RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 DNHD1Q96M86 4753 aa4.89□□□□□ -1.63
SOD2-216ENST00000546260 PLECQ15149 4684 aaKnown RBP4.89□□□□□ -1.63
SOD2-216ENST00000546260 PRO2289Q9P1D8 64 aa4.87□□□□□ -1.63
SOD2-216ENST00000546260 DNAH11Q96DT5 4516 aa4.86□□□□□ -1.63
SOD2-216ENST00000546260 DNAH2Q9P225 4427 aa4.83□□□□□ -1.64
SOD2-216ENST00000546260 M0R2T5 61 aa4.8□□□□□ -1.64
SOD2-216ENST00000546260 DNAH7Q8WXX0 4024 aa4.8□□□□□ -1.64
SOD2-216ENST00000546260 DNAH3Q8TD57 4116 aa4.79□□□□□ -1.64
SOD2-216ENST00000546260 LRP1BQ9NZR2 4599 aa4.78□□□□□ -1.64
SOD2-216ENST00000546260 PRKDCP78527 4128 aaKnown RBP4.76□□□□□ -1.65
SOD2-216ENST00000546260 HECTD4Q9Y4D8 3996 aa4.73□□□□□ -1.65
SOD2-216ENST00000546260 INE1O15225 51 aa4.7□□□□□ -1.66
SOD2-216ENST00000546260 VPS13DQ5THJ4 4388 aa4.7□□□□□ -1.66
SOD2-216ENST00000546260 KMT2AQ03164 3969 aa4.69□□□□□ -1.66
SOD2-216ENST00000546260 LORP23490 312 aaPredicted RBP4.68□□□□□ -1.66
SOD2-216ENST00000546260 DNAH6Q9C0G6 4158 aa4.67□□□□□ -1.66
SOD2-216ENST00000546260 STARD9Q9P2P6 4700 aa4.66□□□□□ -1.66
SOD2-216ENST00000546260 A0A1B0GVY2 172 aa4.65□□□□□ -1.66
SOD2-216ENST00000546260 VPS13BQ7Z7G8 4022 aa4.63□□□□□ -1.67
SOD2-216ENST00000546260 MYCBP2O75592 4640 aa4.6□□□□□ -1.67
SOD2-216ENST00000546260 APOBP04114 4563 aaKnown RBP4.58□□□□□ -1.68
SOD2-216ENST00000546260 FAT1Q14517 4588 aa4.57□□□□□ -1.68
SOD2-216ENST00000546260 DNAH5Q8TE73 4624 aa4.56□□□□□ -1.68
SOD2-216ENST00000546260 KRTAP10-4P60372 401 aaPredicted RBP4.51□□□□□ -1.69
SOD2-216ENST00000546260 DYNC2H1Q8NCM8 4307 aaKnown RBP4.5□□□□□ -1.69
SOD2-216ENST00000546260 HYDINQ4G0P3 5121 aa4.47□□□□□ -1.69
SOD2-216ENST00000546260 KRTAP4-5Q9BYR2 181 aa4.45□□□□□ -1.7
SOD2-216ENST00000546260 SACSQ9NZJ4 4579 aa4.45□□□□□ -1.7
SOD2-216ENST00000546260 DYNC1H1Q14204 4646 aaKnown RBP4.45□□□□□ -1.7
SOD2-216ENST00000546260 LRP1Q07954 4544 aaKnown RBP4.43□□□□□ -1.7
SOD2-216ENST00000546260 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
SOD2-216ENST00000546260 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
SOD2-216ENST00000546260 KMT2CQ8NEZ4 4911 aaKnown RBP4.38□□□□□ -1.71
SOD2-216ENST00000546260 MT1HL1P0DM35 61 aa4.37□□□□□ -1.71
SOD2-216ENST00000546260 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
SOD2-216ENST00000546260 RYR1P21817 5038 aa4.37□□□□□ -1.71
SOD2-216ENST00000546260 HSPG2P98160 4391 aa4.37□□□□□ -1.71
SOD2-216ENST00000546260 KIAA1109Q2LD37 5005 aa4.37□□□□□ -1.71
SOD2-216ENST00000546260 FAT2Q9NYQ8 4349 aa4.36□□□□□ -1.71
SOD2-216ENST00000546260 FAT3Q8TDW7 4589 aa4.34□□□□□ -1.71
SOD2-216ENST00000546260 PKHD1P08F94 4074 aa4.33□□□□□ -1.72
SOD2-216ENST00000546260 KRTAP10-10P60014 251 aa4.27□□□□□ -1.73
SOD2-216ENST00000546260 PKD1P98161 4303 aa4.27□□□□□ -1.73
SOD2-216ENST00000546260 RYR3Q15413 4870 aa4.25□□□□□ -1.73
SOD2-216ENST00000546260 RYR2Q92736 4967 aa4.25□□□□□ -1.73
SOD2-216ENST00000546260 LRP2P98164 4655 aa4.23□□□□□ -1.73
SOD2-216ENST00000546260 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
SOD2-216ENST00000546260 LPAP08519 4548 aa4.17□□□□□ -1.74
SOD2-216ENST00000546260 KRTAP17-1Q9BYP8 105 aa4.17□□□□□ -1.74
SOD2-216ENST00000546260 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
SOD2-216ENST00000546260 LCE2DQ5TA82 110 aaPredicted RBP4.13□□□□□ -1.75
SOD2-216ENST00000546260 EPPK1P58107 5090 aaKnown RBP4.12□□□□□ -1.75
SOD2-216ENST00000546260 PKHD1L1Q86WI1 4243 aa4.12□□□□□ -1.75
SOD2-216ENST00000546260 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
SOD2-216ENST00000546260 KRTAP8-1Q8IUC2 63 aa4.03□□□□□ -1.76
SOD2-216ENST00000546260 HERC2O95714 4834 aa4□□□□□ -1.77
SOD2-216ENST00000546260 TNXBP22105 4242 aa3.93□□□□□ -1.78
SOD2-216ENST00000546260 SPRR2GQ9BYE4 73 aa3.9□□□□□ -1.79
SOD2-216ENST00000546260 ABCA13Q86UQ4 5058 aa3.88□□□□□ -1.79
SOD2-216ENST00000546260 KRTAP19-1Q8IUB9 90 aa3.85□□□□□ -1.79
SOD2-216ENST00000546260 PCLOQ9Y6V0 5065 aa3.85□□□□□ -1.79
SOD2-216ENST00000546260 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
SOD2-216ENST00000546260 BIRC6Q9NR09 4857 aa3.82□□□□□ -1.8
SOD2-216ENST00000546260 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
SOD2-216ENST00000546260 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
SOD2-216ENST00000546260 MUC2Q02817 5179 aa3.77□□□□□ -1.81
SOD2-216ENST00000546260 KRTAP10-7P60409 375 aaPredicted RBP3.77□□□□□ -1.81
SOD2-216ENST00000546260 CRCT1Q9UGL9 99 aa3.76□□□□□ -1.81
SOD2-216ENST00000546260 HERC1Q15751 4861 aa3.76□□□□□ -1.81
SOD2-216ENST00000546260 KRTAP19-2Q3LHN2 52 aa3.74□□□□□ -1.81
SOD2-216ENST00000546260 MUC17Q685J3 4493 aa3.73□□□□□ -1.81
SOD2-216ENST00000546260 RNF213Q63HN8 5207 aa3.73□□□□□ -1.81
SOD2-216ENST00000546260 MT1HP80294 61 aa3.73□□□□□ -1.81
SOD2-216ENST00000546260 MT1FP04733 61 aa3.72□□□□□ -1.81
SOD2-216ENST00000546260 MT2AP02795 61 aa3.7□□□□□ -1.82
SOD2-216ENST00000546260 MT1XP80297 61 aa3.7□□□□□ -1.82
SOD2-216ENST00000546260 FSIP2Q5CZC0 6907 aa3.7□□□□□ -1.82
SOD2-216ENST00000546260 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
SOD2-216ENST00000546260 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
SOD2-216ENST00000546260 FAT4Q6V0I7 4981 aa3.65□□□□□ -1.82
SOD2-216ENST00000546260 UBR4Q5T4S7 5183 aa3.61□□□□□ -1.83
SOD2-216ENST00000546260 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
SOD2-216ENST00000546260 MT1BP07438 61 aa3.59□□□□□ -1.83
SOD2-216ENST00000546260 KRTAP19-8Q3LI54 63 aa3.58□□□□□ -1.84
SOD2-216ENST00000546260 HMCN2Q8NDA2 5059 aa3.56□□□□□ -1.84
SOD2-216ENST00000546260 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.84
SOD2-216ENST00000546260 LCE2CQ5TA81 110 aa3.52□□□□□ -1.85
SOD2-216ENST00000546260 KRTAP4-8A0A0G2JLE6 195 aa3.51□□□□□ -1.85
SOD2-216ENST00000546260 KRTAP4-8Q9BYQ9 185 aa3.51□□□□□ -1.85
SOD2-216ENST00000546260 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
SOD2-216ENST00000546260 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
SOD2-216ENST00000546260 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
SOD2-216ENST00000546260 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
SOD2-216ENST00000546260 KRTAP9-8Q9BYQ0 159 aa3.45□□□□□ -1.86
SOD2-216ENST00000546260 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
SOD2-216ENST00000546260 MT1GP13640 62 aa3.37□□□□□ -1.87
SOD2-216ENST00000546260 KMT2DO14686 5537 aa3.37□□□□□ -1.87
SOD2-216ENST00000546260 LCE3BQ5TA77 95 aa3.36□□□□□ -1.87
SOD2-216ENST00000546260 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
SOD2-216ENST00000546260 KRTAP9-3Q9BYQ3 159 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms