RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 KIF14Q15058 1648 aa-2.4□□□□□ -2.79
SNX6-204ENST00000555541 AKAP12Q02952 1782 aa-2.41□□□□□ -2.8
SNX6-204ENST00000555541 MAP3K4Q9Y6R4 1608 aa-2.42□□□□□ -2.8
SNX6-204ENST00000555541 DEFB121Q5J5C9 76 aa-2.43□□□□□ -2.8
SNX6-204ENST00000555541 VPS13CQ709C8 3753 aa-2.44□□□□□ -2.8
SNX6-204ENST00000555541 S100A8P05109 93 aa-2.44□□□□□ -2.8
SNX6-204ENST00000555541 MED14O60244 1454 aa-2.45□□□□□ -2.8
SNX6-204ENST00000555541 ABRACLQ9P1F3 81 aa-2.45□□□□□ -2.8
SNX6-204ENST00000555541 PPLO60437 1756 aa-2.46□□□□□ -2.8
SNX6-204ENST00000555541 ABCC3O15438 1527 aa-2.46□□□□□ -2.8
SNX6-204ENST00000555541 CFAP54Q96N23 3096 aa-2.46□□□□□ -2.8
SNX6-204ENST00000555541 V9GYS6 101 aa-2.46□□□□□ -2.8
SNX6-204ENST00000555541 ASXL1Q8IXJ9 1541 aa-2.47□□□□□ -2.8
SNX6-204ENST00000555541 VPS8Q8N3P4 1428 aa-2.47□□□□□ -2.8
SNX6-204ENST00000555541 CEP350Q5VT06 3117 aa-2.48□□□□□ -2.81
SNX6-204ENST00000555541 DNMBPQ6XZF7 1577 aa-2.48□□□□□ -2.81
SNX6-204ENST00000555541 TDRG1Q3Y452 100 aa-2.48□□□□□ -2.81
SNX6-204ENST00000555541 ABCC6O95255 1503 aa-2.48□□□□□ -2.81
SNX6-204ENST00000555541 TTC37Q6PGP7 1564 aa-2.49□□□□□ -2.81
SNX6-204ENST00000555541 RPS29P62273 56 aaKnown RBP-2.49□□□□□ -2.81
SNX6-204ENST00000555541 CRYBG3Q68DQ2 2970 aa-2.49□□□□□ -2.81
SNX6-204ENST00000555541 KAAG1Q9UBP8 84 aa-2.49□□□□□ -2.81
SNX6-204ENST00000555541 MYO5CQ9NQX4 1742 aa-2.49□□□□□ -2.81
SNX6-204ENST00000555541 WDFY3Q8IZQ1 3526 aa-2.5□□□□□ -2.81
SNX6-204ENST00000555541 DEFB136Q30KP8 78 aa-2.5□□□□□ -2.81
SNX6-204ENST00000555541 LEAP2Q969E1 77 aa-2.5□□□□□ -2.81
SNX6-204ENST00000555541 NHSQ6T4R5 1651 aa-2.5□□□□□ -2.81
SNX6-204ENST00000555541 LMTK2Q8IWU2 1503 aa-2.51□□□□□ -2.81
SNX6-204ENST00000555541 WDFY4Q6ZS81 3184 aa-2.51□□□□□ -2.81
SNX6-204ENST00000555541 H3BUT2 72 aa-2.51□□□□□ -2.81
SNX6-204ENST00000555541 H3BVH4 76 aa-2.51□□□□□ -2.81
SNX6-204ENST00000555541 DEFB114Q30KQ6 69 aa-2.51□□□□□ -2.81
SNX6-204ENST00000555541 UACAQ9BZF9 1416 aa-2.51□□□□□ -2.81
SNX6-204ENST00000555541 DCHS1Q96JQ0 3298 aa-2.51□□□□□ -2.81
SNX6-204ENST00000555541 ADIRFQ15847 76 aa-2.52□□□□□ -2.81
SNX6-204ENST00000555541 ST20Q9HBF5 79 aa-2.52□□□□□ -2.81
SNX6-204ENST00000555541 CLASP1Q7Z460 1538 aa-2.52□□□□□ -2.81
SNX6-204ENST00000555541 EIF2AK4Q9P2K8 1649 aaKnown RBP-2.53□□□□□ -2.82
SNX6-204ENST00000555541 EP400Q96L91 3159 aa-2.54□□□□□ -2.82
SNX6-204ENST00000555541 RRBP1Q9P2E9 1410 aaKnown RBP-2.55□□□□□ -2.82
SNX6-204ENST00000555541 PREX2Q70Z35 1606 aa-2.57□□□□□ -2.82
SNX6-204ENST00000555541 MROH1Q8NDA8 1641 aa-2.58□□□□□ -2.82
SNX6-204ENST00000555541 ABCC1P33527 1531 aa-2.59□□□□□ -2.82
SNX6-204ENST00000555541 DIP2AQ14689 1571 aa-2.6□□□□□ -2.83
SNX6-204ENST00000555541 SMIM27A0A1W2PRY6 76 aa-2.6□□□□□ -2.83
SNX6-204ENST00000555541 S100A13Q99584 98 aa-2.61□□□□□ -2.83
SNX6-204ENST00000555541 CROCC2H7BZ55 1655 aa-2.61□□□□□ -2.83
SNX6-204ENST00000555541 GLI2P10070 1586 aa-2.61□□□□□ -2.83
SNX6-204ENST00000555541 MUC3AQ02505 3323 aa-2.62□□□□□ -2.83
SNX6-204ENST00000555541 C3P01024 1663 aa-2.63□□□□□ -2.83
SNX6-204ENST00000555541 KIF21BO75037 1637 aa-2.63□□□□□ -2.83
SNX6-204ENST00000555541 ATXN8Q156A1 80 aa-2.63□□□□□ -2.83
SNX6-204ENST00000555541 WFDC10BQ8IUB3 73 aa-2.63□□□□□ -2.83
SNX6-204ENST00000555541 ANKARQ7Z5J8 1434 aa-2.64□□□□□ -2.83
SNX6-204ENST00000555541 FAM208AQ9UK61 1670 aaKnown RBP-2.64□□□□□ -2.83
SNX6-204ENST00000555541 TIAM1Q13009 1591 aa-2.65□□□□□ -2.83
SNX6-204ENST00000555541 C18orf32Q8TCD1 76 aa-2.66□□□□□ -2.84
SNX6-204ENST00000555541 MKI67P46013 3256 aaKnown RBP-2.67□□□□□ -2.84
SNX6-204ENST00000555541 K7EMI3 77 aa-2.68□□□□□ -2.84
SNX6-204ENST00000555541 POLR2KP53803 58 aaKnown RBP-2.68□□□□□ -2.84
SNX6-204ENST00000555541 LINC00308Q8TCZ7 52 aa-2.68□□□□□ -2.84
SNX6-204ENST00000555541 DCAF1Q9Y4B6 1507 aa-2.68□□□□□ -2.84
SNX6-204ENST00000555541 TMEM167BQ9NRX6 74 aa-2.69□□□□□ -2.84
SNX6-204ENST00000555541 FRYLO94915 3013 aa-2.69□□□□□ -2.84
SNX6-204ENST00000555541 PCNTO95613 3336 aa-2.7□□□□□ -2.84
SNX6-204ENST00000555541 MADDQ8WXG6 1647 aa-2.71□□□□□ -2.84
SNX6-204ENST00000555541 GNG13Q9P2W3 67 aa-2.71□□□□□ -2.84
SNX6-204ENST00000555541 PEG3Q9GZU2 1588 aa-2.71□□□□□ -2.84
SNX6-204ENST00000555541 CFAP74Q9C0B2 1584 aa-2.73□□□□□ -2.85
SNX6-204ENST00000555541 SZT2Q5T011 3432 aa-2.73□□□□□ -2.85
SNX6-204ENST00000555541 HILPDAQ9Y5L2 63 aa-2.73□□□□□ -2.85
SNX6-204ENST00000555541 LOC400499M0QZD8 3231 aa-2.74□□□□□ -2.85
SNX6-204ENST00000555541 DNAH14Q0VDD8 3507 aa-2.74□□□□□ -2.85
SNX6-204ENST00000555541 M0R1W7 72 aa-2.75□□□□□ -2.85
SNX6-204ENST00000555541 NMES1Q9C002 83 aa-2.76□□□□□ -2.85
SNX6-204ENST00000555541 CFAP47Q6ZTR5 3102 aa-2.79□□□□□ -2.86
SNX6-204ENST00000555541 LINC01549A6NIU2 74 aa-2.81□□□□□ -2.86
SNX6-204ENST00000555541 DEFB131AP59861 70 aa-2.81□□□□□ -2.86
SNX6-204ENST00000555541 SERF2P84101 59 aa-2.81□□□□□ -2.86
SNX6-204ENST00000555541 VCANP13611 3396 aa-2.82□□□□□ -2.86
SNX6-204ENST00000555541 EEA1Q15075 1411 aa-2.82□□□□□ -2.86
SNX6-204ENST00000555541 EFCAB6Q5THR3 1501 aa-2.83□□□□□ -2.86
SNX6-204ENST00000555541 CEP250Q9BV73 2442 aa-2.84□□□□□ -2.86
SNX6-204ENST00000555541 ALS2Q96Q42 1657 aa-2.85□□□□□ -2.87
SNX6-204ENST00000555541 ABCA8O94911 1581 aa-2.87□□□□□ -2.87
SNX6-204ENST00000555541 USP34Q70CQ2 3546 aa-2.87□□□□□ -2.87
SNX6-204ENST00000555541 GNG2P59768 71 aa-2.88□□□□□ -2.87
SNX6-204ENST00000555541 UNC80Q8N2C7 3258 aa-2.88□□□□□ -2.87
SNX6-204ENST00000555541 CCDC18Q5T9S5 1454 aa-2.89□□□□□ -2.87
SNX6-204ENST00000555541 ABCA9Q8IUA7 1624 aa-2.9□□□□□ -2.87
SNX6-204ENST00000555541 IGIPA6NJ69 53 aa-2.91□□□□□ -2.88
SNX6-204ENST00000555541 S100ZQ8WXG8 99 aa-2.91□□□□□ -2.88
SNX6-204ENST00000555541 H0YGX0 51 aa-2.94□□□□□ -2.88
SNX6-204ENST00000555541 ABCA6Q8N139 1617 aa-2.96□□□□□ -2.88
SNX6-204ENST00000555541 DUOX2Q9NRD8 1548 aa-2.97□□□□□ -2.88
SNX6-204ENST00000555541 SYCP2Q9BX26 1530 aa-3□□□□□ -2.89
SNX6-204ENST00000555541 TFF3Q07654 80 aa-3.01□□□□□ -2.89
SNX6-204ENST00000555541 KRTAP19-2Q3LHN2 52 aa-3.01□□□□□ -2.89
SNX6-204ENST00000555541 TTTY10Q9BZA0 68 aa-3.01□□□□□ -2.89
SNX6-204ENST00000555541 IQGAP3Q86VI3 1631 aa-3.01□□□□□ -2.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms