RNA–Protein interactions for RNA: ENST00000547519.1

HECTD4-205, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HECTD4, Length 1,655 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-205ENST00000547519 DEFB4AO15263 64 aa3.35□□□□□ -1.87
HECTD4-205ENST00000547519 TRRAPQ9Y4A5 3859 aa3.35□□□□□ -1.87
HECTD4-205ENST00000547519 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
HECTD4-205ENST00000547519 PRKDCP78527 4128 aaKnown RBP3.34□□□□□ -1.87
HECTD4-205ENST00000547519 NOTCH1P46531 2555 aa3.34□□□□□ -1.88
HECTD4-205ENST00000547519 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
HECTD4-205ENST00000547519 TGP01266 2768 aa3.33□□□□□ -1.88
HECTD4-205ENST00000547519 KRTAP12-1P59990 96 aa3.33□□□□□ -1.88
HECTD4-205ENST00000547519 CMYA5Q8N3K9 4069 aa3.32□□□□□ -1.88
HECTD4-205ENST00000547519 DEFB135Q30KP9 77 aa3.32□□□□□ -1.88
HECTD4-205ENST00000547519 PKD1L1Q8TDX9 2849 aa3.31□□□□□ -1.88
HECTD4-205ENST00000547519 PP632Q6XCG6 107 aa3.3□□□□□ -1.88
HECTD4-205ENST00000547519 VWFP04275 2813 aa3.29□□□□□ -1.88
HECTD4-205ENST00000547519 RYR3Q15413 4870 aa3.27□□□□□ -1.89
HECTD4-205ENST00000547519 KMT2CQ8NEZ4 4911 aaKnown RBP3.26□□□□□ -1.89
HECTD4-205ENST00000547519 DNAH9Q9NYC9 4486 aa3.26□□□□□ -1.89
HECTD4-205ENST00000547519 BIRC6Q9NR09 4857 aa3.26□□□□□ -1.89
HECTD4-205ENST00000547519 NBEAL2Q6ZNJ1 2754 aa3.23□□□□□ -1.89
HECTD4-205ENST00000547519 RYR2Q92736 4967 aa3.22□□□□□ -1.89
HECTD4-205ENST00000547519 DYNC2H1Q8NCM8 4307 aaKnown RBP3.22□□□□□ -1.89
HECTD4-205ENST00000547519 DNAH3Q8TD57 4116 aa3.21□□□□□ -1.9
HECTD4-205ENST00000547519 KRTAP1-5Q9BYS1 174 aa3.2□□□□□ -1.9
HECTD4-205ENST00000547519 TENM3Q9P273 2699 aa3.19□□□□□ -1.9
HECTD4-205ENST00000547519 M0QZ58 72 aa3.19□□□□□ -1.9
HECTD4-205ENST00000547519 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
HECTD4-205ENST00000547519 EPPK1P58107 5090 aaKnown RBP3.18□□□□□ -1.9
HECTD4-205ENST00000547519 HUWE1Q7Z6Z7 4374 aaKnown RBP3.18□□□□□ -1.9
HECTD4-205ENST00000547519 SACSQ9NZJ4 4579 aa3.18□□□□□ -1.9
HECTD4-205ENST00000547519 DNAH1Q9P2D7 4330 aa3.17□□□□□ -1.9
HECTD4-205ENST00000547519 MT3P25713 68 aa3.17□□□□□ -1.9
HECTD4-205ENST00000547519 VPS13DQ5THJ4 4388 aa3.15□□□□□ -1.91
HECTD4-205ENST00000547519 STAB2Q8WWQ8 2551 aa3.13□□□□□ -1.91
HECTD4-205ENST00000547519 PLECQ15149 4684 aaKnown RBP3.11□□□□□ -1.91
HECTD4-205ENST00000547519 Q5VSD8 79 aa3.11□□□□□ -1.91
HECTD4-205ENST00000547519 STARD9Q9P2P6 4700 aa3.1□□□□□ -1.91
HECTD4-205ENST00000547519 DNAH7Q8WXX0 4024 aa3.1□□□□□ -1.91
HECTD4-205ENST00000547519 HYDINQ4G0P3 5121 aa3.1□□□□□ -1.91
HECTD4-205ENST00000547519 HERC2O95714 4834 aa3.08□□□□□ -1.92
HECTD4-205ENST00000547519 COL7A1Q02388 2944 aa3.07□□□□□ -1.92
HECTD4-205ENST00000547519 A0A1B0GVY2 172 aa3.07□□□□□ -1.92
HECTD4-205ENST00000547519 KRTAP13-2Q52LG2 175 aa3.06□□□□□ -1.92
HECTD4-205ENST00000547519 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
HECTD4-205ENST00000547519 LYSTQ99698 3801 aa3.04□□□□□ -1.92
HECTD4-205ENST00000547519 RPS29P62273 56 aaKnown RBP3.04□□□□□ -1.92
HECTD4-205ENST00000547519 DNAH10Q8IVF4 4471 aa3.04□□□□□ -1.92
HECTD4-205ENST00000547519 PCLOQ9Y6V0 5065 aa3.03□□□□□ -1.92
HECTD4-205ENST00000547519 DMBT1Q9UGM3 2413 aaPredicted RBP3.01□□□□□ -1.93
HECTD4-205ENST00000547519 SRRM2Q9UQ35 2752 aaKnown RBP3.01□□□□□ -1.93
HECTD4-205ENST00000547519 DNAH11Q96DT5 4516 aa3□□□□□ -1.93
HECTD4-205ENST00000547519 KIAA1109Q2LD37 5005 aa3□□□□□ -1.93
HECTD4-205ENST00000547519 CSMD3Q7Z407 3707 aa2.99□□□□□ -1.93
HECTD4-205ENST00000547519 DYNC1H1Q14204 4646 aaKnown RBP2.99□□□□□ -1.93
HECTD4-205ENST00000547519 DNAH6Q9C0G6 4158 aa2.97□□□□□ -1.93
HECTD4-205ENST00000547519 RYR1P21817 5038 aa2.96□□□□□ -1.94
HECTD4-205ENST00000547519 KMT2AQ03164 3969 aa2.96□□□□□ -1.94
HECTD4-205ENST00000547519 ABCA13Q86UQ4 5058 aa2.95□□□□□ -1.94
HECTD4-205ENST00000547519 FRAS1Q86XX4 4008 aa2.95□□□□□ -1.94
HECTD4-205ENST00000547519 HECTD4Q9Y4D8 3996 aa2.95□□□□□ -1.94
HECTD4-205ENST00000547519 DNAH17Q9UFH2 4485 aa2.94□□□□□ -1.94
HECTD4-205ENST00000547519 MYCBP2O75592 4640 aa2.92□□□□□ -1.94
HECTD4-205ENST00000547519 FAT2Q9NYQ8 4349 aa2.92□□□□□ -1.94
HECTD4-205ENST00000547519 DNAH2Q9P225 4427 aa2.91□□□□□ -1.94
HECTD4-205ENST00000547519 DNAH8Q96JB1 4490 aa2.91□□□□□ -1.94
HECTD4-205ENST00000547519 KRTAP1-4P0C5Y4 121 aa2.91□□□□□ -1.94
HECTD4-205ENST00000547519 SMR3BP02814 79 aaPredicted RBP2.88□□□□□ -1.95
HECTD4-205ENST00000547519 DNAH5Q8TE73 4624 aa2.88□□□□□ -1.95
HECTD4-205ENST00000547519 LRP1BQ9NZR2 4599 aa2.88□□□□□ -1.95
HECTD4-205ENST00000547519 HSPG2P98160 4391 aa2.88□□□□□ -1.95
HECTD4-205ENST00000547519 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
HECTD4-205ENST00000547519 KRTAP10-10P60014 251 aa2.86□□□□□ -1.95
HECTD4-205ENST00000547519 PKHD1P08F94 4074 aa2.86□□□□□ -1.95
HECTD4-205ENST00000547519 KRTAP10-1P60331 282 aa2.85□□□□□ -1.95
HECTD4-205ENST00000547519 APOBP04114 4563 aaKnown RBP2.85□□□□□ -1.95
HECTD4-205ENST00000547519 PKD1P98161 4303 aa2.85□□□□□ -1.95
HECTD4-205ENST00000547519 C9orf92A6NGG3 77 aa2.84□□□□□ -1.95
HECTD4-205ENST00000547519 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
HECTD4-205ENST00000547519 TNP1P09430 55 aa2.82□□□□□ -1.96
HECTD4-205ENST00000547519 HERC1Q15751 4861 aa2.81□□□□□ -1.96
HECTD4-205ENST00000547519 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
HECTD4-205ENST00000547519 FAT1Q14517 4588 aa2.79□□□□□ -1.96
HECTD4-205ENST00000547519 KRTAP10-12P60413 245 aa2.75□□□□□ -1.97
HECTD4-205ENST00000547519 VPS13BQ7Z7G8 4022 aa2.74□□□□□ -1.97
HECTD4-205ENST00000547519 HMCN2Q8NDA2 5059 aa2.72□□□□□ -1.97
HECTD4-205ENST00000547519 UBR4Q5T4S7 5183 aa2.72□□□□□ -1.97
HECTD4-205ENST00000547519 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
HECTD4-205ENST00000547519 KRTAP10-4P60372 401 aaPredicted RBP2.68□□□□□ -1.98
HECTD4-205ENST00000547519 KRTAP10-7P60409 375 aaPredicted RBP2.67□□□□□ -1.98
HECTD4-205ENST00000547519 FAT3Q8TDW7 4589 aa2.67□□□□□ -1.98
HECTD4-205ENST00000547519 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
HECTD4-205ENST00000547519 LCE3CQ5T5A8 94 aa2.66□□□□□ -1.98
HECTD4-205ENST00000547519 MT1HL1P0DM35 61 aa2.65□□□□□ -1.99
HECTD4-205ENST00000547519 LRP1Q07954 4544 aaKnown RBP2.64□□□□□ -1.99
HECTD4-205ENST00000547519 RNF213Q63HN8 5207 aa2.63□□□□□ -1.99
HECTD4-205ENST00000547519 PKHD1L1Q86WI1 4243 aa2.63□□□□□ -1.99
HECTD4-205ENST00000547519 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
HECTD4-205ENST00000547519 KRTAP10-5P60370 271 aa2.61□□□□□ -1.99
HECTD4-205ENST00000547519 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
HECTD4-205ENST00000547519 KRTAP8-1Q8IUC2 63 aa2.57□□□□□ -2
HECTD4-205ENST00000547519 TNXBP22105 4242 aa2.57□□□□□ -2
HECTD4-205ENST00000547519 LRP2P98164 4655 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms