DNAH6Q9C0G6 4158 aa0.82□□□□□ -2.28
MTHFD1-212ENST00000555858 ITPR3Q14573 2671 aa0.82□□□□□ -2.28
MTHFD1-212ENST00000555858 HIVEP1P15822 2718 aa0.81□□□□□ -2.28
MTHFD1-212ENST00000555858 SMR3AQ99954 134 aa0.81□□□□□ -2.28
MTHFD1-212ENST00000555858 SONP18583 2426 aaKnown RBP0.81□□□□□ -2.28
MTHFD1-212ENST00000555858 MYO9AB2RTY4 2548 aa0.81□□□□□ -2.28
MTHFD1-212ENST00000555858 MTORP42345 2549 aa0.81□□□□□ -2.28
MTHFD1-212ENST00000555858 TLN2Q9Y4G6 2542 aa0.81□□□□□ -2.28
MTHFD1-212ENST00000555858 NIPBLQ6KC79 2804 aaeCLIP0.81□□□□□ -2.28
MTHFD1-212ENST00000555858 PKD1L1Q8TDX9 2849 aa0.81□□□□□ -2.28
MTHFD1-212ENST00000555858 TENM1Q9UKZ4 2725 aa0.8□□□□□ -2.28
MTHFD1-212ENST00000555858 PLECQ15149 4684 aaKnown RBP0.8□□□□□ -2.28
MTHFD1-212ENST00000555858 ACANP16112 2415 aa0.8□□□□□ -2.28
MTHFD1-212ENST00000555858 SPG11Q96JI7 2443 aa0.8□□□□□ -2.28
MTHFD1-212ENST00000555858 FLNAP21333 2647 aaKnown RBP0.8□□□□□ -2.28
MTHFD1-212ENST00000555858 U3KQA8 63 aa0.8□□□□□ -2.28
MTHFD1-212ENST00000555858 APOBP04114 4563 aaKnown RBP0.8□□□□□ -2.28
MTHFD1-212ENST00000555858 TRRAPQ9Y4A5 3859 aa0.8□□□□□ -2.28
MTHFD1-212ENST00000555858 FBN3Q75N90 2809 aa0.79□□□□□ -2.28
MTHFD1-212ENST00000555858 FAT3Q8TDW7 4589 aa0.79□□□□□ -2.28
MTHFD1-212ENST00000555858 KMT2AQ03164 3969 aa0.79□□□□□ -2.28
MTHFD1-212ENST00000555858 ATRQ13535 2644 aa0.79□□□□□ -2.28
MTHFD1-212ENST00000555858 NBEAL1Q6ZS30 2694 aa0.79□□□□□ -2.28
MTHFD1-212ENST00000555858 PKHD1L1Q86WI1 4243 aa0.79□□□□□ -2.28
MTHFD1-212ENST00000555858 HTN3P15516 51 aa0.79□□□□□ -2.28
MTHFD1-212ENST00000555858 VPS13BQ7Z7G8 4022 aa0.79□□□□□ -2.28
MTHFD1-212ENST00000555858 FRAS1Q86XX4 4008 aa0.79□□□□□ -2.28
MTHFD1-212ENST00000555858 DNAH17Q9UFH2 4485 aa0.78□□□□□ -2.28
MTHFD1-212ENST00000555858 LYSTQ99698 3801 aa0.78□□□□□ -2.28
MTHFD1-212ENST00000555858 TNXBP22105 4242 aa0.78□□□□□ -2.28
MTHFD1-212ENST00000555858 STAB1Q9NY15 2570 aa0.78□□□□□ -2.28
MTHFD1-212ENST00000555858 COL7A1Q02388 2944 aa0.77□□□□□ -2.29
MTHFD1-212ENST00000555858 CRCT1Q9UGL9 99 aa0.77□□□□□ -2.29
MTHFD1-212ENST00000555858 DYNC1H1Q14204 4646 aaKnown RBP0.77□□□□□ -2.29
MTHFD1-212ENST00000555858 FAT2Q9NYQ8 4349 aa0.77□□□□□ -2.29
MTHFD1-212ENST00000555858 HSPG2P98160 4391 aa0.76□□□□□ -2.29
MTHFD1-212ENST00000555858 HECTD4Q9Y4D8 3996 aa0.76□□□□□ -2.29
MTHFD1-212ENST00000555858 TGP01266 2768 aa0.76□□□□□ -2.29
MTHFD1-212ENST00000555858 DNAH5Q8TE73 4624 aa0.76□□□□□ -2.29
MTHFD1-212ENST00000555858 STARD9Q9P2P6 4700 aa0.76□□□□□ -2.29
MTHFD1-212ENST00000555858 NOTCH1P46531 2555 aa0.75□□□□□ -2.29
MTHFD1-212ENST00000555858 MGAM2Q2M2H8 2515 aa0.75□□□□□ -2.29
MTHFD1-212ENST00000555858 KMT2CQ8NEZ4 4911 aaKnown RBP0.75□□□□□ -2.29
MTHFD1-212ENST00000555858 PKHD1P08F94 4074 aa0.75□□□□□ -2.29
MTHFD1-212ENST00000555858 RYR3Q15413 4870 aa0.75□□□□□ -2.29
MTHFD1-212ENST00000555858 PKD1P98161 4303 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms