RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 MRPL34Q9BQ48 92 aaKnown RBP3.08□□□□□ -1.92
LETMD1-233ENST00000552433 I3L2K1 104 aa3.07□□□□□ -1.92
LETMD1-233ENST00000552433 LYNX1P0DP58 116 aa3.06□□□□□ -1.92
LETMD1-233ENST00000552433 RPS27P42677 84 aaKnown RBP3.06□□□□□ -1.92
LETMD1-233ENST00000552433 PIGYQ3MUY2 71 aa3.05□□□□□ -1.92
LETMD1-233ENST00000552433 SPINK9Q5DT21 86 aa3.05□□□□□ -1.92
LETMD1-233ENST00000552433 STARD9Q9P2P6 4700 aa3.04□□□□□ -1.92
LETMD1-233ENST00000552433 PCOTHQ58A44 107 aa3.04□□□□□ -1.92
LETMD1-233ENST00000552433 UNQ6190/PRO20217Q6UXQ8 127 aa3.04□□□□□ -1.92
LETMD1-233ENST00000552433 ALMS1Q8TCU4 4167 aa3.03□□□□□ -1.92
LETMD1-233ENST00000552433 DEFB108BQ8NET1 73 aa3.03□□□□□ -1.92
LETMD1-233ENST00000552433 H0YAA0 97 aa3.02□□□□□ -1.93
LETMD1-233ENST00000552433 ABCA13Q86UQ4 5058 aa3.02□□□□□ -1.93
LETMD1-233ENST00000552433 DMBT1Q9UGM3 2413 aaPredicted RBP3.02□□□□□ -1.93
LETMD1-233ENST00000552433 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
LETMD1-233ENST00000552433 WFDC13Q8IUB5 93 aa3.01□□□□□ -1.93
LETMD1-233ENST00000552433 BRD3OSQ6XYD6 125 aa3□□□□□ -1.93
LETMD1-233ENST00000552433 UBR4Q5T4S7 5183 aa3□□□□□ -1.93
LETMD1-233ENST00000552433 WFDC10BQ8IUB3 73 aa2.99□□□□□ -1.93
LETMD1-233ENST00000552433 M0QY20 66 aa2.98□□□□□ -1.93
LETMD1-233ENST00000552433 DEFB131AP59861 70 aa2.98□□□□□ -1.93
LETMD1-233ENST00000552433 HUWE1Q7Z6Z7 4374 aaKnown RBP2.97□□□□□ -1.93
LETMD1-233ENST00000552433 Q6ZSA8 131 aa2.96□□□□□ -1.94
LETMD1-233ENST00000552433 LEAP2Q969E1 77 aa2.96□□□□□ -1.94
LETMD1-233ENST00000552433 KMT2AQ03164 3969 aa2.95□□□□□ -1.94
LETMD1-233ENST00000552433 PKHD1P08F94 4074 aa2.94□□□□□ -1.94
LETMD1-233ENST00000552433 HERC1Q15751 4861 aa2.94□□□□□ -1.94
LETMD1-233ENST00000552433 KRTAP10-10P60014 251 aa2.93□□□□□ -1.94
LETMD1-233ENST00000552433 H1FX-AS1Q4G0G2 97 aa2.92□□□□□ -1.94
LETMD1-233ENST00000552433 PLECQ15149 4684 aaKnown RBP2.92□□□□□ -1.94
LETMD1-233ENST00000552433 COX6A2Q02221 97 aa2.91□□□□□ -1.94
LETMD1-233ENST00000552433 TMEM167AQ8TBQ9 72 aa2.91□□□□□ -1.94
LETMD1-233ENST00000552433 H3BUX3 64 aa2.9□□□□□ -1.95
LETMD1-233ENST00000552433 DNAH10Q8IVF4 4471 aa2.9□□□□□ -1.95
LETMD1-233ENST00000552433 KAAG1Q9UBP8 84 aa2.89□□□□□ -1.95
LETMD1-233ENST00000552433 MMP24-AS1A0A0U1RRL7 71 aa2.88□□□□□ -1.95
LETMD1-233ENST00000552433 KRTAP13-4Q3LI77 160 aa2.88□□□□□ -1.95
LETMD1-233ENST00000552433 DNAH6Q9C0G6 4158 aa2.87□□□□□ -1.95
LETMD1-233ENST00000552433 DEFB130BP0DP73 79 aa2.86□□□□□ -1.95
LETMD1-233ENST00000552433 DEFB130AP0DP74 79 aa2.86□□□□□ -1.95
LETMD1-233ENST00000552433 C10orf95Q9H7T3 257 aa2.86□□□□□ -1.95
LETMD1-233ENST00000552433 HSPG2P98160 4391 aa2.85□□□□□ -1.95
LETMD1-233ENST00000552433 FLG2Q5D862 2391 aaPredicted RBP2.85□□□□□ -1.95
LETMD1-233ENST00000552433 H3BUA1 57 aa2.85□□□□□ -1.95
LETMD1-233ENST00000552433 K7EIM0 57 aa2.85□□□□□ -1.95
LETMD1-233ENST00000552433 WT1-ASQ06250 92 aa2.84□□□□□ -1.95
LETMD1-233ENST00000552433 SRRM2Q9UQ35 2752 aaKnown RBP2.83□□□□□ -1.96
LETMD1-233ENST00000552433 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
LETMD1-233ENST00000552433 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
LETMD1-233ENST00000552433 DNAH11Q96DT5 4516 aa2.81□□□□□ -1.96
LETMD1-233ENST00000552433 TOMM7Q9P0U1 55 aa2.81□□□□□ -1.96
LETMD1-233ENST00000552433 DYNC1H1Q14204 4646 aaKnown RBP2.8□□□□□ -1.96
LETMD1-233ENST00000552433 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
LETMD1-233ENST00000552433 LELP1Q5T871 98 aa2.8□□□□□ -1.96
LETMD1-233ENST00000552433 FAT2Q9NYQ8 4349 aa2.8□□□□□ -1.96
LETMD1-233ENST00000552433 DEFB136Q30KP8 78 aa2.79□□□□□ -1.96
LETMD1-233ENST00000552433 DNAH2Q9P225 4427 aa2.78□□□□□ -1.96
LETMD1-233ENST00000552433 VPS13DQ5THJ4 4388 aa2.77□□□□□ -1.97
LETMD1-233ENST00000552433 RPL39P5Q59GN2 51 aa2.77□□□□□ -1.97
LETMD1-233ENST00000552433 CLPSL2Q6UWE3 100 aa2.77□□□□□ -1.97
LETMD1-233ENST00000552433 MYCBP2O75592 4640 aa2.76□□□□□ -1.97
LETMD1-233ENST00000552433 PKD1P98161 4303 aa2.76□□□□□ -1.97
LETMD1-233ENST00000552433 SPRR1AP35321 89 aa2.75□□□□□ -1.97
LETMD1-233ENST00000552433 Q5VSD8 79 aa2.75□□□□□ -1.97
LETMD1-233ENST00000552433 DNAH17Q9UFH2 4485 aa2.74□□□□□ -1.97
LETMD1-233ENST00000552433 PRO0255Q9UI72 69 aa2.74□□□□□ -1.97
LETMD1-233ENST00000552433 APOBP04114 4563 aaKnown RBP2.73□□□□□ -1.97
LETMD1-233ENST00000552433 A8MTW9 85 aa2.73□□□□□ -1.97
LETMD1-233ENST00000552433 APLNQ9ULZ1 77 aa2.73□□□□□ -1.97
LETMD1-233ENST00000552433 VPS13BQ7Z7G8 4022 aa2.71□□□□□ -1.98
LETMD1-233ENST00000552433 DEFB105AQ8NG35 78 aa2.71□□□□□ -1.98
LETMD1-233ENST00000552433 HMCN2Q8NDA2 5059 aa2.71□□□□□ -1.98
LETMD1-233ENST00000552433 LRP1BQ9NZR2 4599 aa2.7□□□□□ -1.98
LETMD1-233ENST00000552433 DEFB104AQ8WTQ1 72 aa2.69□□□□□ -1.98
LETMD1-233ENST00000552433 RNF213Q63HN8 5207 aa2.67□□□□□ -1.98
LETMD1-233ENST00000552433 PRLHP81277 87 aa2.67□□□□□ -1.98
LETMD1-233ENST00000552433 KLK9Q2XQG4 91 aa2.67□□□□□ -1.98
LETMD1-233ENST00000552433 DEFB135Q30KP9 77 aa2.66□□□□□ -1.98
LETMD1-233ENST00000552433 DNAH5Q8TE73 4624 aa2.64□□□□□ -1.99
LETMD1-233ENST00000552433 SPRR1BP22528 89 aa2.64□□□□□ -1.99
LETMD1-233ENST00000552433 S4R3F8 94 aa2.64□□□□□ -1.99
LETMD1-233ENST00000552433 PKHD1L1Q86WI1 4243 aa2.63□□□□□ -1.99
LETMD1-233ENST00000552433 NOP10Q9NPE3 64 aaKnown RBP2.63□□□□□ -1.99
LETMD1-233ENST00000552433 SMR3BP02814 79 aaPredicted RBP2.61□□□□□ -1.99
LETMD1-233ENST00000552433 MUC2Q02817 5179 aa2.61□□□□□ -1.99
LETMD1-233ENST00000552433 FAT1Q14517 4588 aa2.61□□□□□ -1.99
LETMD1-233ENST00000552433 FAT4Q6V0I7 4981 aa2.6□□□□□ -1.99
LETMD1-233ENST00000552433 LRP2P98164 4655 aa2.59□□□□□ -1.99
LETMD1-233ENST00000552433 DEFB4AO15263 64 aa2.59□□□□□ -1.99
LETMD1-233ENST00000552433 KRTAP12-1P59990 96 aa2.55□□□□□ -2
LETMD1-233ENST00000552433 LRP1Q07954 4544 aaKnown RBP2.54□□□□□ -2
LETMD1-233ENST00000552433 CRCT1Q9UGL9 99 aa2.54□□□□□ -2
LETMD1-233ENST00000552433 TNXBP22105 4242 aa2.53□□□□□ -2
LETMD1-233ENST00000552433 FAT3Q8TDW7 4589 aa2.51□□□□□ -2.01
LETMD1-233ENST00000552433 SPINK1P00995 79 aa2.51□□□□□ -2.01
LETMD1-233ENST00000552433 FSIP2Q5CZC0 6907 aa2.5□□□□□ -2.01
LETMD1-233ENST00000552433 HTN3P15516 51 aa2.5□□□□□ -2.01
LETMD1-233ENST00000552433 SPART-AS1P0CW21 52 aa2.47□□□□□ -2.01
LETMD1-233ENST00000552433 MT1HL1P0DM35 61 aa2.47□□□□□ -2.01
LETMD1-233ENST00000552433 APELAP0DMC3 54 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms