RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 A0A1B0GV90 55 aa1.44□□□□□ -2.18
LIMA1-208ENST00000551691 ETDCA0A1B0GVM5 59 aa1.44□□□□□ -2.18
LIMA1-208ENST00000551691 DLEU1O43261 78 aa1.44□□□□□ -2.18
LIMA1-208ENST00000551691 APOC3P02656 99 aa1.44□□□□□ -2.18
LIMA1-208ENST00000551691 CCKP06307 115 aa1.44□□□□□ -2.18
LIMA1-208ENST00000551691 SPRR1AP35321 89 aa1.44□□□□□ -2.18
LIMA1-208ENST00000551691 PEA15Q15121 130 aa1.44□□□□□ -2.18
LIMA1-208ENST00000551691 KRTAP19-8Q3LI54 63 aa1.44□□□□□ -2.18
LIMA1-208ENST00000551691 MEIG1Q5JSS6 88 aa1.44□□□□□ -2.18
LIMA1-208ENST00000551691 PPP1R1CQ8WVI7 109 aa1.44□□□□□ -2.18
LIMA1-208ENST00000551691 CNFNQ9BYD5 112 aa1.44□□□□□ -2.18
LIMA1-208ENST00000551691 SMCO4Q9NRQ5 59 aa1.44□□□□□ -2.18
LIMA1-208ENST00000551691 MPC2O95563 127 aa1.43□□□□□ -2.18
LIMA1-208ENST00000551691 Q6ZQY7 126 aa1.43□□□□□ -2.18
LIMA1-208ENST00000551691 COX7B2Q8TF08 81 aa1.43□□□□□ -2.18
LIMA1-208ENST00000551691 SEC11CQ9BY50 192 aa1.43□□□□□ -2.18
LIMA1-208ENST00000551691 SERF2P84101 59 aa1.42□□□□□ -2.18
LIMA1-208ENST00000551691 TMEM141Q96I45 108 aa1.42□□□□□ -2.18
LIMA1-208ENST00000551691 KCNQ1DNQ9H478 68 aa1.42□□□□□ -2.18
LIMA1-208ENST00000551691 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
LIMA1-208ENST00000551691 TRBV10-3A0A0K0K1G6 114 aa1.41□□□□□ -2.18
LIMA1-208ENST00000551691 M0R143 59 aa1.41□□□□□ -2.18
LIMA1-208ENST00000551691 SPINK8P0C7L1 97 aa1.41□□□□□ -2.18
LIMA1-208ENST00000551691 SPANXDQ9BXN6 97 aa1.41□□□□□ -2.18
LIMA1-208ENST00000551691 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
LIMA1-208ENST00000551691 UMAD1C9J7I0 102 aa1.4□□□□□ -2.19
LIMA1-208ENST00000551691 IFI27P40305 119 aaPredicted RBP1.4□□□□□ -2.19
LIMA1-208ENST00000551691 AMELXQ99217 191 aa1.4□□□□□ -2.19
LIMA1-208ENST00000551691 C2orf88Q9BSF0 95 aa1.4□□□□□ -2.19
LIMA1-208ENST00000551691 LOC101927531A0A1B0GV80 90 aa1.39□□□□□ -2.19
LIMA1-208ENST00000551691 GNG4P50150 75 aa1.39□□□□□ -2.19
LIMA1-208ENST00000551691 Q5BKY6 102 aa1.39□□□□□ -2.19
LIMA1-208ENST00000551691 S100A7L2Q5SY68 101 aa1.39□□□□□ -2.19
LIMA1-208ENST00000551691 DEFB105AQ8NG35 78 aa1.39□□□□□ -2.19
LIMA1-208ENST00000551691 PRO1933Q9H354 126 aa1.39□□□□□ -2.19
LIMA1-208ENST00000551691 TEX49A0A1B0GTD5 131 aa1.38□□□□□ -2.19
LIMA1-208ENST00000551691 D6R8Y8 96 aa1.38□□□□□ -2.19
LIMA1-208ENST00000551691 COL5A1-AS1Q5SY13 56 aa1.38□□□□□ -2.19
LIMA1-208ENST00000551691 ALKAL2Q6UX46 152 aa1.38□□□□□ -2.19
LIMA1-208ENST00000551691 LINC00575Q6W349 94 aa1.38□□□□□ -2.19
LIMA1-208ENST00000551691 Q6ZRX8 168 aa1.38□□□□□ -2.19
LIMA1-208ENST00000551691 GTF2H5Q6ZYL4 71 aa1.38□□□□□ -2.19
LIMA1-208ENST00000551691 IFI27L1Q96BM0 104 aa1.38□□□□□ -2.19
LIMA1-208ENST00000551691 SMIM2Q9BVW6 85 aa1.38□□□□□ -2.19
LIMA1-208ENST00000551691 SPRR2GQ9BYE4 73 aa1.38□□□□□ -2.19
LIMA1-208ENST00000551691 A0A1B0GUT8 65 aa1.37□□□□□ -2.19
LIMA1-208ENST00000551691 IGIPA6NJ69 53 aa1.37□□□□□ -2.19
LIMA1-208ENST00000551691 LINC00587B1AMM8 73 aa1.37□□□□□ -2.19
LIMA1-208ENST00000551691 SPRR1BP22528 89 aa1.37□□□□□ -2.19
LIMA1-208ENST00000551691 LINC00158P58513 81 aa1.37□□□□□ -2.19
LIMA1-208ENST00000551691 RBM3P98179 157 aaKnown RBP1.37□□□□□ -2.19
LIMA1-208ENST00000551691 PMCHL1Q16048 86 aa1.37□□□□□ -2.19
LIMA1-208ENST00000551691 SPTSSBQ8NFR3 76 aa1.37□□□□□ -2.19
LIMA1-208ENST00000551691 C14orf144Q96I85 54 aa1.37□□□□□ -2.19
LIMA1-208ENST00000551691 C20orf78Q9BR46 151 aa1.37□□□□□ -2.19
LIMA1-208ENST00000551691 SERP1Q9Y6X1 66 aa1.37□□□□□ -2.19
LIMA1-208ENST00000551691 KRTAP12-4P60329 112 aa1.36□□□□□ -2.19
LIMA1-208ENST00000551691 ADIRFQ15847 76 aa1.36□□□□□ -2.19
LIMA1-208ENST00000551691 FAM213BQ8TBF2 198 aa1.36□□□□□ -2.19
LIMA1-208ENST00000551691 PMCHL2Q9BQD1 86 aa1.36□□□□□ -2.19
LIMA1-208ENST00000551691 GNG13Q9P2W3 67 aa1.36□□□□□ -2.19
LIMA1-208ENST00000551691 UQCR10Q9UDW1 63 aa1.36□□□□□ -2.19
LIMA1-208ENST00000551691 PPP1R17O96001 155 aa1.35□□□□□ -2.19
LIMA1-208ENST00000551691 SMIM13P0DJ93 91 aa1.35□□□□□ -2.19
LIMA1-208ENST00000551691 MT1XP80297 61 aa1.35□□□□□ -2.19
LIMA1-208ENST00000551691 MRPL54Q6P161 138 aaKnown RBP1.35□□□□□ -2.19
LIMA1-208ENST00000551691 VAMP8Q9BV40 100 aa1.35□□□□□ -2.19
LIMA1-208ENST00000551691 A0A1W2PPM0 123 aa1.34□□□□□ -2.19
LIMA1-208ENST00000551691 COX17Q14061 63 aa1.34□□□□□ -2.19
LIMA1-208ENST00000551691 BAGE3Q86Y29 109 aa1.34□□□□□ -2.19
LIMA1-208ENST00000551691 LINC00208Q96KT6 92 aa1.34□□□□□ -2.19
LIMA1-208ENST00000551691 MANBALQ9NQG1 85 aa1.34□□□□□ -2.19
LIMA1-208ENST00000551691 SPINK7P58062 85 aa1.33□□□□□ -2.2
LIMA1-208ENST00000551691 KRTDAPP60985 99 aa1.33□□□□□ -2.2
LIMA1-208ENST00000551691 SEC11AP67812 179 aa1.33□□□□□ -2.2
LIMA1-208ENST00000551691 PYY3Q5JQD4 70 aa1.33□□□□□ -2.2
LIMA1-208ENST00000551691 LINC01549A6NIU2 74 aa1.32□□□□□ -2.2
LIMA1-208ENST00000551691 NPC2P61916 151 aa1.31□□□□□ -2.2
LIMA1-208ENST00000551691 KLKP1Q107X0 134 aa1.31□□□□□ -2.2
LIMA1-208ENST00000551691 WFDC13Q8IUB5 93 aa1.31□□□□□ -2.2
LIMA1-208ENST00000551691 C20orf197Q8N268 126 aa1.31□□□□□ -2.2
LIMA1-208ENST00000551691 DSCR8Q96T75 97 aa1.31□□□□□ -2.2
LIMA1-208ENST00000551691 SNHG12Q9BXW3 62 aa1.31□□□□□ -2.2
LIMA1-208ENST00000551691 TRBV7-7A0A0K0K1E9 115 aa1.3□□□□□ -2.2
LIMA1-208ENST00000551691 H1FX-AS1Q4G0G2 97 aa1.3□□□□□ -2.2
LIMA1-208ENST00000551691 Q8N8P6 123 aa1.3□□□□□ -2.2
LIMA1-208ENST00000551691 V9GYV3 84 aa1.3□□□□□ -2.2
LIMA1-208ENST00000551691 LEPROTL1O95214 131 aa1.29□□□□□ -2.2
LIMA1-208ENST00000551691 ACYP1P07311 99 aa1.29□□□□□ -2.2
LIMA1-208ENST00000551691 IGLC3P0DOY3 106 aa1.29□□□□□ -2.2
LIMA1-208ENST00000551691 HSD52Q0P140 79 aa1.29□□□□□ -2.2
LIMA1-208ENST00000551691 TRAV13-2A0A0B4J235 113 aa1.28□□□□□ -2.2
LIMA1-208ENST00000551691 K7EMI3 77 aa1.28□□□□□ -2.2
LIMA1-208ENST00000551691 COX6CP09669 75 aa1.28□□□□□ -2.2
LIMA1-208ENST00000551691 KRTAP20-2Q3LI61 65 aa1.28□□□□□ -2.2
LIMA1-208ENST00000551691 K7EP34 96 aa1.27□□□□□ -2.21
LIMA1-208ENST00000551691 COX8AP10176 69 aa1.27□□□□□ -2.21
LIMA1-208ENST00000551691 IFITM1P13164 125 aa1.27□□□□□ -2.21
LIMA1-208ENST00000551691 C18orf32Q8TCD1 76 aa1.27□□□□□ -2.21
LIMA1-208ENST00000551691 NXT2Q9NPJ8 142 aaKnown RBP1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms