RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 FAT3Q8TDW7 4589 aa-0.4□□□□□ -2.47
USP44-207ENST00000552237 MAST1Q9Y2H9 1570 aa-0.4□□□□□ -2.47
USP44-207ENST00000552237 H0YGX0 51 aa-0.4□□□□□ -2.47
USP44-207ENST00000552237 SMIM5Q71RC9 77 aa-0.4□□□□□ -2.47
USP44-207ENST00000552237 KAAG1Q9UBP8 84 aa-0.4□□□□□ -2.47
USP44-207ENST00000552237 ABCA6Q8N139 1617 aa-0.4□□□□□ -2.47
USP44-207ENST00000552237 CCDC180Q9P1Z9 1646 aa-0.4□□□□□ -2.47
USP44-207ENST00000552237 GLI2P10070 1586 aa-0.4□□□□□ -2.47
USP44-207ENST00000552237 CELSR3Q9NYQ7 3312 aa-0.41□□□□□ -2.47
USP44-207ENST00000552237 EFCAB5A4FU69 1503 aa-0.41□□□□□ -2.48
USP44-207ENST00000552237 LINC00308Q8TCZ7 52 aa-0.41□□□□□ -2.48
USP44-207ENST00000552237 EEA1Q15075 1411 aa-0.41□□□□□ -2.48
USP44-207ENST00000552237 DNAH1Q9P2D7 4330 aa-0.41□□□□□ -2.48
USP44-207ENST00000552237 RYR1P21817 5038 aa-0.41□□□□□ -2.48
USP44-207ENST00000552237 DNAH11Q96DT5 4516 aa-0.41□□□□□ -2.48
USP44-207ENST00000552237 MUC17Q685J3 4493 aa-0.42□□□□□ -2.48
USP44-207ENST00000552237 KIAA1109Q2LD37 5005 aa-0.42□□□□□ -2.48
USP44-207ENST00000552237 ADGRG4Q8IZF6 3080 aa-0.42□□□□□ -2.48
USP44-207ENST00000552237 WFDC10BQ8IUB3 73 aa-0.42□□□□□ -2.48
USP44-207ENST00000552237 LAMA3Q16787 3333 aa-0.43□□□□□ -2.48
USP44-207ENST00000552237 CFAP46Q8IYW2 2715 aa-0.43□□□□□ -2.48
USP44-207ENST00000552237 CEP295Q9C0D2 2601 aa-0.43□□□□□ -2.48
USP44-207ENST00000552237 DEFB131AP59861 70 aa-0.43□□□□□ -2.48
USP44-207ENST00000552237 KRTAP8-1Q8IUC2 63 aa-0.43□□□□□ -2.48
USP44-207ENST00000552237 RNF213Q63HN8 5207 aa-0.43□□□□□ -2.48
USP44-207ENST00000552237 ABCA10Q8WWZ4 1543 aa-0.43□□□□□ -2.48
USP44-207ENST00000552237 A0A087WWC5 75 aa-0.44□□□□□ -2.48
USP44-207ENST00000552237 PLNP26678 52 aa-0.44□□□□□ -2.48
USP44-207ENST00000552237 KRTAP19-5Q3LI72 72 aa-0.44□□□□□ -2.48
USP44-207ENST00000552237 HYDINQ4G0P3 5121 aa-0.44□□□□□ -2.48
USP44-207ENST00000552237 CHD7Q9P2D1 2997 aa-0.44□□□□□ -2.48
USP44-207ENST00000552237 MROH2AA6NES4 1674 aa-0.44□□□□□ -2.48
USP44-207ENST00000552237 EFCAB6Q5THR3 1501 aa-0.44□□□□□ -2.48
USP44-207ENST00000552237 EPPK1P58107 5090 aaKnown RBP-0.44□□□□□ -2.48
USP44-207ENST00000552237 MT1HL1P0DM35 61 aa-0.45□□□□□ -2.48
USP44-207ENST00000552237 MT1XP80297 61 aa-0.45□□□□□ -2.48
USP44-207ENST00000552237 SMR3BP02814 79 aaPredicted RBP-0.46□□□□□ -2.48
USP44-207ENST00000552237 MGAQ8IWI9 3026 aa-0.47□□□□□ -2.48
USP44-207ENST00000552237 ITPR2Q14571 2701 aa-0.47□□□□□ -2.48
USP44-207ENST00000552237 MT1EP04732 61 aa-0.47□□□□□ -2.48
USP44-207ENST00000552237 KIF21BO75037 1637 aa-0.47□□□□□ -2.48
USP44-207ENST00000552237 DNAH2Q9P225 4427 aa-0.47□□□□□ -2.49
USP44-207ENST00000552237 TLN1Q9Y490 2541 aaKnown RBP-0.47□□□□□ -2.49
USP44-207ENST00000552237 CMYA5Q8N3K9 4069 aa-0.48□□□□□ -2.49
USP44-207ENST00000552237 CPS1P31327 1500 aa-0.48□□□□□ -2.49
USP44-207ENST00000552237 AGLP35573 1532 aa-0.48□□□□□ -2.49
USP44-207ENST00000552237 ABCA5Q8WWZ7 1642 aa-0.48□□□□□ -2.49
USP44-207ENST00000552237 SPTBN5Q9NRC6 3674 aaKnown RBP-0.48□□□□□ -2.49
USP44-207ENST00000552237 LMO7Q8WWI1 1683 aa-0.49□□□□□ -2.49
USP44-207ENST00000552237 IGIPA6NJ69 53 aa-0.49□□□□□ -2.49
USP44-207ENST00000552237 MT1LQ93083 61 aa-0.49□□□□□ -2.49
USP44-207ENST00000552237 PLECQ15149 4684 aaKnown RBP-0.49□□□□□ -2.49
USP44-207ENST00000552237 SACSQ9NZJ4 4579 aa-0.49□□□□□ -2.49
USP44-207ENST00000552237 RYR2Q92736 4967 aa-0.49□□□□□ -2.49
USP44-207ENST00000552237 DNAH8Q96JB1 4490 aa-0.5□□□□□ -2.49
USP44-207ENST00000552237 DDX60Q8IY21 1712 aaKnown RBP-0.5□□□□□ -2.49
USP44-207ENST00000552237 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.51□□□□□ -2.49
USP44-207ENST00000552237 APOBP04114 4563 aaKnown RBP-0.51□□□□□ -2.49
USP44-207ENST00000552237 EYSQ5T1H1 3165 aa-0.51□□□□□ -2.49
USP44-207ENST00000552237 SPENQ96T58 3664 aaKnown RBP-0.52□□□□□ -2.49
USP44-207ENST00000552237 POLR2KP53803 58 aaKnown RBP-0.52□□□□□ -2.49
USP44-207ENST00000552237 DEFB136Q30KP8 78 aa-0.52□□□□□ -2.49
USP44-207ENST00000552237 LEAP2Q969E1 77 aa-0.52□□□□□ -2.49
USP44-207ENST00000552237 PRXQ9BXM0 1461 aa-0.53□□□□□ -2.49
USP44-207ENST00000552237 BIRC6Q9NR09 4857 aa-0.53□□□□□ -2.49
USP44-207ENST00000552237 CLTCL1P53675 1640 aa-0.53□□□□□ -2.49
USP44-207ENST00000552237 SYCP2Q9BX26 1530 aa-0.54□□□□□ -2.5
USP44-207ENST00000552237 ABCA13Q86UQ4 5058 aa-0.54□□□□□ -2.5
USP44-207ENST00000552237 DNAH7Q8WXX0 4024 aa-0.54□□□□□ -2.5
USP44-207ENST00000552237 SMIM2Q9BVW6 85 aa-0.54□□□□□ -2.5
USP44-207ENST00000552237 ADCY10Q96PN6 1610 aa-0.54□□□□□ -2.5
USP44-207ENST00000552237 DMXL2Q8TDJ6 3036 aa-0.54□□□□□ -2.5
USP44-207ENST00000552237 DNHD1Q96M86 4753 aa-0.56□□□□□ -2.5
USP44-207ENST00000552237 CSMD1Q96PZ7 3565 aa-0.56□□□□□ -2.5
USP44-207ENST00000552237 SMIM31A0A1B0GVY4 71 aa-0.56□□□□□ -2.5
USP44-207ENST00000552237 DEFB4AO15263 64 aa-0.56□□□□□ -2.5
USP44-207ENST00000552237 CMC2Q9NRP2 79 aa-0.56□□□□□ -2.5
USP44-207ENST00000552237 TRPM2O94759 1503 aa-0.56□□□□□ -2.5
USP44-207ENST00000552237 FREM2Q5SZK8 3169 aa-0.56□□□□□ -2.5
USP44-207ENST00000552237 ATMQ13315 3056 aa-0.56□□□□□ -2.5
USP44-207ENST00000552237 ABCC8Q09428 1581 aa-0.57□□□□□ -2.5
USP44-207ENST00000552237 CSMD2Q7Z408 3487 aa-0.58□□□□□ -2.5
USP44-207ENST00000552237 MT2AP02795 61 aa-0.58□□□□□ -2.5
USP44-207ENST00000552237 KRTAP20-1Q3LI63 56 aa-0.58□□□□□ -2.5
USP44-207ENST00000552237 MT1MQ8N339 61 aa-0.58□□□□□ -2.5
USP44-207ENST00000552237 PRUNE2Q8WUY3 3088 aa-0.59□□□□□ -2.5
USP44-207ENST00000552237 RPS29P62273 56 aaKnown RBP-0.59□□□□□ -2.5
USP44-207ENST00000552237 TRRAPQ9Y4A5 3859 aa-0.59□□□□□ -2.5
USP44-207ENST00000552237 DYNC1H1Q14204 4646 aaKnown RBP-0.6□□□□□ -2.51
USP44-207ENST00000552237 TFF3Q07654 80 aa-0.6□□□□□ -2.51
USP44-207ENST00000552237 CFAP54Q96N23 3096 aa-0.6□□□□□ -2.51
USP44-207ENST00000552237 CRYBG3Q68DQ2 2970 aa-0.6□□□□□ -2.51
USP44-207ENST00000552237 MT1GP13640 62 aa-0.61□□□□□ -2.51
USP44-207ENST00000552237 DNAH17Q9UFH2 4485 aa-0.62□□□□□ -2.51
USP44-207ENST00000552237 NRXN3Q9Y4C0 1643 aa-0.62□□□□□ -2.51
USP44-207ENST00000552237 FANCD2Q9BXW9 1451 aa-0.62□□□□□ -2.51
USP44-207ENST00000552237 IQGAP1P46940 1657 aa-0.62□□□□□ -2.51
USP44-207ENST00000552237 CEP250Q9BV73 2442 aa-0.63□□□□□ -2.51
USP44-207ENST00000552237 BOD1L1Q8NFC6 3051 aa-0.63□□□□□ -2.51
USP44-207ENST00000552237 NDUFA1O15239 70 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms