RNA–Protein interactions for RNA: ENST00000551483.5

CNOT2-231, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2 BASIC

Gene CNOT2, Length 4,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-231	ENST00000551483	NIPBL	Q6KC79	2804 aa	eCLIP	1.38	□□□□□ -2.19
CNOT2-231	ENST00000551483	LCE3D	Q9BYE3	92 aa		1.38	□□□□□ -2.19
CNOT2-231	ENST00000551483	ITPR2	Q14571	2701 aa		1.38	□□□□□ -2.19
CNOT2-231	ENST00000551483	ZAN	Q9Y493	2812 aa		1.37	□□□□□ -2.19
CNOT2-231	ENST00000551483	HIVEP1	P15822	2718 aa		1.37	□□□□□ -2.19
CNOT2-231	ENST00000551483	AKAP9	Q99996	3911 aa		1.36	□□□□□ -2.19
CNOT2-231	ENST00000551483	BRCA2	P51587	3418 aa		1.36	□□□□□ -2.19
CNOT2-231	ENST00000551483	MAST4	O15021	2626 aa		1.36	□□□□□ -2.19
CNOT2-231	ENST00000551483	KRTAP10-4	P60372	401 aa	Predicted RBP	1.36	□□□□□ -2.19
CNOT2-231	ENST00000551483	KRTAP5-11	Q6L8G4	156 aa		1.36	□□□□□ -2.19
CNOT2-231	ENST00000551483	LOC400499	M0QZD8	3231 aa		1.35	□□□□□ -2.19
CNOT2-231	ENST00000551483	FLNA	P21333	2647 aa	Known RBP	1.35	□□□□□ -2.19
CNOT2-231	ENST00000551483	TACC2	O95359	2948 aa		1.35	□□□□□ -2.19
CNOT2-231	ENST00000551483	ANKRD11	Q6UB99	2663 aa	Predicted RBP	1.35	□□□□□ -2.19
CNOT2-231	ENST00000551483	NOTCH1	P46531	2555 aa		1.35	□□□□□ -2.19
CNOT2-231	ENST00000551483	UNC79	Q9P2D8	2635 aa		1.35	□□□□□ -2.19
CNOT2-231	ENST00000551483	OBSCN	Q5VST9	7968 aa		1.34	□□□□□ -2.19
CNOT2-231	ENST00000551483	ADGRG4	Q8IZF6	3080 aa		1.34	□□□□□ -2.19
CNOT2-231	ENST00000551483	HRNR	Q86YZ3	2850 aa	Predicted RBP	1.34	□□□□□ -2.19
CNOT2-231	ENST00000551483	NBEAL1	Q6ZS30	2694 aa		1.34	□□□□□ -2.19
CNOT2-231	ENST00000551483	MXRA5	Q9NR99	2828 aa		1.34	□□□□□ -2.19
CNOT2-231	ENST00000551483	KRTAP12-3	P60328	96 aa		1.34	□□□□□ -2.19
CNOT2-231	ENST00000551483	FBN2	P35556	2912 aa		1.34	□□□□□ -2.2
CNOT2-231	ENST00000551483	TENM4	Q6N022	2769 aa		1.34	□□□□□ -2.2
CNOT2-231	ENST00000551483	VCAN	P13611	3396 aa		1.34	□□□□□ -2.2
CNOT2-231	ENST00000551483	SVEP1	Q4LDE5	3571 aa		1.33	□□□□□ -2.2
CNOT2-231	ENST00000551483	SMG1	Q96Q15	3661 aa	Known RBP	1.33	□□□□□ -2.2
CNOT2-231	ENST00000551483	MYCBP2	O75592	4640 aa		1.32	□□□□□ -2.2
CNOT2-231	ENST00000551483	NSD1	Q96L73	2696 aa	Predicted RBP	1.32	□□□□□ -2.2
CNOT2-231	ENST00000551483	IGSF10	Q6WRI0	2623 aa		1.32	□□□□□ -2.2
CNOT2-231	ENST00000551483	WDFY3	Q8IZQ1	3526 aa		1.32	□□□□□ -2.2
CNOT2-231	ENST00000551483	KRTAP4-4	Q9BYR3	166 aa		1.32	□□□□□ -2.2
CNOT2-231	ENST00000551483	CUBN	O60494	3623 aa		1.31	□□□□□ -2.2
CNOT2-231	ENST00000551483	PKD1L1	Q8TDX9	2849 aa		1.31	□□□□□ -2.2
CNOT2-231	ENST00000551483	DNAH8	Q96JB1	4490 aa		1.31	□□□□□ -2.2
CNOT2-231	ENST00000551483	RPS29	P62273	56 aa	Known RBP	1.3	□□□□□ -2.2
CNOT2-231	ENST00000551483	TENM3	Q9P273	2699 aa		1.3	□□□□□ -2.2
CNOT2-231	ENST00000551483	CEP295	Q9C0D2	2601 aa		1.29	□□□□□ -2.2
CNOT2-231	ENST00000551483	LYST	Q99698	3801 aa		1.29	□□□□□ -2.2
CNOT2-231	ENST00000551483	CSMD2	Q7Z408	3487 aa		1.29	□□□□□ -2.2
CNOT2-231	ENST00000551483	LCE3A	Q5TA76	89 aa		1.28	□□□□□ -2.2
CNOT2-231	ENST00000551483	FLNB	O75369	2602 aa	Known RBP	1.28	□□□□□ -2.2
CNOT2-231	ENST00000551483	DNAH14	Q0VDD8	3507 aa		1.27	□□□□□ -2.21
CNOT2-231	ENST00000551483	MGAM2	Q2M2H8	2515 aa		1.27	□□□□□ -2.21
CNOT2-231	ENST00000551483	KRTAP2-3	P0C7H8	128 aa		1.25	□□□□□ -2.21
CNOT2-231	ENST00000551483	KRTAP2-4	Q9BYR9	128 aa		1.25	□□□□□ -2.21
CNOT2-231	ENST00000551483	KRTAP2-1	Q9BYU5	128 aa		1.25	□□□□□ -2.21
CNOT2-231	ENST00000551483	MYO15A	Q9UKN7	3530 aa		1.24	□□□□□ -2.21
CNOT2-231	ENST00000551483	SMR3A	Q99954	134 aa		1.23	□□□□□ -2.21
CNOT2-231	ENST00000551483	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.23	□□□□□ -2.21
CNOT2-231	ENST00000551483	FRAS1	Q86XX4	4008 aa		1.23	□□□□□ -2.21
CNOT2-231	ENST00000551483	PRM1	P04553	51 aa		1.23	□□□□□ -2.21
CNOT2-231	ENST00000551483	KRTAP5-8	O75690	187 aa		1.22	□□□□□ -2.21
CNOT2-231	ENST00000551483	EYS	Q5T1H1	3165 aa		1.22	□□□□□ -2.21
CNOT2-231	ENST00000551483	DNAH10	Q8IVF4	4471 aa		1.22	□□□□□ -2.21
CNOT2-231	ENST00000551483	ANK2	Q01484	3957 aa		1.22	□□□□□ -2.21
CNOT2-231	ENST00000551483	KRTAP8-1	Q8IUC2	63 aa		1.22	□□□□□ -2.21
CNOT2-231	ENST00000551483	ZNF469	Q96JG9	3925 aa	Predicted RBP	1.22	□□□□□ -2.21
CNOT2-231	ENST00000551483	DNAH3	Q8TD57	4116 aa		1.21	□□□□□ -2.22
CNOT2-231	ENST00000551483	KMT2A	Q03164	3969 aa		1.2	□□□□□ -2.22
CNOT2-231	ENST00000551483	GPR98	Q8WXG9	6306 aa		1.2	□□□□□ -2.22
CNOT2-231	ENST00000551483	FBN3	Q75N90	2809 aa		1.2	□□□□□ -2.22
CNOT2-231	ENST00000551483	TRRAP	Q9Y4A5	3859 aa		1.19	□□□□□ -2.22
CNOT2-231	ENST00000551483	DNAH2	Q9P225	4427 aa		1.19	□□□□□ -2.22
CNOT2-231	ENST00000551483	CDH23	Q9H251	3354 aa		1.19	□□□□□ -2.22
CNOT2-231	ENST00000551483	APOB	P04114	4563 aa	Known RBP	1.19	□□□□□ -2.22
CNOT2-231	ENST00000551483	DNAH6	Q9C0G6	4158 aa		1.19	□□□□□ -2.22
CNOT2-231	ENST00000551483	DNAH9	Q9NYC9	4486 aa		1.18	□□□□□ -2.22
CNOT2-231	ENST00000551483	SACS	Q9NZJ4	4579 aa		1.16	□□□□□ -2.22
CNOT2-231	ENST00000551483	KRTAP5-1	Q6L8H4	278 aa		1.16	□□□□□ -2.22
CNOT2-231	ENST00000551483	VPS13B	Q7Z7G8	4022 aa		1.16	□□□□□ -2.22
CNOT2-231	ENST00000551483	DYNC2H1	Q8NCM8	4307 aa	Known RBP	1.16	□□□□□ -2.22
CNOT2-231	ENST00000551483	VPS13C	Q709C8	3753 aa		1.15	□□□□□ -2.22
CNOT2-231	ENST00000551483	TENM1	Q9UKZ4	2725 aa		1.15	□□□□□ -2.23
CNOT2-231	ENST00000551483	SMR3B	P02814	79 aa	Predicted RBP	1.15	□□□□□ -2.23
CNOT2-231	ENST00000551483	DNAH17	Q9UFH2	4485 aa		1.14	□□□□□ -2.23
CNOT2-231	ENST00000551483	FAT2	Q9NYQ8	4349 aa		1.13	□□□□□ -2.23
CNOT2-231	ENST00000551483	FAT3	Q8TDW7	4589 aa		1.12	□□□□□ -2.23
CNOT2-231	ENST00000551483	KRTAP9-6	A8MVA2	160 aa		1.12	□□□□□ -2.23
CNOT2-231	ENST00000551483	DNAH1	Q9P2D7	4330 aa		1.11	□□□□□ -2.23
CNOT2-231	ENST00000551483	PKHD1L1	Q86WI1	4243 aa		1.1	□□□□□ -2.23
CNOT2-231	ENST00000551483	TNXB	P22105	4242 aa		1.1	□□□□□ -2.23
CNOT2-231	ENST00000551483	ANK3	Q12955	4377 aa	Known RBP	1.09	□□□□□ -2.24
CNOT2-231	ENST00000551483	CMYA5	Q8N3K9	4069 aa		1.09	□□□□□ -2.24
CNOT2-231	ENST00000551483	KRTAP5-5	Q701N2	237 aa	Predicted RBP	1.09	□□□□□ -2.24
CNOT2-231	ENST00000551483	HUWE1	Q7Z6Z7	4374 aa	Known RBP	1.08	□□□□□ -2.24
CNOT2-231	ENST00000551483	PKD1	P98161	4303 aa		1.07	□□□□□ -2.24
CNOT2-231	ENST00000551483	DNAH7	Q8WXX0	4024 aa		1.07	□□□□□ -2.24
CNOT2-231	ENST00000551483	KRTAP21-3	Q3LHN1	58 aa		1.07	□□□□□ -2.24
CNOT2-231	ENST00000551483	SYNE1	Q8NF91	8797 aa	Known RBP	1.06	□□□□□ -2.24
CNOT2-231	ENST00000551483	PLEC	Q15149	4684 aa	Known RBP	1.06	□□□□□ -2.24
CNOT2-231	ENST00000551483	HECTD4	Q9Y4D8	3996 aa		1.06	□□□□□ -2.24
CNOT2-231	ENST00000551483	HSPG2	P98160	4391 aa		1.05	□□□□□ -2.24
CNOT2-231	ENST00000551483	MUC19	Q7Z5P9	8384 aa		1.02	□□□□□ -2.25
CNOT2-231	ENST00000551483	FLG	P20930	4061 aa	Predicted RBP	1.02	□□□□□ -2.25
CNOT2-231	ENST00000551483	FAT1	Q14517	4588 aa		1.02	□□□□□ -2.25
CNOT2-231	ENST00000551483	LCE1C	Q5T751	118 aa		1.01	□□□□□ -2.25
CNOT2-231	ENST00000551483	LCE1B	Q5T7P3	118 aa		1.01	□□□□□ -2.25
CNOT2-231	ENST00000551483	PRKDC	P78527	4128 aa	Known RBP	1.01	□□□□□ -2.25
CNOT2-231	ENST00000551483	KRTAP19-5	Q3LI72	72 aa		1.01	□□□□□ -2.25

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