RNA–Protein interactions for RNA: ENST00000549917.1

PPFIA2-217, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-217ENST00000549917 DNAH7Q8WXX0 4024 aa1.03□□□□□ -2.24
PPFIA2-217ENST00000549917 RELNP78509 3460 aa1.03□□□□□ -2.24
PPFIA2-217ENST00000549917 SONP18583 2426 aaKnown RBP1.03□□□□□ -2.24
PPFIA2-217ENST00000549917 TACC2O95359 2948 aa1.03□□□□□ -2.24
PPFIA2-217ENST00000549917 UNC79Q9P2D8 2635 aa1.02□□□□□ -2.25
PPFIA2-217ENST00000549917 SPRR2AP35326 72 aa1.02□□□□□ -2.25
PPFIA2-217ENST00000549917 DNAH2Q9P225 4427 aa1.02□□□□□ -2.25
PPFIA2-217ENST00000549917 NBEAL2Q6ZNJ1 2754 aa1.02□□□□□ -2.25
PPFIA2-217ENST00000549917 COL6A3P12111 3177 aa1.01□□□□□ -2.25
PPFIA2-217ENST00000549917 FLNBO75369 2602 aaKnown RBP1.01□□□□□ -2.25
PPFIA2-217ENST00000549917 DMXL2Q8TDJ6 3036 aa1□□□□□ -2.25
PPFIA2-217ENST00000549917 SPTBN5Q9NRC6 3674 aaKnown RBP1□□□□□ -2.25
PPFIA2-217ENST00000549917 ANKRD11Q6UB99 2663 aaPredicted RBP1□□□□□ -2.25
PPFIA2-217ENST00000549917 KRTAP19-5Q3LI72 72 aa1□□□□□ -2.25
PPFIA2-217ENST00000549917 ITPR1Q14643 2758 aa0.99□□□□□ -2.25
PPFIA2-217ENST00000549917 ATMQ13315 3056 aa0.99□□□□□ -2.25
PPFIA2-217ENST00000549917 HMCN1Q96RW7 5635 aa0.99□□□□□ -2.25
PPFIA2-217ENST00000549917 ZFYVE26Q68DK2 2539 aa0.98□□□□□ -2.25
PPFIA2-217ENST00000549917 DNAH10Q8IVF4 4471 aa0.98□□□□□ -2.25
PPFIA2-217ENST00000549917 TLN2Q9Y4G6 2542 aa0.98□□□□□ -2.25
PPFIA2-217ENST00000549917 SZT2Q5T011 3432 aa0.98□□□□□ -2.25
PPFIA2-217ENST00000549917 DMXL1Q9Y485 3027 aa0.97□□□□□ -2.25
PPFIA2-217ENST00000549917 HSPG2P98160 4391 aa0.97□□□□□ -2.25
PPFIA2-217ENST00000549917 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
PPFIA2-217ENST00000549917 HECTD4Q9Y4D8 3996 aa0.97□□□□□ -2.25
PPFIA2-217ENST00000549917 PKD1P98161 4303 aa0.96□□□□□ -2.26
PPFIA2-217ENST00000549917 NBEAQ8NFP9 2946 aa0.96□□□□□ -2.26
PPFIA2-217ENST00000549917 CSMD1Q96PZ7 3565 aa0.96□□□□□ -2.26
PPFIA2-217ENST00000549917 NIPBLQ6KC79 2804 aaeCLIP0.96□□□□□ -2.26
PPFIA2-217ENST00000549917 ZANQ9Y493 2812 aa0.96□□□□□ -2.26
PPFIA2-217ENST00000549917 SMG1Q96Q15 3661 aaKnown RBP0.96□□□□□ -2.26
PPFIA2-217ENST00000549917 HIVEP1P15822 2718 aa0.95□□□□□ -2.26
PPFIA2-217ENST00000549917 FLGP20930 4061 aaPredicted RBP0.95□□□□□ -2.26
PPFIA2-217ENST00000549917 PRUNE2Q8WUY3 3088 aa0.95□□□□□ -2.26
PPFIA2-217ENST00000549917 CFAP46Q8IYW2 2715 aa0.95□□□□□ -2.26
PPFIA2-217ENST00000549917 LRBAP50851 2863 aa0.95□□□□□ -2.26
PPFIA2-217ENST00000549917 USP9XQ93008 2570 aaPredicted RBP0.95□□□□□ -2.26
PPFIA2-217ENST00000549917 TRIOO75962 3097 aa0.95□□□□□ -2.26
PPFIA2-217ENST00000549917 CEP350Q5VT06 3117 aa0.94□□□□□ -2.26
PPFIA2-217ENST00000549917 MAP1AP78559 2803 aaPredicted RBP0.94□□□□□ -2.26
PPFIA2-217ENST00000549917 DNAH6Q9C0G6 4158 aa0.94□□□□□ -2.26
PPFIA2-217ENST00000549917 C5orf42Q9H799 3197 aa0.93□□□□□ -2.26
PPFIA2-217ENST00000549917 CMYA5Q8N3K9 4069 aa0.93□□□□□ -2.26
PPFIA2-217ENST00000549917 DNAH12Q6ZR08 3092 aa0.92□□□□□ -2.26
PPFIA2-217ENST00000549917 LRP1Q07954 4544 aaKnown RBP0.92□□□□□ -2.26
PPFIA2-217ENST00000549917 TEX15Q9BXT5 2789 aa0.91□□□□□ -2.26
PPFIA2-217ENST00000549917 SVEP1Q4LDE5 3571 aa0.91□□□□□ -2.26
PPFIA2-217ENST00000549917 MYO18BQ8IUG5 2567 aa0.91□□□□□ -2.26
PPFIA2-217ENST00000549917 TENM3Q9P273 2699 aa0.91□□□□□ -2.26
PPFIA2-217ENST00000549917 SYNE1Q8NF91 8797 aaKnown RBP0.91□□□□□ -2.26
PPFIA2-217ENST00000549917 LPAP08519 4548 aa0.91□□□□□ -2.26
PPFIA2-217ENST00000549917 HTTP42858 3142 aa0.91□□□□□ -2.26
PPFIA2-217ENST00000549917 DNAH1Q9P2D7 4330 aa0.9□□□□□ -2.27
PPFIA2-217ENST00000549917 LAMA3Q16787 3333 aa0.9□□□□□ -2.27
PPFIA2-217ENST00000549917 FAT3Q8TDW7 4589 aa0.9□□□□□ -2.27
PPFIA2-217ENST00000549917 KRTAP6-2Q3LI66 62 aa0.9□□□□□ -2.27
PPFIA2-217ENST00000549917 SPRR2FQ96RM1 72 aa0.9□□□□□ -2.27
PPFIA2-217ENST00000549917 DOPEY1Q5JWR5 2465 aa0.9□□□□□ -2.27
PPFIA2-217ENST00000549917 TGP01266 2768 aa0.9□□□□□ -2.27
PPFIA2-217ENST00000549917 DNAH9Q9NYC9 4486 aa0.89□□□□□ -2.27
PPFIA2-217ENST00000549917 FLNAP21333 2647 aaKnown RBP0.89□□□□□ -2.27
PPFIA2-217ENST00000549917 SPRR2EP22531 72 aa0.89□□□□□ -2.27
PPFIA2-217ENST00000549917 CENPEQ02224 2701 aa0.88□□□□□ -2.27
PPFIA2-217ENST00000549917 MKI67P46013 3256 aaKnown RBP0.88□□□□□ -2.27
PPFIA2-217ENST00000549917 PKHD1P08F94 4074 aa0.88□□□□□ -2.27
PPFIA2-217ENST00000549917 FREM2Q5SZK8 3169 aa0.88□□□□□ -2.27
PPFIA2-217ENST00000549917 TEP1Q99973 2627 aaKnown RBP0.87□□□□□ -2.27
PPFIA2-217ENST00000549917 FASNP49327 2511 aaKnown RBP0.87□□□□□ -2.27
PPFIA2-217ENST00000549917 DMDP11532 3685 aa0.87□□□□□ -2.27
PPFIA2-217ENST00000549917 HRNRQ86YZ3 2850 aaPredicted RBP0.87□□□□□ -2.27
PPFIA2-217ENST00000549917 BOD1L1Q8NFC6 3051 aa0.87□□□□□ -2.27
PPFIA2-217ENST00000549917 ITPR2Q14571 2701 aa0.87□□□□□ -2.27
PPFIA2-217ENST00000549917 PLECQ15149 4684 aaKnown RBP0.86□□□□□ -2.27
PPFIA2-217ENST00000549917 NBEAL1Q6ZS30 2694 aa0.86□□□□□ -2.27
PPFIA2-217ENST00000549917 APOBP04114 4563 aaKnown RBP0.85□□□□□ -2.27
PPFIA2-217ENST00000549917 MT1EP04732 61 aa0.85□□□□□ -2.27
PPFIA2-217ENST00000549917 HTN3P15516 51 aa0.85□□□□□ -2.27
PPFIA2-217ENST00000549917 MGAM2Q2M2H8 2515 aa0.85□□□□□ -2.27
PPFIA2-217ENST00000549917 XIRP2A4UGR9 3374 aa0.84□□□□□ -2.28
PPFIA2-217ENST00000549917 MXRA5Q9NR99 2828 aa0.83□□□□□ -2.28
PPFIA2-217ENST00000549917 MAST4O15021 2626 aa0.83□□□□□ -2.28
PPFIA2-217ENST00000549917 DCHS1Q96JQ0 3298 aa0.83□□□□□ -2.28
PPFIA2-217ENST00000549917 SPTAN1Q13813 2472 aaKnown RBP0.81□□□□□ -2.28
PPFIA2-217ENST00000549917 FAT1Q14517 4588 aa0.81□□□□□ -2.28
PPFIA2-217ENST00000549917 ADGRG4Q8IZF6 3080 aa0.81□□□□□ -2.28
PPFIA2-217ENST00000549917 TRRAPQ9Y4A5 3859 aa0.81□□□□□ -2.28
PPFIA2-217ENST00000549917 KALRNO60229 2985 aa0.81□□□□□ -2.28
PPFIA2-217ENST00000549917 MT1HP80294 61 aa0.8□□□□□ -2.28
PPFIA2-217ENST00000549917 CSMD2Q7Z408 3487 aa0.79□□□□□ -2.28
PPFIA2-217ENST00000549917 WDFY4Q6ZS81 3184 aa0.79□□□□□ -2.28
PPFIA2-217ENST00000549917 MT1LQ93083 61 aa0.79□□□□□ -2.28
PPFIA2-217ENST00000549917 CEP295Q9C0D2 2601 aa0.79□□□□□ -2.28
PPFIA2-217ENST00000549917 IGSF10Q6WRI0 2623 aa0.78□□□□□ -2.28
PPFIA2-217ENST00000549917 DNAH5Q8TE73 4624 aa0.78□□□□□ -2.28
PPFIA2-217ENST00000549917 MUC3AQ02505 3323 aa0.78□□□□□ -2.28
PPFIA2-217ENST00000549917 LRP1BQ9NZR2 4599 aa0.77□□□□□ -2.29
PPFIA2-217ENST00000549917 LOC400499M0QZD8 3231 aa0.77□□□□□ -2.29
PPFIA2-217ENST00000549917 DNAH17Q9UFH2 4485 aa0.76□□□□□ -2.29
PPFIA2-217ENST00000549917 VPS13CQ709C8 3753 aa0.76□□□□□ -2.29
PPFIA2-217ENST00000549917 LAMA1P25391 3075 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms