RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 MT1HP80294 61 aa7.03□□□□□ -1.28
ARHGEF28-214ENST00000545377 KRTAP10-7P60409 375 aaPredicted RBP6.97□□□□□ -1.29
ARHGEF28-214ENST00000545377 SVEP1Q4LDE5 3571 aa6.97□□□□□ -1.29
ARHGEF28-214ENST00000545377 CUBNO60494 3623 aa6.95□□□□□ -1.3
ARHGEF28-214ENST00000545377 KRTAP4-1Q9BYQ7 146 aa6.93□□□□□ -1.3
ARHGEF28-214ENST00000545377 MT2AP02795 61 aa6.85□□□□□ -1.31
ARHGEF28-214ENST00000545377 KRTAP19-5Q3LI72 72 aa6.73□□□□□ -1.33
ARHGEF28-214ENST00000545377 SPRR2EP22531 72 aa6.72□□□□□ -1.33
ARHGEF28-214ENST00000545377 SPRR2BP35325 72 aa6.72□□□□□ -1.33
ARHGEF28-214ENST00000545377 SPRR2AP35326 72 aa6.72□□□□□ -1.33
ARHGEF28-214ENST00000545377 CSMD3Q7Z407 3707 aa6.71□□□□□ -1.33
ARHGEF28-214ENST00000545377 MT1FP04733 61 aa6.71□□□□□ -1.34
ARHGEF28-214ENST00000545377 DNAH5Q8TE73 4624 aa6.68□□□□□ -1.34
ARHGEF28-214ENST00000545377 DNAH1Q9P2D7 4330 aa6.67□□□□□ -1.34
ARHGEF28-214ENST00000545377 DNAH9Q9NYC9 4486 aa6.67□□□□□ -1.34
ARHGEF28-214ENST00000545377 SPRR2GQ9BYE4 73 aa6.63□□□□□ -1.35
ARHGEF28-214ENST00000545377 VPS13CQ709C8 3753 aa6.61□□□□□ -1.35
ARHGEF28-214ENST00000545377 DNAH2Q9P225 4427 aa6.56□□□□□ -1.36
ARHGEF28-214ENST00000545377 PLECQ15149 4684 aaKnown RBP6.56□□□□□ -1.36
ARHGEF28-214ENST00000545377 DNAH10Q8IVF4 4471 aa6.55□□□□□ -1.36
ARHGEF28-214ENST00000545377 BSNQ9UPA5 3926 aa6.52□□□□□ -1.37
ARHGEF28-214ENST00000545377 LCE3CQ5T5A8 94 aa6.52□□□□□ -1.37
ARHGEF28-214ENST00000545377 SPRR2DP22532 72 aa6.49□□□□□ -1.37
ARHGEF28-214ENST00000545377 DNAH11Q96DT5 4516 aa6.42□□□□□ -1.38
ARHGEF28-214ENST00000545377 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
ARHGEF28-214ENST00000545377 FAT1Q14517 4588 aa6.38□□□□□ -1.39
ARHGEF28-214ENST00000545377 AKAP9Q99996 3911 aa6.37□□□□□ -1.39
ARHGEF28-214ENST00000545377 LCE2BO14633 110 aa6.35□□□□□ -1.39
ARHGEF28-214ENST00000545377 DNAH17Q9UFH2 4485 aa6.31□□□□□ -1.4
ARHGEF28-214ENST00000545377 FAT2Q9NYQ8 4349 aa6.3□□□□□ -1.4
ARHGEF28-214ENST00000545377 MT1GP13640 62 aa6.25□□□□□ -1.41
ARHGEF28-214ENST00000545377 LRP1BQ9NZR2 4599 aa6.24□□□□□ -1.41
ARHGEF28-214ENST00000545377 KRTAP12-4P60329 112 aa6.24□□□□□ -1.41
ARHGEF28-214ENST00000545377 DYNC1H1Q14204 4646 aaKnown RBP6.21□□□□□ -1.42
ARHGEF28-214ENST00000545377 RYR1P21817 5038 aa6.17□□□□□ -1.42
ARHGEF28-214ENST00000545377 VPS13DQ5THJ4 4388 aa6.15□□□□□ -1.43
ARHGEF28-214ENST00000545377 DNHD1Q96M86 4753 aa6.14□□□□□ -1.43
ARHGEF28-214ENST00000545377 DNAH8Q96JB1 4490 aa6.14□□□□□ -1.43
ARHGEF28-214ENST00000545377 SACSQ9NZJ4 4579 aa6.13□□□□□ -1.43
ARHGEF28-214ENST00000545377 ZNF469Q96JG9 3925 aaPredicted RBP6.12□□□□□ -1.43
ARHGEF28-214ENST00000545377 KRTAP19-4Q3LI73 84 aa6.09□□□□□ -1.43
ARHGEF28-214ENST00000545377 DNAH3Q8TD57 4116 aa6.08□□□□□ -1.44
ARHGEF28-214ENST00000545377 VPS13BQ7Z7G8 4022 aa6.08□□□□□ -1.44
ARHGEF28-214ENST00000545377 DYNC2H1Q8NCM8 4307 aaKnown RBP6.07□□□□□ -1.44
ARHGEF28-214ENST00000545377 KRTAP19-1Q8IUB9 90 aa6.07□□□□□ -1.44
ARHGEF28-214ENST00000545377 KRTAP19-8Q3LI54 63 aa6.05□□□□□ -1.44
ARHGEF28-214ENST00000545377 KRTAP4-8A0A0G2JLE6 195 aa6.03□□□□□ -1.44
ARHGEF28-214ENST00000545377 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
ARHGEF28-214ENST00000545377 MT1XP80297 61 aa6.02□□□□□ -1.45
ARHGEF28-214ENST00000545377 STARD9Q9P2P6 4700 aa6.01□□□□□ -1.45
ARHGEF28-214ENST00000545377 LCE2CQ5TA81 110 aa6.01□□□□□ -1.45
ARHGEF28-214ENST00000545377 ANK2Q01484 3957 aa6□□□□□ -1.45
ARHGEF28-214ENST00000545377 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.45
ARHGEF28-214ENST00000545377 APOBP04114 4563 aaKnown RBP5.96□□□□□ -1.45
ARHGEF28-214ENST00000545377 KRTAP17-1Q9BYP8 105 aa5.93□□□□□ -1.46
ARHGEF28-214ENST00000545377 MT1BP07438 61 aa5.91□□□□□ -1.46
ARHGEF28-214ENST00000545377 FAT3Q8TDW7 4589 aa5.9□□□□□ -1.47
ARHGEF28-214ENST00000545377 PRKDCP78527 4128 aaKnown RBP5.89□□□□□ -1.47
ARHGEF28-214ENST00000545377 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
ARHGEF28-214ENST00000545377 KMT2AQ03164 3969 aa5.87□□□□□ -1.47
ARHGEF28-214ENST00000545377 RYR3Q15413 4870 aa5.86□□□□□ -1.47
ARHGEF28-214ENST00000545377 LCE3DQ9BYE3 92 aa5.86□□□□□ -1.47
ARHGEF28-214ENST00000545377 LRP1Q07954 4544 aaKnown RBP5.86□□□□□ -1.47
ARHGEF28-214ENST00000545377 DNAH7Q8WXX0 4024 aa5.85□□□□□ -1.47
ARHGEF28-214ENST00000545377 MT4P47944 62 aa5.84□□□□□ -1.47
ARHGEF28-214ENST00000545377 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
ARHGEF28-214ENST00000545377 LYSTQ99698 3801 aa5.75□□□□□ -1.49
ARHGEF28-214ENST00000545377 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
ARHGEF28-214ENST00000545377 LCE3EQ5T5B0 92 aa5.71□□□□□ -1.49
ARHGEF28-214ENST00000545377 KRTAP19-3Q7Z4W3 81 aa5.71□□□□□ -1.5
ARHGEF28-214ENST00000545377 FRAS1Q86XX4 4008 aa5.67□□□□□ -1.5
ARHGEF28-214ENST00000545377 CMYA5Q8N3K9 4069 aa5.67□□□□□ -1.5
ARHGEF28-214ENST00000545377 KRTAP9-2Q9BYQ4 174 aa5.64□□□□□ -1.51
ARHGEF28-214ENST00000545377 KRTAP4-7Q9BYR0 210 aa5.64□□□□□ -1.51
ARHGEF28-214ENST00000545377 DNAH6Q9C0G6 4158 aa5.63□□□□□ -1.51
ARHGEF28-214ENST00000545377 HERC1Q15751 4861 aa5.59□□□□□ -1.51
ARHGEF28-214ENST00000545377 LCE1BQ5T7P3 118 aa5.59□□□□□ -1.52
ARHGEF28-214ENST00000545377 PKHD1L1Q86WI1 4243 aa5.57□□□□□ -1.52
ARHGEF28-214ENST00000545377 MYCBP2O75592 4640 aa5.56□□□□□ -1.52
ARHGEF28-214ENST00000545377 LCE1DQ5T752 114 aa5.52□□□□□ -1.53
ARHGEF28-214ENST00000545377 MT1LQ93083 61 aa5.52□□□□□ -1.53
ARHGEF28-214ENST00000545377 PKD1P98161 4303 aa5.52□□□□□ -1.53
ARHGEF28-214ENST00000545377 MT1EP04732 61 aa5.48□□□□□ -1.53
ARHGEF28-214ENST00000545377 MT3P25713 68 aa5.47□□□□□ -1.53
ARHGEF28-214ENST00000545377 HSPG2P98160 4391 aa5.43□□□□□ -1.54
ARHGEF28-214ENST00000545377 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
ARHGEF28-214ENST00000545377 LPAP08519 4548 aa5.4□□□□□ -1.54
ARHGEF28-214ENST00000545377 RYR2Q92736 4967 aa5.39□□□□□ -1.55
ARHGEF28-214ENST00000545377 LOC100996750A0A140TA64 210 aa5.39□□□□□ -1.55
ARHGEF28-214ENST00000545377 MT1MQ8N339 61 aa5.38□□□□□ -1.55
ARHGEF28-214ENST00000545377 KIAA1109Q2LD37 5005 aa5.34□□□□□ -1.56
ARHGEF28-214ENST00000545377 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
ARHGEF28-214ENST00000545377 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
ARHGEF28-214ENST00000545377 PRM1P04553 51 aa5.3□□□□□ -1.56
ARHGEF28-214ENST00000545377 HERC2O95714 4834 aa5.29□□□□□ -1.56
ARHGEF28-214ENST00000545377 KRTAP19-6Q3LI70 58 aa5.29□□□□□ -1.56
ARHGEF28-214ENST00000545377 LCE5AQ5TCM9 118 aa5.29□□□□□ -1.56
ARHGEF28-214ENST00000545377 BIRC6Q9NR09 4857 aa5.28□□□□□ -1.56
ARHGEF28-214ENST00000545377 PKHD1P08F94 4074 aa5.27□□□□□ -1.57
ARHGEF28-214ENST00000545377 PCLOQ9Y6V0 5065 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms