RNA–Protein interactions for RNA: ENST00000553175.5

LETMD1-237, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-237ENST00000553175 NBEAL2Q6ZNJ1 2754 aa1.88□□□□□ -2.11
LETMD1-237ENST00000553175 CFAP46Q8IYW2 2715 aa1.88□□□□□ -2.11
LETMD1-237ENST00000553175 KRTAP12-1P59990 96 aa1.88□□□□□ -2.11
LETMD1-237ENST00000553175 RPS29P62273 56 aaKnown RBP1.88□□□□□ -2.11
LETMD1-237ENST00000553175 R4GN34 69 aa1.88□□□□□ -2.11
LETMD1-237ENST00000553175 ANK3Q12955 4377 aaKnown RBP1.88□□□□□ -2.11
LETMD1-237ENST00000553175 UBR5O95071 2799 aaPredicted RBP1.87□□□□□ -2.11
LETMD1-237ENST00000553175 SRRM2Q9UQ35 2752 aaKnown RBP1.87□□□□□ -2.11
LETMD1-237ENST00000553175 ITPR3Q14573 2671 aa1.87□□□□□ -2.11
LETMD1-237ENST00000553175 APLNQ9ULZ1 77 aa1.87□□□□□ -2.11
LETMD1-237ENST00000553175 SONP18583 2426 aaKnown RBP1.87□□□□□ -2.11
LETMD1-237ENST00000553175 VPS13DQ5THJ4 4388 aa1.86□□□□□ -2.11
LETMD1-237ENST00000553175 DNHD1Q96M86 4753 aa1.86□□□□□ -2.11
LETMD1-237ENST00000553175 VPS13CQ709C8 3753 aa1.86□□□□□ -2.11
LETMD1-237ENST00000553175 TRRAPQ9Y4A5 3859 aa1.86□□□□□ -2.11
LETMD1-237ENST00000553175 A0A0D9SG42 100 aa1.85□□□□□ -2.11
LETMD1-237ENST00000553175 M0QZ58 72 aa1.85□□□□□ -2.11
LETMD1-237ENST00000553175 INE1O15225 51 aa1.85□□□□□ -2.11
LETMD1-237ENST00000553175 MTORP42345 2549 aa1.85□□□□□ -2.11
LETMD1-237ENST00000553175 FCGBPQ9Y6R7 5405 aaPredicted RBP1.84□□□□□ -2.11
LETMD1-237ENST00000553175 USP9YO00507 2555 aaPredicted RBP1.84□□□□□ -2.11
LETMD1-237ENST00000553175 CRYBG3Q68DQ2 2970 aa1.84□□□□□ -2.12
LETMD1-237ENST00000553175 POLQO75417 2590 aa1.84□□□□□ -2.12
LETMD1-237ENST00000553175 NIPBLQ6KC79 2804 aaeCLIP1.82□□□□□ -2.12
LETMD1-237ENST00000553175 FBN1P35555 2871 aaKnown RBP1.82□□□□□ -2.12
LETMD1-237ENST00000553175 HIVEP1P15822 2718 aa1.82□□□□□ -2.12
LETMD1-237ENST00000553175 VWFP04275 2813 aa1.81□□□□□ -2.12
LETMD1-237ENST00000553175 MEGF8Q7Z7M0 2845 aa1.81□□□□□ -2.12
LETMD1-237ENST00000553175 DNAH8Q96JB1 4490 aa1.8□□□□□ -2.12
LETMD1-237ENST00000553175 LRRK2Q5S007 2527 aa1.8□□□□□ -2.12
LETMD1-237ENST00000553175 UBE2DNLQ8IWF7 75 aa1.8□□□□□ -2.12
LETMD1-237ENST00000553175 LYSTQ99698 3801 aa1.79□□□□□ -2.12
LETMD1-237ENST00000553175 CCDC168Q8NDH2 2452 aa1.79□□□□□ -2.12
LETMD1-237ENST00000553175 CENPEQ02224 2701 aa1.79□□□□□ -2.12
LETMD1-237ENST00000553175 ZANQ9Y493 2812 aa1.79□□□□□ -2.12
LETMD1-237ENST00000553175 ANK2Q01484 3957 aa1.79□□□□□ -2.12
LETMD1-237ENST00000553175 ITPR2Q14571 2701 aa1.78□□□□□ -2.12
LETMD1-237ENST00000553175 FRAS1Q86XX4 4008 aa1.78□□□□□ -2.12
LETMD1-237ENST00000553175 SETD2Q9BYW2 2564 aaPredicted RBP1.78□□□□□ -2.12
LETMD1-237ENST00000553175 DNAH3Q8TD57 4116 aa1.77□□□□□ -2.13
LETMD1-237ENST00000553175 SMR3AQ99954 134 aa1.77□□□□□ -2.13
LETMD1-237ENST00000553175 DYNC2H1Q8NCM8 4307 aaKnown RBP1.77□□□□□ -2.13
LETMD1-237ENST00000553175 FLNCQ14315 2725 aa1.77□□□□□ -2.13
LETMD1-237ENST00000553175 CSMD2Q7Z408 3487 aa1.77□□□□□ -2.13
LETMD1-237ENST00000553175 HMCN1Q96RW7 5635 aa1.76□□□□□ -2.13
LETMD1-237ENST00000553175 ACANP16112 2415 aa1.76□□□□□ -2.13
LETMD1-237ENST00000553175 PDZD2O15018 2839 aa1.76□□□□□ -2.13
LETMD1-237ENST00000553175 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
LETMD1-237ENST00000553175 COL6A5A8TX70 2615 aa1.76□□□□□ -2.13
LETMD1-237ENST00000553175 DNAH10Q8IVF4 4471 aa1.76□□□□□ -2.13
LETMD1-237ENST00000553175 DNAH17Q9UFH2 4485 aa1.76□□□□□ -2.13
LETMD1-237ENST00000553175 TGP01266 2768 aa1.75□□□□□ -2.13
LETMD1-237ENST00000553175 CUBNO60494 3623 aa1.74□□□□□ -2.13
LETMD1-237ENST00000553175 NBEAL1Q6ZS30 2694 aa1.74□□□□□ -2.13
LETMD1-237ENST00000553175 PKD1L1Q8TDX9 2849 aa1.74□□□□□ -2.13
LETMD1-237ENST00000553175 DNAH2Q9P225 4427 aa1.74□□□□□ -2.13
LETMD1-237ENST00000553175 DNAH9Q9NYC9 4486 aa1.74□□□□□ -2.13
LETMD1-237ENST00000553175 DNAH7Q8WXX0 4024 aa1.73□□□□□ -2.13
LETMD1-237ENST00000553175 CSMD3Q7Z407 3707 aa1.73□□□□□ -2.13
LETMD1-237ENST00000553175 CMYA5Q8N3K9 4069 aa1.73□□□□□ -2.13
LETMD1-237ENST00000553175 TENM3Q9P273 2699 aa1.73□□□□□ -2.13
LETMD1-237ENST00000553175 DNAH6Q9C0G6 4158 aa1.72□□□□□ -2.13
LETMD1-237ENST00000553175 DNAH11Q96DT5 4516 aa1.72□□□□□ -2.13
LETMD1-237ENST00000553175 ATRQ13535 2644 aa1.71□□□□□ -2.13
LETMD1-237ENST00000553175 HECTD4Q9Y4D8 3996 aa1.71□□□□□ -2.14
LETMD1-237ENST00000553175 PRKDCP78527 4128 aaKnown RBP1.71□□□□□ -2.14
LETMD1-237ENST00000553175 MYCBP2O75592 4640 aa1.7□□□□□ -2.14
LETMD1-237ENST00000553175 Q5VSD8 79 aa1.7□□□□□ -2.14
LETMD1-237ENST00000553175 DMBT1Q9UGM3 2413 aaPredicted RBP1.7□□□□□ -2.14
LETMD1-237ENST00000553175 SACSQ9NZJ4 4579 aa1.7□□□□□ -2.14
LETMD1-237ENST00000553175 C9orf92A6NGG3 77 aa1.69□□□□□ -2.14
LETMD1-237ENST00000553175 STAB2Q8WWQ8 2551 aa1.68□□□□□ -2.14
LETMD1-237ENST00000553175 NSD1Q96L73 2696 aaPredicted RBP1.68□□□□□ -2.14
LETMD1-237ENST00000553175 STAB1Q9NY15 2570 aa1.68□□□□□ -2.14
LETMD1-237ENST00000553175 FLNAP21333 2647 aaKnown RBP1.67□□□□□ -2.14
LETMD1-237ENST00000553175 HUWE1Q7Z6Z7 4374 aaKnown RBP1.67□□□□□ -2.14
LETMD1-237ENST00000553175 COL7A1Q02388 2944 aa1.67□□□□□ -2.14
LETMD1-237ENST00000553175 BIRC6Q9NR09 4857 aa1.66□□□□□ -2.14
LETMD1-237ENST00000553175 ZNF469Q96JG9 3925 aaPredicted RBP1.66□□□□□ -2.14
LETMD1-237ENST00000553175 NOTCH1P46531 2555 aa1.65□□□□□ -2.14
LETMD1-237ENST00000553175 RYR3Q15413 4870 aa1.64□□□□□ -2.15
LETMD1-237ENST00000553175 KMT2AQ03164 3969 aa1.64□□□□□ -2.15
LETMD1-237ENST00000553175 TENM1Q9UKZ4 2725 aa1.63□□□□□ -2.15
LETMD1-237ENST00000553175 KMT2CQ8NEZ4 4911 aaKnown RBP1.63□□□□□ -2.15
LETMD1-237ENST00000553175 MGAM2Q2M2H8 2515 aa1.62□□□□□ -2.15
LETMD1-237ENST00000553175 TNP1P09430 55 aa1.61□□□□□ -2.15
LETMD1-237ENST00000553175 EPPK1P58107 5090 aaKnown RBP1.6□□□□□ -2.15
LETMD1-237ENST00000553175 LRP1Q07954 4544 aaKnown RBP1.6□□□□□ -2.15
LETMD1-237ENST00000553175 PCLOQ9Y6V0 5065 aa1.6□□□□□ -2.15
LETMD1-237ENST00000553175 PKHD1L1Q86WI1 4243 aa1.59□□□□□ -2.15
LETMD1-237ENST00000553175 PLECQ15149 4684 aaKnown RBP1.59□□□□□ -2.15
LETMD1-237ENST00000553175 APOBP04114 4563 aaKnown RBP1.59□□□□□ -2.16
LETMD1-237ENST00000553175 HYDINQ4G0P3 5121 aa1.59□□□□□ -2.16
LETMD1-237ENST00000553175 LRP1BQ9NZR2 4599 aa1.58□□□□□ -2.16
LETMD1-237ENST00000553175 KRTAP10-4P60372 401 aaPredicted RBP1.57□□□□□ -2.16
LETMD1-237ENST00000553175 DNAH5Q8TE73 4624 aa1.57□□□□□ -2.16
LETMD1-237ENST00000553175 PKD1P98161 4303 aa1.55□□□□□ -2.16
LETMD1-237ENST00000553175 KRTAP12-3P60328 96 aa1.55□□□□□ -2.16
LETMD1-237ENST00000553175 HERC2O95714 4834 aa1.55□□□□□ -2.16
LETMD1-237ENST00000553175 PKHD1P08F94 4074 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms