RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 TEP1Q99973 2627 aaKnown RBP1.71□□□□□ -2.14
CPNE8-204ENST00000546603 HECTD1Q9ULT8 2610 aa1.71□□□□□ -2.14
CPNE8-204ENST00000546603 FBN2P35556 2912 aa1.71□□□□□ -2.14
CPNE8-204ENST00000546603 HIVEP1P15822 2718 aa1.71□□□□□ -2.14
CPNE8-204ENST00000546603 IGSF10Q6WRI0 2623 aa1.7□□□□□ -2.14
CPNE8-204ENST00000546603 A0A0D9SG42 100 aa1.7□□□□□ -2.14
CPNE8-204ENST00000546603 ACANP16112 2415 aa1.7□□□□□ -2.14
CPNE8-204ENST00000546603 ZFHX4Q86UP3 3567 aa1.7□□□□□ -2.14
CPNE8-204ENST00000546603 SMG1Q96Q15 3661 aaKnown RBP1.7□□□□□ -2.14
CPNE8-204ENST00000546603 FASNP49327 2511 aaKnown RBP1.69□□□□□ -2.14
CPNE8-204ENST00000546603 ATRQ13535 2644 aa1.69□□□□□ -2.14
CPNE8-204ENST00000546603 UBR5O95071 2799 aaPredicted RBP1.68□□□□□ -2.14
CPNE8-204ENST00000546603 Q6ZRN7 208 aaPredicted RBP1.68□□□□□ -2.14
CPNE8-204ENST00000546603 NIPBLQ6KC79 2804 aaeCLIP1.67□□□□□ -2.14
CPNE8-204ENST00000546603 MAST4O15021 2626 aa1.67□□□□□ -2.14
CPNE8-204ENST00000546603 S4R3F8 94 aa1.66□□□□□ -2.14
CPNE8-204ENST00000546603 ASPMQ8IZT6 3477 aa1.66□□□□□ -2.14
CPNE8-204ENST00000546603 FLNBO75369 2602 aaKnown RBP1.66□□□□□ -2.14
CPNE8-204ENST00000546603 NBEAL1Q6ZS30 2694 aa1.65□□□□□ -2.14
CPNE8-204ENST00000546603 VWFP04275 2813 aa1.65□□□□□ -2.14
CPNE8-204ENST00000546603 ITPR2Q14571 2701 aa1.65□□□□□ -2.15
CPNE8-204ENST00000546603 C9orf92A6NGG3 77 aa1.65□□□□□ -2.15
CPNE8-204ENST00000546603 M0QZ58 72 aa1.65□□□□□ -2.15
CPNE8-204ENST00000546603 PLAC4Q8WY50 150 aa1.65□□□□□ -2.15
CPNE8-204ENST00000546603 SRRM2Q9UQ35 2752 aaKnown RBP1.64□□□□□ -2.15
CPNE8-204ENST00000546603 OTOGQ6ZRI0 2925 aa1.63□□□□□ -2.15
CPNE8-204ENST00000546603 TENM4Q6N022 2769 aa1.63□□□□□ -2.15
CPNE8-204ENST00000546603 SPENQ96T58 3664 aaKnown RBP1.63□□□□□ -2.15
CPNE8-204ENST00000546603 FLG2Q5D862 2391 aaPredicted RBP1.63□□□□□ -2.15
CPNE8-204ENST00000546603 TGP01266 2768 aa1.63□□□□□ -2.15
CPNE8-204ENST00000546603 TENM3Q9P273 2699 aa1.63□□□□□ -2.15
CPNE8-204ENST00000546603 USP24Q9UPU5 2620 aa1.62□□□□□ -2.15
CPNE8-204ENST00000546603 C10orf95Q9H7T3 257 aa1.62□□□□□ -2.15
CPNE8-204ENST00000546603 NSD1Q96L73 2696 aaPredicted RBP1.62□□□□□ -2.15
CPNE8-204ENST00000546603 PKD1L1Q8TDX9 2849 aa1.62□□□□□ -2.15
CPNE8-204ENST00000546603 COL6A5A8TX70 2615 aa1.61□□□□□ -2.15
CPNE8-204ENST00000546603 RELNP78509 3460 aa1.61□□□□□ -2.15
CPNE8-204ENST00000546603 ALMS1Q8TCU4 4167 aa1.6□□□□□ -2.15
CPNE8-204ENST00000546603 PDZD2O15018 2839 aa1.6□□□□□ -2.15
CPNE8-204ENST00000546603 NOTCH1P46531 2555 aa1.59□□□□□ -2.15
CPNE8-204ENST00000546603 LAMA5O15230 3695 aa1.59□□□□□ -2.15
CPNE8-204ENST00000546603 SVEP1Q4LDE5 3571 aa1.59□□□□□ -2.15
CPNE8-204ENST00000546603 INE1O15225 51 aa1.58□□□□□ -2.16
CPNE8-204ENST00000546603 MUC3AQ02505 3323 aa1.57□□□□□ -2.16
CPNE8-204ENST00000546603 MGAM2Q2M2H8 2515 aa1.57□□□□□ -2.16
CPNE8-204ENST00000546603 STAB2Q8WWQ8 2551 aa1.57□□□□□ -2.16
CPNE8-204ENST00000546603 MEGF8Q7Z7M0 2845 aa1.57□□□□□ -2.16
CPNE8-204ENST00000546603 BSNQ9UPA5 3926 aa1.56□□□□□ -2.16
CPNE8-204ENST00000546603 STAB1Q9NY15 2570 aa1.55□□□□□ -2.16
CPNE8-204ENST00000546603 CSMD2Q7Z408 3487 aa1.54□□□□□ -2.16
CPNE8-204ENST00000546603 DMBT1Q9UGM3 2413 aaPredicted RBP1.52□□□□□ -2.17
CPNE8-204ENST00000546603 SMR3BP02814 79 aaPredicted RBP1.51□□□□□ -2.17
CPNE8-204ENST00000546603 VPS13CQ709C8 3753 aa1.49□□□□□ -2.17
CPNE8-204ENST00000546603 NBPF19A0A087WUL8 3843 aa1.49□□□□□ -2.17
CPNE8-204ENST00000546603 TNP1P09430 55 aa1.49□□□□□ -2.17
CPNE8-204ENST00000546603 COL7A1Q02388 2944 aa1.48□□□□□ -2.17
CPNE8-204ENST00000546603 AKAP9Q99996 3911 aa1.48□□□□□ -2.17
CPNE8-204ENST00000546603 CUBNO60494 3623 aa1.46□□□□□ -2.18
CPNE8-204ENST00000546603 Q5VSD8 79 aa1.43□□□□□ -2.18
CPNE8-204ENST00000546603 KRTAP10-4P60372 401 aaPredicted RBP1.39□□□□□ -2.19
CPNE8-204ENST00000546603 ANK3Q12955 4377 aaKnown RBP1.38□□□□□ -2.19
CPNE8-204ENST00000546603 ZNF469Q96JG9 3925 aaPredicted RBP1.38□□□□□ -2.19
CPNE8-204ENST00000546603 TRRAPQ9Y4A5 3859 aa1.36□□□□□ -2.19
CPNE8-204ENST00000546603 CSMD3Q7Z407 3707 aa1.35□□□□□ -2.19
CPNE8-204ENST00000546603 DNAH3Q8TD57 4116 aa1.33□□□□□ -2.2
CPNE8-204ENST00000546603 DNAH1Q9P2D7 4330 aa1.33□□□□□ -2.2
CPNE8-204ENST00000546603 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
CPNE8-204ENST00000546603 LYSTQ99698 3801 aa1.31□□□□□ -2.2
CPNE8-204ENST00000546603 ANK2Q01484 3957 aa1.3□□□□□ -2.2
CPNE8-204ENST00000546603 HUWE1Q7Z6Z7 4374 aaKnown RBP1.29□□□□□ -2.2
CPNE8-204ENST00000546603 CMYA5Q8N3K9 4069 aa1.29□□□□□ -2.2
CPNE8-204ENST00000546603 M0R2T5 61 aa1.28□□□□□ -2.2
CPNE8-204ENST00000546603 MT1HL1P0DM35 61 aa1.28□□□□□ -2.2
CPNE8-204ENST00000546603 HECTD4Q9Y4D8 3996 aa1.28□□□□□ -2.2
CPNE8-204ENST00000546603 DNAH10Q8IVF4 4471 aa1.28□□□□□ -2.2
CPNE8-204ENST00000546603 DNAH8Q96JB1 4490 aa1.27□□□□□ -2.21
CPNE8-204ENST00000546603 FRAS1Q86XX4 4008 aa1.26□□□□□ -2.21
CPNE8-204ENST00000546603 DNAH9Q9NYC9 4486 aa1.26□□□□□ -2.21
CPNE8-204ENST00000546603 DNAH7Q8WXX0 4024 aa1.25□□□□□ -2.21
CPNE8-204ENST00000546603 KRTAP8-1Q8IUC2 63 aa1.25□□□□□ -2.21
CPNE8-204ENST00000546603 DYNC2H1Q8NCM8 4307 aaKnown RBP1.25□□□□□ -2.21
CPNE8-204ENST00000546603 DNAH6Q9C0G6 4158 aa1.25□□□□□ -2.21
CPNE8-204ENST00000546603 KMT2AQ03164 3969 aa1.24□□□□□ -2.21
CPNE8-204ENST00000546603 VPS13DQ5THJ4 4388 aa1.24□□□□□ -2.21
CPNE8-204ENST00000546603 PRKDCP78527 4128 aaKnown RBP1.23□□□□□ -2.21
CPNE8-204ENST00000546603 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
CPNE8-204ENST00000546603 DNAH17Q9UFH2 4485 aa1.23□□□□□ -2.21
CPNE8-204ENST00000546603 SPRR2GQ9BYE4 73 aa1.22□□□□□ -2.21
CPNE8-204ENST00000546603 DNAH11Q96DT5 4516 aa1.21□□□□□ -2.22
CPNE8-204ENST00000546603 DNAH2Q9P225 4427 aa1.21□□□□□ -2.22
CPNE8-204ENST00000546603 VPS13BQ7Z7G8 4022 aa1.18□□□□□ -2.22
CPNE8-204ENST00000546603 STARD9Q9P2P6 4700 aa1.18□□□□□ -2.22
CPNE8-204ENST00000546603 PKD1P98161 4303 aa1.18□□□□□ -2.22
CPNE8-204ENST00000546603 PKHD1P08F94 4074 aa1.17□□□□□ -2.22
CPNE8-204ENST00000546603 PLECQ15149 4684 aaKnown RBP1.17□□□□□ -2.22
CPNE8-204ENST00000546603 LRP1BQ9NZR2 4599 aa1.15□□□□□ -2.22
CPNE8-204ENST00000546603 PKHD1L1Q86WI1 4243 aa1.14□□□□□ -2.23
CPNE8-204ENST00000546603 KRTAP19-2Q3LHN2 52 aa1.14□□□□□ -2.23
CPNE8-204ENST00000546603 GPR98Q8WXG9 6306 aa1.14□□□□□ -2.23
CPNE8-204ENST00000546603 KRTAP19-8Q3LI54 63 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms