RNA–Protein interactions for RNA: ENST00000545250.5

TSC1-208, Transcript of TSC complex subunit 1, humanhuman

TSL 5 BASIC

Gene TSC1, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-208ENST00000545250 SPRR2EP22531 72 aa3.51□□□□□ -1.85
TSC1-208ENST00000545250 SPRR2BP35325 72 aa3.51□□□□□ -1.85
TSC1-208ENST00000545250 SPRR2AP35326 72 aa3.51□□□□□ -1.85
TSC1-208ENST00000545250 HRNRQ86YZ3 2850 aaPredicted RBP3.46□□□□□ -1.86
TSC1-208ENST00000545250 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
TSC1-208ENST00000545250 SPRR2DP22532 72 aa3.43□□□□□ -1.86
TSC1-208ENST00000545250 LCE2BO14633 110 aa3.4□□□□□ -1.87
TSC1-208ENST00000545250 MT3P25713 68 aa3.4□□□□□ -1.87
TSC1-208ENST00000545250 LCE3BQ5TA77 95 aa3.39□□□□□ -1.87
TSC1-208ENST00000545250 ALMS1Q8TCU4 4167 aa3.39□□□□□ -1.87
TSC1-208ENST00000545250 KRTAP4-5Q9BYR2 181 aa3.39□□□□□ -1.87
TSC1-208ENST00000545250 SPRR2GQ9BYE4 73 aa3.39□□□□□ -1.87
TSC1-208ENST00000545250 ZNF469Q96JG9 3925 aaPredicted RBP3.37□□□□□ -1.87
TSC1-208ENST00000545250 MT1HP80294 61 aa3.36□□□□□ -1.87
TSC1-208ENST00000545250 HUWE1Q7Z6Z7 4374 aaKnown RBP3.34□□□□□ -1.88
TSC1-208ENST00000545250 TRRAPQ9Y4A5 3859 aa3.33□□□□□ -1.88
TSC1-208ENST00000545250 OTOGQ6ZRI0 2925 aa3.29□□□□□ -1.88
TSC1-208ENST00000545250 MT2AP02795 61 aa3.28□□□□□ -1.88
TSC1-208ENST00000545250 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
TSC1-208ENST00000545250 AKAP9Q99996 3911 aa3.26□□□□□ -1.89
TSC1-208ENST00000545250 FBN1P35555 2871 aaKnown RBP3.26□□□□□ -1.89
TSC1-208ENST00000545250 LCE2CQ5TA81 110 aa3.25□□□□□ -1.89
TSC1-208ENST00000545250 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
TSC1-208ENST00000545250 CSMD3Q7Z407 3707 aa3.19□□□□□ -1.9
TSC1-208ENST00000545250 DNAH1Q9P2D7 4330 aa3.18□□□□□ -1.9
TSC1-208ENST00000545250 ANK3Q12955 4377 aaKnown RBP3.17□□□□□ -1.9
TSC1-208ENST00000545250 LCE2DQ5TA82 110 aaPredicted RBP3.16□□□□□ -1.9
TSC1-208ENST00000545250 MT1GP13640 62 aa3.16□□□□□ -1.9
TSC1-208ENST00000545250 MT1FP04733 61 aa3.14□□□□□ -1.91
TSC1-208ENST00000545250 SPRR5A0A1B0GTR4 108 aa3.06□□□□□ -1.92
TSC1-208ENST00000545250 KRTAP4-1Q9BYQ7 146 aa3.05□□□□□ -1.92
TSC1-208ENST00000545250 DNAH2Q9P225 4427 aa3.04□□□□□ -1.92
TSC1-208ENST00000545250 KRTAP19-8Q3LI54 63 aa3□□□□□ -1.93
TSC1-208ENST00000545250 CMYA5Q8N3K9 4069 aa3□□□□□ -1.93
TSC1-208ENST00000545250 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
TSC1-208ENST00000545250 MT4P47944 62 aa2.96□□□□□ -1.94
TSC1-208ENST00000545250 DNAH7Q8WXX0 4024 aa2.95□□□□□ -1.94
TSC1-208ENST00000545250 LCE1DQ5T752 114 aa2.94□□□□□ -1.94
TSC1-208ENST00000545250 ANK2Q01484 3957 aa2.93□□□□□ -1.94
TSC1-208ENST00000545250 LYSTQ99698 3801 aa2.92□□□□□ -1.94
TSC1-208ENST00000545250 PRM1P04553 51 aa2.92□□□□□ -1.94
TSC1-208ENST00000545250 KRTAP19-3Q7Z4W3 81 aa2.92□□□□□ -1.94
TSC1-208ENST00000545250 MT1LQ93083 61 aa2.91□□□□□ -1.94
TSC1-208ENST00000545250 DNAH6Q9C0G6 4158 aa2.91□□□□□ -1.94
TSC1-208ENST00000545250 MT1XP80297 61 aa2.9□□□□□ -1.95
TSC1-208ENST00000545250 KMT2AQ03164 3969 aa2.89□□□□□ -1.95
TSC1-208ENST00000545250 KRTAP19-1Q8IUB9 90 aa2.89□□□□□ -1.95
TSC1-208ENST00000545250 DNAH3Q8TD57 4116 aa2.88□□□□□ -1.95
TSC1-208ENST00000545250 LCE5AQ5TCM9 118 aa2.86□□□□□ -1.95
TSC1-208ENST00000545250 PRKDCP78527 4128 aaKnown RBP2.84□□□□□ -1.96
TSC1-208ENST00000545250 FRAS1Q86XX4 4008 aa2.82□□□□□ -1.96
TSC1-208ENST00000545250 LRP1Q07954 4544 aaKnown RBP2.81□□□□□ -1.96
TSC1-208ENST00000545250 DNAH9Q9NYC9 4486 aa2.8□□□□□ -1.96
TSC1-208ENST00000545250 DNAH17Q9UFH2 4485 aa2.77□□□□□ -1.97
TSC1-208ENST00000545250 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
TSC1-208ENST00000545250 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
TSC1-208ENST00000545250 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
TSC1-208ENST00000545250 LCE1AQ5T7P2 110 aa2.77□□□□□ -1.97
TSC1-208ENST00000545250 DNAH10Q8IVF4 4471 aa2.76□□□□□ -1.97
TSC1-208ENST00000545250 KRTAP4-8A0A0G2JLE6 195 aa2.75□□□□□ -1.97
TSC1-208ENST00000545250 KRTAP4-8Q9BYQ9 185 aa2.75□□□□□ -1.97
TSC1-208ENST00000545250 MT1EP04732 61 aa2.74□□□□□ -1.97
TSC1-208ENST00000545250 MT1BP07438 61 aa2.73□□□□□ -1.97
TSC1-208ENST00000545250 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
TSC1-208ENST00000545250 FAT2Q9NYQ8 4349 aa2.72□□□□□ -1.97
TSC1-208ENST00000545250 VPS13BQ7Z7G8 4022 aa2.71□□□□□ -1.98
TSC1-208ENST00000545250 MT1MQ8N339 61 aa2.69□□□□□ -1.98
TSC1-208ENST00000545250 FLGP20930 4061 aaPredicted RBP2.68□□□□□ -1.98
TSC1-208ENST00000545250 DNAH11Q96DT5 4516 aa2.67□□□□□ -1.98
TSC1-208ENST00000545250 KRTAP9-8Q9BYQ0 159 aa2.66□□□□□ -1.98
TSC1-208ENST00000545250 STARD9Q9P2P6 4700 aa2.66□□□□□ -1.98
TSC1-208ENST00000545250 HECTD4Q9Y4D8 3996 aa2.65□□□□□ -1.98
TSC1-208ENST00000545250 DNAH8Q96JB1 4490 aa2.65□□□□□ -1.99
TSC1-208ENST00000545250 KRTAP9-3Q9BYQ3 159 aa2.65□□□□□ -1.99
TSC1-208ENST00000545250 PLECQ15149 4684 aaKnown RBP2.64□□□□□ -1.99
TSC1-208ENST00000545250 KRTAP19-6Q3LI70 58 aa2.62□□□□□ -1.99
TSC1-208ENST00000545250 DNAH5Q8TE73 4624 aa2.6□□□□□ -1.99
TSC1-208ENST00000545250 VPS13DQ5THJ4 4388 aa2.59□□□□□ -1.99
TSC1-208ENST00000545250 PKHD1L1Q86WI1 4243 aa2.58□□□□□ -2
TSC1-208ENST00000545250 MT1AP04731 61 aa2.58□□□□□ -2
TSC1-208ENST00000545250 PKHD1P08F94 4074 aa2.58□□□□□ -2
TSC1-208ENST00000545250 SACSQ9NZJ4 4579 aa2.57□□□□□ -2
TSC1-208ENST00000545250 DYNC2H1Q8NCM8 4307 aaKnown RBP2.57□□□□□ -2
TSC1-208ENST00000545250 KRTAP9-2Q9BYQ4 174 aa2.57□□□□□ -2
TSC1-208ENST00000545250 DNHD1Q96M86 4753 aa2.56□□□□□ -2
TSC1-208ENST00000545250 LCE4AQ5TA78 99 aa2.55□□□□□ -2
TSC1-208ENST00000545250 KRTAP4-7Q9BYR0 210 aa2.55□□□□□ -2
TSC1-208ENST00000545250 KRTAP2-3P0C7H8 128 aa2.53□□□□□ -2
TSC1-208ENST00000545250 KRTAP2-4Q9BYR9 128 aa2.53□□□□□ -2
TSC1-208ENST00000545250 KRTAP9-6A0A140TA67 174 aa2.53□□□□□ -2
TSC1-208ENST00000545250 KRTAP2-1Q9BYU5 128 aa2.51□□□□□ -2.01
TSC1-208ENST00000545250 LRP1BQ9NZR2 4599 aa2.5□□□□□ -2.01
TSC1-208ENST00000545250 LOC100996750A0A140TA64 210 aa2.49□□□□□ -2.01
TSC1-208ENST00000545250 FAT1Q14517 4588 aa2.48□□□□□ -2.01
TSC1-208ENST00000545250 KRTAP9-9Q9BYP9 154 aa2.47□□□□□ -2.01
TSC1-208ENST00000545250 DYNC1H1Q14204 4646 aaKnown RBP2.46□□□□□ -2.02
TSC1-208ENST00000545250 FAT3Q8TDW7 4589 aa2.45□□□□□ -2.02
TSC1-208ENST00000545250 APOBP04114 4563 aaKnown RBP2.45□□□□□ -2.02
TSC1-208ENST00000545250 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
TSC1-208ENST00000545250 MYCBP2O75592 4640 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms