RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 CRYM-AS1A6NIL9 109 aa-0.73□□□□□ -2.53
SCFD1-214ENST00000554819 ATP6V1G2-DDX39BF2Z307 99 aa-0.73□□□□□ -2.53
SCFD1-214ENST00000554819 H7BZZ5 65 aa-0.73□□□□□ -2.53
SCFD1-214ENST00000554819 I3L3M4 83 aa-0.73□□□□□ -2.53
SCFD1-214ENST00000554819 CORTO00230 105 aa-0.73□□□□□ -2.53
SCFD1-214ENST00000554819 PPP3R1P63098 170 aa-0.73□□□□□ -2.53
SCFD1-214ENST00000554819 DEFB106AQ8N104 65 aa-0.73□□□□□ -2.53
SCFD1-214ENST00000554819 COX14Q96I36 57 aa-0.73□□□□□ -2.53
SCFD1-214ENST00000554819 CGREF1Q99674 301 aa-0.73□□□□□ -2.53
SCFD1-214ENST00000554819 NDUFC1O43677 76 aa-0.74□□□□□ -2.53
SCFD1-214ENST00000554819 RPS27P42677 84 aaKnown RBP-0.74□□□□□ -2.53
SCFD1-214ENST00000554819 KRTDAPP60985 99 aa-0.74□□□□□ -2.53
SCFD1-214ENST00000554819 DEFB114Q30KQ6 69 aa-0.74□□□□□ -2.53
SCFD1-214ENST00000554819 MRPL34Q9BQ48 92 aaKnown RBP-0.74□□□□□ -2.53
SCFD1-214ENST00000554819 RABAC1Q9UI14 185 aa-0.74□□□□□ -2.53
SCFD1-214ENST00000554819 A0A1B0GV90 55 aa-0.75□□□□□ -2.53
SCFD1-214ENST00000554819 C7orf77A4D0Y5 90 aa-0.75□□□□□ -2.53
SCFD1-214ENST00000554819 TMEM262E9PQX1 116 aa-0.75□□□□□ -2.53
SCFD1-214ENST00000554819 H3BQF6 201 aa-0.75□□□□□ -2.53
SCFD1-214ENST00000554819 A0A0G2JND7 137 aa-0.76□□□□□ -2.53
SCFD1-214ENST00000554819 H0Y9P7 68 aa-0.76□□□□□ -2.53
SCFD1-214ENST00000554819 M0QY20 66 aa-0.76□□□□□ -2.53
SCFD1-214ENST00000554819 S100PP25815 95 aa-0.76□□□□□ -2.53
SCFD1-214ENST00000554819 SNCAP37840 140 aa-0.76□□□□□ -2.53
SCFD1-214ENST00000554819 DEFB131AP59861 70 aa-0.76□□□□□ -2.53
SCFD1-214ENST00000554819 WT1-ASQ06250 92 aa-0.76□□□□□ -2.53
SCFD1-214ENST00000554819 HSD52Q0P140 79 aa-0.76□□□□□ -2.53
SCFD1-214ENST00000554819 HEPN1Q6WQI6 88 aa-0.76□□□□□ -2.53
SCFD1-214ENST00000554819 VAMP8Q9BV40 100 aa-0.76□□□□□ -2.53
SCFD1-214ENST00000554819 NOP10Q9NPE3 64 aaKnown RBP-0.76□□□□□ -2.53
SCFD1-214ENST00000554819 hADV29S1A0JD25 119 aa-0.77□□□□□ -2.53
SCFD1-214ENST00000554819 ENHOQ6UWT2 76 aa-0.77□□□□□ -2.53
SCFD1-214ENST00000554819 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.77□□□□□ -2.53
SCFD1-214ENST00000554819 HILPDAQ9Y5L2 63 aa-0.77□□□□□ -2.53
SCFD1-214ENST00000554819 TRBV25-1A0A075B6N4 114 aa-0.78□□□□□ -2.53
SCFD1-214ENST00000554819 TRAV30A0A087WSZ9 112 aa-0.78□□□□□ -2.53
SCFD1-214ENST00000554819 C3orf79P0CE67 100 aa-0.78□□□□□ -2.53
SCFD1-214ENST00000554819 S100A1P23297 94 aa-0.78□□□□□ -2.53
SCFD1-214ENST00000554819 POLR2KP53803 58 aaKnown RBP-0.78□□□□□ -2.53
SCFD1-214ENST00000554819 PSMG4Q5JS54 123 aa-0.78□□□□□ -2.53
SCFD1-214ENST00000554819 DEFB107AQ8IZN7 70 aa-0.78□□□□□ -2.53
SCFD1-214ENST00000554819 C2orf88Q9BSF0 95 aa-0.78□□□□□ -2.53
SCFD1-214ENST00000554819 CACFD1Q9UGQ2 172 aa-0.78□□□□□ -2.53
SCFD1-214ENST00000554819 ARMS2P0C7Q2 107 aa-0.79□□□□□ -2.54
SCFD1-214ENST00000554819 GNGT1P63211 74 aa-0.79□□□□□ -2.54
SCFD1-214ENST00000554819 TMEM203Q969S6 136 aa-0.79□□□□□ -2.54
SCFD1-214ENST00000554819 Q9Y3F1 56 aa-0.79□□□□□ -2.54
SCFD1-214ENST00000554819 SPTY2D1-AS1A0A0U1RR47 76 aa-0.8□□□□□ -2.54
SCFD1-214ENST00000554819 ACYP1P07311 99 aa-0.8□□□□□ -2.54
SCFD1-214ENST00000554819 MRPS10P82664 201 aaKnown RBP-0.8□□□□□ -2.54
SCFD1-214ENST00000554819 PMCHL1Q16048 86 aa-0.8□□□□□ -2.54
SCFD1-214ENST00000554819 CDKN2A-AS1Q9UH64 79 aa-0.8□□□□□ -2.54
SCFD1-214ENST00000554819 GNG8Q9UK08 70 aa-0.8□□□□□ -2.54
SCFD1-214ENST00000554819 D6R8Y8 96 aa-0.81□□□□□ -2.54
SCFD1-214ENST00000554819 MPC2O95563 127 aa-0.81□□□□□ -2.54
SCFD1-214ENST00000554819 GTF2H5Q6ZYL4 71 aa-0.81□□□□□ -2.54
SCFD1-214ENST00000554819 MUSTN1Q8IVN3 82 aa-0.81□□□□□ -2.54
SCFD1-214ENST00000554819 HIGD1BQ9P298 99 aa-0.81□□□□□ -2.54
SCFD1-214ENST00000554819 TRBV7-7A0A0K0K1E9 115 aa-0.82□□□□□ -2.54
SCFD1-214ENST00000554819 ETDCA0A1B0GVM5 59 aa-0.82□□□□□ -2.54
SCFD1-214ENST00000554819 LINC00587B1AMM8 73 aa-0.82□□□□□ -2.54
SCFD1-214ENST00000554819 M0R1W7 72 aa-0.82□□□□□ -2.54
SCFD1-214ENST00000554819 GYPAP02724 150 aa-0.82□□□□□ -2.54
SCFD1-214ENST00000554819 TRGV9Q99603 122 aa-0.82□□□□□ -2.54
SCFD1-214ENST00000554819 C6orf48Q9UBA6 75 aa-0.82□□□□□ -2.54
SCFD1-214ENST00000554819 GCC2Q8IWJ2 1684 aa-0.83□□□□□ -2.54
SCFD1-214ENST00000554819 A0A087WWC5 75 aa-0.83□□□□□ -2.54
SCFD1-214ENST00000554819 NDUFA1O15239 70 aa-0.83□□□□□ -2.54
SCFD1-214ENST00000554819 IAPPP10997 89 aa-0.83□□□□□ -2.54
SCFD1-214ENST00000554819 ALKAL2Q6UX46 152 aa-0.83□□□□□ -2.54
SCFD1-214ENST00000554819 TMEM167AQ8TBQ9 72 aa-0.83□□□□□ -2.54
SCFD1-214ENST00000554819 SMIM2Q9BVW6 85 aa-0.83□□□□□ -2.54
SCFD1-214ENST00000554819 GNGT2O14610 69 aa-0.84□□□□□ -2.54
SCFD1-214ENST00000554819 PRCDQ00LT1 54 aa-0.84□□□□□ -2.54
SCFD1-214ENST00000554819 LINC01590Q5TEZ4 76 aa-0.84□□□□□ -2.54
SCFD1-214ENST00000554819 MINOS1Q5TGZ0 78 aa-0.84□□□□□ -2.54
SCFD1-214ENST00000554819 TRAV21A0A0B4J279 112 aa-0.85□□□□□ -2.55
SCFD1-214ENST00000554819 NDUFA3O95167 84 aa-0.85□□□□□ -2.55
SCFD1-214ENST00000554819 S100A8P05109 93 aa-0.85□□□□□ -2.55
SCFD1-214ENST00000554819 PKIAP61925 76 aa-0.85□□□□□ -2.55
SCFD1-214ENST00000554819 PLGLAQ15195 96 aa-0.85□□□□□ -2.55
SCFD1-214ENST00000554819 KAAG1Q9UBP8 84 aa-0.85□□□□□ -2.55
SCFD1-214ENST00000554819 H3BUA1 57 aa-0.86□□□□□ -2.55
SCFD1-214ENST00000554819 HMGN3Q15651 99 aa-0.86□□□□□ -2.55
SCFD1-214ENST00000554819 SERP2Q8N6R1 65 aa-0.86□□□□□ -2.55
SCFD1-214ENST00000554819 TOMM7Q9P0U1 55 aa-0.86□□□□□ -2.55
SCFD1-214ENST00000554819 AP4S1Q9Y587 144 aa-0.86□□□□□ -2.55
SCFD1-214ENST00000554819 ATOX1O00244 68 aa-0.87□□□□□ -2.55
SCFD1-214ENST00000554819 IGLC2P0DOY2 106 aa-0.87□□□□□ -2.55
SCFD1-214ENST00000554819 IGLC3P0DOY3 106 aa-0.87□□□□□ -2.55
SCFD1-214ENST00000554819 NMSQ5H8A3 153 aa-0.87□□□□□ -2.55
SCFD1-214ENST00000554819 NCBP2-AS2Q69YL0 99 aa-0.87□□□□□ -2.55
SCFD1-214ENST00000554819 GAFA1Q96PS6 74 aa-0.87□□□□□ -2.55
SCFD1-214ENST00000554819 PMCHL2Q9BQD1 86 aa-0.87□□□□□ -2.55
SCFD1-214ENST00000554819 PSENENQ9NZ42 101 aa-0.87□□□□□ -2.55
SCFD1-214ENST00000554819 H3BUT2 72 aa-0.88□□□□□ -2.55
SCFD1-214ENST00000554819 MRPL33O75394 65 aaKnown RBP-0.88□□□□□ -2.55
SCFD1-214ENST00000554819 FCER1GP30273 86 aa-0.88□□□□□ -2.55
SCFD1-214ENST00000554819 LINC00158P58513 81 aa-0.88□□□□□ -2.55
SCFD1-214ENST00000554819 ETDBQ3ZM63 59 aa-0.88□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms