RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 KRTAP10-5P60370 271 aa3.29□□□□□ -1.88
PPFIA2-226ENST00000552020 COA5Q86WW8 74 aa3.29□□□□□ -1.88
PPFIA2-226ENST00000552020 SRRM2Q9UQ35 2752 aaKnown RBP3.28□□□□□ -1.88
PPFIA2-226ENST00000552020 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
PPFIA2-226ENST00000552020 LRP1BQ9NZR2 4599 aa3.27□□□□□ -1.89
PPFIA2-226ENST00000552020 A0A1B0GU33 70 aa3.27□□□□□ -1.89
PPFIA2-226ENST00000552020 NUPR2A6NF83 97 aa3.27□□□□□ -1.89
PPFIA2-226ENST00000552020 DEFB105AQ8NG35 78 aa3.27□□□□□ -1.89
PPFIA2-226ENST00000552020 DNAH5Q8TE73 4624 aa3.26□□□□□ -1.89
PPFIA2-226ENST00000552020 DEFB135Q30KP9 77 aa3.26□□□□□ -1.89
PPFIA2-226ENST00000552020 IGFL1Q6UW32 110 aa3.26□□□□□ -1.89
PPFIA2-226ENST00000552020 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
PPFIA2-226ENST00000552020 HMCN2Q8NDA2 5059 aa3.25□□□□□ -1.89
PPFIA2-226ENST00000552020 SPTSSBQ8NFR3 76 aa3.25□□□□□ -1.89
PPFIA2-226ENST00000552020 LINC00472Q9H8W2 130 aa3.25□□□□□ -1.89
PPFIA2-226ENST00000552020 A0A087WSZ3 146 aa3.24□□□□□ -1.89
PPFIA2-226ENST00000552020 HRES1P13985 223 aa3.24□□□□□ -1.89
PPFIA2-226ENST00000552020 WFDC10BQ8IUB3 73 aa3.24□□□□□ -1.89
PPFIA2-226ENST00000552020 WFDC13Q8IUB5 93 aa3.24□□□□□ -1.89
PPFIA2-226ENST00000552020 MMP24-AS1A0A0U1RRL7 71 aa3.23□□□□□ -1.89
PPFIA2-226ENST00000552020 RTL8CO15255 209 aa3.23□□□□□ -1.89
PPFIA2-226ENST00000552020 HTN3P15516 51 aa3.22□□□□□ -1.89
PPFIA2-226ENST00000552020 RNF213Q63HN8 5207 aa3.22□□□□□ -1.89
PPFIA2-226ENST00000552020 VPS13BQ7Z7G8 4022 aa3.22□□□□□ -1.89
PPFIA2-226ENST00000552020 KRTAP13-2Q52LG2 175 aa3.21□□□□□ -1.9
PPFIA2-226ENST00000552020 FLG2Q5D862 2391 aaPredicted RBP3.2□□□□□ -1.9
PPFIA2-226ENST00000552020 IGKV2-24A0A0C4DH68 120 aa3.2□□□□□ -1.9
PPFIA2-226ENST00000552020 ACYP2P14621 99 aa3.2□□□□□ -1.9
PPFIA2-226ENST00000552020 FAT1Q14517 4588 aa3.19□□□□□ -1.9
PPFIA2-226ENST00000552020 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
PPFIA2-226ENST00000552020 LINC01554Q52M75 96 aa3.18□□□□□ -1.9
PPFIA2-226ENST00000552020 DEFB4AO15263 64 aa3.17□□□□□ -1.9
PPFIA2-226ENST00000552020 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
PPFIA2-226ENST00000552020 RETNLBQ9BQ08 111 aa3.17□□□□□ -1.9
PPFIA2-226ENST00000552020 MRPL34Q9BQ48 92 aaKnown RBP3.17□□□□□ -1.9
PPFIA2-226ENST00000552020 SPAG11AQ6PDA7 123 aa3.16□□□□□ -1.9
PPFIA2-226ENST00000552020 SPATA8Q6RVD6 105 aa3.16□□□□□ -1.9
PPFIA2-226ENST00000552020 DMAC1Q96GE9 116 aa3.16□□□□□ -1.9
PPFIA2-226ENST00000552020 UQCR11O14957 56 aa3.15□□□□□ -1.91
PPFIA2-226ENST00000552020 Q5VSD8 79 aa3.15□□□□□ -1.91
PPFIA2-226ENST00000552020 APLNQ9ULZ1 77 aa3.15□□□□□ -1.91
PPFIA2-226ENST00000552020 KRTAP12-2P59991 146 aa3.14□□□□□ -1.91
PPFIA2-226ENST00000552020 A0A1B0GU69 56 aa3.13□□□□□ -1.91
PPFIA2-226ENST00000552020 SPINK7P58062 85 aa3.13□□□□□ -1.91
PPFIA2-226ENST00000552020 KRTAP13-1Q8IUC0 172 aa3.13□□□□□ -1.91
PPFIA2-226ENST00000552020 Q96NJ1 140 aa3.13□□□□□ -1.91
PPFIA2-226ENST00000552020 A0A1W2PNN7 141 aa3.12□□□□□ -1.91
PPFIA2-226ENST00000552020 PRLHP81277 87 aa3.12□□□□□ -1.91
PPFIA2-226ENST00000552020 PCOTHQ58A44 107 aa3.12□□□□□ -1.91
PPFIA2-226ENST00000552020 A0A096LNI7 61 aa3.11□□□□□ -1.91
PPFIA2-226ENST00000552020 C1orf134Q5TEV5 83 aa3.11□□□□□ -1.91
PPFIA2-226ENST00000552020 LRP2P98164 4655 aa3.1□□□□□ -1.91
PPFIA2-226ENST00000552020 SMR3BP02814 79 aaPredicted RBP3.1□□□□□ -1.91
PPFIA2-226ENST00000552020 MIR22HGQ0VDD5 57 aa3.1□□□□□ -1.91
PPFIA2-226ENST00000552020 KRTAP13-3Q3SY46 172 aa3.1□□□□□ -1.91
PPFIA2-226ENST00000552020 FAT4Q6V0I7 4981 aa3.09□□□□□ -1.92
PPFIA2-226ENST00000552020 LRP1Q07954 4544 aaKnown RBP3.09□□□□□ -1.92
PPFIA2-226ENST00000552020 MUC2Q02817 5179 aa3.08□□□□□ -1.92
PPFIA2-226ENST00000552020 LINC00304Q8N9R0 145 aa3.08□□□□□ -1.92
PPFIA2-226ENST00000552020 FAT3Q8TDW7 4589 aa3.07□□□□□ -1.92
PPFIA2-226ENST00000552020 UBE2DNLQ8IWF7 75 aa3.07□□□□□ -1.92
PPFIA2-226ENST00000552020 SSBP3-AS1Q7Z2R9 100 aa3.06□□□□□ -1.92
PPFIA2-226ENST00000552020 PKHD1L1Q86WI1 4243 aa3.06□□□□□ -1.92
PPFIA2-226ENST00000552020 FSIP2Q5CZC0 6907 aa3.03□□□□□ -1.92
PPFIA2-226ENST00000552020 A0A0G2JQZ4 141 aa3.03□□□□□ -1.92
PPFIA2-226ENST00000552020 SPACA4Q8TDM5 124 aa3.03□□□□□ -1.92
PPFIA2-226ENST00000552020 C20orf166-AS1Q96NR2 134 aa3.02□□□□□ -1.93
PPFIA2-226ENST00000552020 PSORS1C2Q9UIG4 136 aa3.02□□□□□ -1.93
PPFIA2-226ENST00000552020 TNXBP22105 4242 aa2.99□□□□□ -1.93
PPFIA2-226ENST00000552020 NBDYA0A0U1RRE5 68 aa2.99□□□□□ -1.93
PPFIA2-226ENST00000552020 P0C880 135 aa2.98□□□□□ -1.93
PPFIA2-226ENST00000552020 KRTAP10-1P60331 282 aa2.98□□□□□ -1.93
PPFIA2-226ENST00000552020 CSAG1Q6PB30 78 aa2.98□□□□□ -1.93
PPFIA2-226ENST00000552020 CRCT1Q9UGL9 99 aa2.98□□□□□ -1.93
PPFIA2-226ENST00000552020 DNAH8Q96JB1 4490 aa2.96□□□□□ -1.94
PPFIA2-226ENST00000552020 ROMO1P60602 79 aa2.96□□□□□ -1.94
PPFIA2-226ENST00000552020 RPS29P62273 56 aaKnown RBP2.96□□□□□ -1.94
PPFIA2-226ENST00000552020 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
PPFIA2-226ENST00000552020 Q6ZRN7 208 aaPredicted RBP2.95□□□□□ -1.94
PPFIA2-226ENST00000552020 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
PPFIA2-226ENST00000552020 COX6B2Q6YFQ2 88 aa2.93□□□□□ -1.94
PPFIA2-226ENST00000552020 LPAP08519 4548 aa2.92□□□□□ -1.94
PPFIA2-226ENST00000552020 SPINK6Q6UWN8 80 aa2.92□□□□□ -1.94
PPFIA2-226ENST00000552020 PRO2289Q9P1D8 64 aa2.92□□□□□ -1.94
PPFIA2-226ENST00000552020 A0A087WTM6 91 aa2.91□□□□□ -1.94
PPFIA2-226ENST00000552020 SPINK1P00995 79 aa2.89□□□□□ -1.95
PPFIA2-226ENST00000552020 MT1HL1P0DM35 61 aa2.89□□□□□ -1.95
PPFIA2-226ENST00000552020 H1FX-AS1Q4G0G2 97 aa2.89□□□□□ -1.95
PPFIA2-226ENST00000552020 H0YAA0 97 aa2.87□□□□□ -1.95
PPFIA2-226ENST00000552020 KRTAP10-4P60372 401 aaPredicted RBP2.87□□□□□ -1.95
PPFIA2-226ENST00000552020 Q6ZSA8 131 aa2.87□□□□□ -1.95
PPFIA2-226ENST00000552020 KRTAP4-3Q9BYR4 195 aa2.86□□□□□ -1.95
PPFIA2-226ENST00000552020 TPRXLQ17RH7 258 aa2.83□□□□□ -1.96
PPFIA2-226ENST00000552020 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
PPFIA2-226ENST00000552020 RPL37P61927 97 aaKnown RBP2.81□□□□□ -1.96
PPFIA2-226ENST00000552020 KRTAP10-8P60410 259 aa2.79□□□□□ -1.96
PPFIA2-226ENST00000552020 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
PPFIA2-226ENST00000552020 CRIPTQ9P021 101 aa2.76□□□□□ -1.97
PPFIA2-226ENST00000552020 LCE3AQ5TA76 89 aa2.74□□□□□ -1.97
PPFIA2-226ENST00000552020 SYNE2Q8WXH0 6885 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms