RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 CSMD2Q7Z408 3487 aa1.46□□□□□ -2.18
PRDM4-204ENST00000549416 DEFB1P60022 68 aa1.46□□□□□ -2.18
PRDM4-204ENST00000549416 TOMM7Q9P0U1 55 aa1.46□□□□□ -2.18
PRDM4-204ENST00000549416 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
PRDM4-204ENST00000549416 TLN2Q9Y4G6 2542 aa1.46□□□□□ -2.18
PRDM4-204ENST00000549416 MAP1AP78559 2803 aaPredicted RBP1.46□□□□□ -2.18
PRDM4-204ENST00000549416 MXRA5Q9NR99 2828 aa1.46□□□□□ -2.18
PRDM4-204ENST00000549416 WNK2Q9Y3S1 2297 aa1.46□□□□□ -2.18
PRDM4-204ENST00000549416 SETXQ7Z333 2677 aaKnown RBP1.45□□□□□ -2.18
PRDM4-204ENST00000549416 ZANQ9Y493 2812 aa1.45□□□□□ -2.18
PRDM4-204ENST00000549416 ATRQ13535 2644 aa1.45□□□□□ -2.18
PRDM4-204ENST00000549416 ACANP16112 2415 aa1.45□□□□□ -2.18
PRDM4-204ENST00000549416 A8MTW9 85 aa1.45□□□□□ -2.18
PRDM4-204ENST00000549416 M0QY20 66 aa1.45□□□□□ -2.18
PRDM4-204ENST00000549416 HIVEP1P15822 2718 aa1.44□□□□□ -2.18
PRDM4-204ENST00000549416 ITPR2Q14571 2701 aa1.44□□□□□ -2.18
PRDM4-204ENST00000549416 STAB1Q9NY15 2570 aa1.44□□□□□ -2.18
PRDM4-204ENST00000549416 PRLHP81277 87 aa1.44□□□□□ -2.18
PRDM4-204ENST00000549416 LINC01556Q5JQF7 62 aa1.44□□□□□ -2.18
PRDM4-204ENST00000549416 CLPSL2Q6UWE3 100 aa1.44□□□□□ -2.18
PRDM4-204ENST00000549416 FLG2Q5D862 2391 aaPredicted RBP1.44□□□□□ -2.18
PRDM4-204ENST00000549416 WNK1Q9H4A3 2382 aa1.43□□□□□ -2.18
PRDM4-204ENST00000549416 NBPF19A0A087WUL8 3843 aa1.43□□□□□ -2.18
PRDM4-204ENST00000549416 NSD1Q96L73 2696 aaPredicted RBP1.43□□□□□ -2.18
PRDM4-204ENST00000549416 SETD2Q9BYW2 2564 aaPredicted RBP1.42□□□□□ -2.18
PRDM4-204ENST00000549416 A0A0D9SG42 100 aa1.42□□□□□ -2.18
PRDM4-204ENST00000549416 DEFB104AQ8WTQ1 72 aa1.42□□□□□ -2.18
PRDM4-204ENST00000549416 S4R3F8 94 aa1.42□□□□□ -2.18
PRDM4-204ENST00000549416 PDZD2O15018 2839 aa1.42□□□□□ -2.18
PRDM4-204ENST00000549416 NIPBLQ6KC79 2804 aaeCLIP1.42□□□□□ -2.18
PRDM4-204ENST00000549416 COL6A5A8TX70 2615 aa1.41□□□□□ -2.18
PRDM4-204ENST00000549416 ANK2Q01484 3957 aa1.41□□□□□ -2.18
PRDM4-204ENST00000549416 TEP1Q99973 2627 aaKnown RBP1.41□□□□□ -2.18
PRDM4-204ENST00000549416 ALMS1Q8TCU4 4167 aa1.4□□□□□ -2.18
PRDM4-204ENST00000549416 CUBNO60494 3623 aa1.4□□□□□ -2.18
PRDM4-204ENST00000549416 NF1P21359 2839 aa1.4□□□□□ -2.19
PRDM4-204ENST00000549416 MGAM2Q2M2H8 2515 aa1.4□□□□□ -2.19
PRDM4-204ENST00000549416 HMCN1Q96RW7 5635 aa1.39□□□□□ -2.19
PRDM4-204ENST00000549416 ZNF469Q96JG9 3925 aaPredicted RBP1.39□□□□□ -2.19
PRDM4-204ENST00000549416 VWFP04275 2813 aa1.37□□□□□ -2.19
PRDM4-204ENST00000549416 TENM1Q9UKZ4 2725 aa1.37□□□□□ -2.19
PRDM4-204ENST00000549416 TRRAPQ9Y4A5 3859 aa1.37□□□□□ -2.19
PRDM4-204ENST00000549416 NBEAL1Q6ZS30 2694 aa1.36□□□□□ -2.19
PRDM4-204ENST00000549416 DNAH3Q8TD57 4116 aa1.35□□□□□ -2.19
PRDM4-204ENST00000549416 NBEAL2Q6ZNJ1 2754 aa1.35□□□□□ -2.19
PRDM4-204ENST00000549416 ANK3Q12955 4377 aaKnown RBP1.34□□□□□ -2.19
PRDM4-204ENST00000549416 NOTCH1P46531 2555 aa1.34□□□□□ -2.2
PRDM4-204ENST00000549416 A0A096LNI7 61 aa1.33□□□□□ -2.2
PRDM4-204ENST00000549416 CMYA5Q8N3K9 4069 aa1.32□□□□□ -2.2
PRDM4-204ENST00000549416 LYSTQ99698 3801 aa1.32□□□□□ -2.2
PRDM4-204ENST00000549416 SPINK1P00995 79 aa1.32□□□□□ -2.2
PRDM4-204ENST00000549416 MEGF8Q7Z7M0 2845 aa1.31□□□□□ -2.2
PRDM4-204ENST00000549416 SPINK6Q6UWN8 80 aa1.31□□□□□ -2.2
PRDM4-204ENST00000549416 PKD1L1Q8TDX9 2849 aa1.31□□□□□ -2.2
PRDM4-204ENST00000549416 SMR3BP02814 79 aaPredicted RBP1.3□□□□□ -2.2
PRDM4-204ENST00000549416 DNAH7Q8WXX0 4024 aa1.3□□□□□ -2.2
PRDM4-204ENST00000549416 TENM3Q9P273 2699 aa1.29□□□□□ -2.2
PRDM4-204ENST00000549416 DNAH1Q9P2D7 4330 aa1.29□□□□□ -2.2
PRDM4-204ENST00000549416 STAB2Q8WWQ8 2551 aa1.28□□□□□ -2.2
PRDM4-204ENST00000549416 COL7A1Q02388 2944 aa1.28□□□□□ -2.2
PRDM4-204ENST00000549416 CSMD3Q7Z407 3707 aa1.28□□□□□ -2.2
PRDM4-204ENST00000549416 PRKDCP78527 4128 aaKnown RBP1.28□□□□□ -2.21
PRDM4-204ENST00000549416 DYNC2H1Q8NCM8 4307 aaKnown RBP1.27□□□□□ -2.21
PRDM4-204ENST00000549416 HECTD4Q9Y4D8 3996 aa1.27□□□□□ -2.21
PRDM4-204ENST00000549416 KRTAP10-4P60372 401 aaPredicted RBP1.27□□□□□ -2.21
PRDM4-204ENST00000549416 STARD9Q9P2P6 4700 aa1.27□□□□□ -2.21
PRDM4-204ENST00000549416 DNHD1Q96M86 4753 aa1.25□□□□□ -2.21
PRDM4-204ENST00000549416 DNAH10Q8IVF4 4471 aa1.25□□□□□ -2.21
PRDM4-204ENST00000549416 DNAH6Q9C0G6 4158 aa1.25□□□□□ -2.21
PRDM4-204ENST00000549416 RPS29P62273 56 aaKnown RBP1.24□□□□□ -2.21
PRDM4-204ENST00000549416 HUWE1Q7Z6Z7 4374 aaKnown RBP1.24□□□□□ -2.21
PRDM4-204ENST00000549416 FRAS1Q86XX4 4008 aa1.24□□□□□ -2.21
PRDM4-204ENST00000549416 PLECQ15149 4684 aaKnown RBP1.24□□□□□ -2.21
PRDM4-204ENST00000549416 TENM2Q9NT68 2774 aa1.23□□□□□ -2.21
PRDM4-204ENST00000549416 DNAH9Q9NYC9 4486 aa1.23□□□□□ -2.21
PRDM4-204ENST00000549416 TGP01266 2768 aa1.22□□□□□ -2.21
PRDM4-204ENST00000549416 M0QZ58 72 aa1.22□□□□□ -2.21
PRDM4-204ENST00000549416 C9orf92A6NGG3 77 aa1.2□□□□□ -2.22
PRDM4-204ENST00000549416 VPS13DQ5THJ4 4388 aa1.2□□□□□ -2.22
PRDM4-204ENST00000549416 DNAH2Q9P225 4427 aa1.19□□□□□ -2.22
PRDM4-204ENST00000549416 SRRM2Q9UQ35 2752 aaKnown RBP1.19□□□□□ -2.22
PRDM4-204ENST00000549416 DNAH8Q96JB1 4490 aa1.18□□□□□ -2.22
PRDM4-204ENST00000549416 HYDINQ4G0P3 5121 aa1.18□□□□□ -2.22
PRDM4-204ENST00000549416 DNAH17Q9UFH2 4485 aa1.18□□□□□ -2.22
PRDM4-204ENST00000549416 DNAH5Q8TE73 4624 aa1.18□□□□□ -2.22
PRDM4-204ENST00000549416 RYR2Q92736 4967 aa1.17□□□□□ -2.22
PRDM4-204ENST00000549416 KMT2AQ03164 3969 aa1.17□□□□□ -2.22
PRDM4-204ENST00000549416 PKHD1P08F94 4074 aa1.17□□□□□ -2.22
PRDM4-204ENST00000549416 M0R2T5 61 aa1.16□□□□□ -2.22
PRDM4-204ENST00000549416 PKD1P98161 4303 aa1.16□□□□□ -2.22
PRDM4-204ENST00000549416 DNAH11Q96DT5 4516 aa1.15□□□□□ -2.22
PRDM4-204ENST00000549416 FAT2Q9NYQ8 4349 aa1.15□□□□□ -2.23
PRDM4-204ENST00000549416 SACSQ9NZJ4 4579 aa1.14□□□□□ -2.23
PRDM4-204ENST00000549416 VPS13BQ7Z7G8 4022 aa1.14□□□□□ -2.23
PRDM4-204ENST00000549416 PKHD1L1Q86WI1 4243 aa1.13□□□□□ -2.23
PRDM4-204ENST00000549416 APOBP04114 4563 aaKnown RBP1.13□□□□□ -2.23
PRDM4-204ENST00000549416 DMBT1Q9UGM3 2413 aaPredicted RBP1.13□□□□□ -2.23
PRDM4-204ENST00000549416 TNP1P09430 55 aa1.11□□□□□ -2.23
PRDM4-204ENST00000549416 MT1HL1P0DM35 61 aa1.11□□□□□ -2.23
PRDM4-204ENST00000549416 RYR1P21817 5038 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms