RNA–Protein interactions for RNA: ENST00000545061.5

SCN8A-203, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 11,433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-203ENST00000545061 CUBNO60494 3623 aa3.51□□□□□ -1.85
SCN8A-203ENST00000545061 DNAH3Q8TD57 4116 aa3.49□□□□□ -1.85
SCN8A-203ENST00000545061 MUC3AQ02505 3323 aa3.48□□□□□ -1.85
SCN8A-203ENST00000545061 BSNQ9UPA5 3926 aa3.46□□□□□ -1.86
SCN8A-203ENST00000545061 SVEP1Q4LDE5 3571 aa3.43□□□□□ -1.86
SCN8A-203ENST00000545061 LYSTQ99698 3801 aa3.42□□□□□ -1.86
SCN8A-203ENST00000545061 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
SCN8A-203ENST00000545061 CSMD2Q7Z408 3487 aa3.4□□□□□ -1.87
SCN8A-203ENST00000545061 LORP23490 312 aaPredicted RBP3.34□□□□□ -1.87
SCN8A-203ENST00000545061 DNAH7Q8WXX0 4024 aa3.31□□□□□ -1.88
SCN8A-203ENST00000545061 KRTAP19-5Q3LI72 72 aa3.3□□□□□ -1.88
SCN8A-203ENST00000545061 SPRR2GQ9BYE4 73 aa3.3□□□□□ -1.88
SCN8A-203ENST00000545061 ZNF469Q96JG9 3925 aaPredicted RBP3.3□□□□□ -1.88
SCN8A-203ENST00000545061 KMT2AQ03164 3969 aa3.29□□□□□ -1.88
SCN8A-203ENST00000545061 MT1HL1P0DM35 61 aa3.29□□□□□ -1.88
SCN8A-203ENST00000545061 DNAH6Q9C0G6 4158 aa3.27□□□□□ -1.89
SCN8A-203ENST00000545061 LCE3BQ5TA77 95 aa3.26□□□□□ -1.89
SCN8A-203ENST00000545061 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
SCN8A-203ENST00000545061 ANK2Q01484 3957 aa3.24□□□□□ -1.89
SCN8A-203ENST00000545061 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
SCN8A-203ENST00000545061 HECTD4Q9Y4D8 3996 aa3.23□□□□□ -1.89
SCN8A-203ENST00000545061 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
SCN8A-203ENST00000545061 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
SCN8A-203ENST00000545061 DNAH2Q9P225 4427 aa3.19□□□□□ -1.9
SCN8A-203ENST00000545061 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
SCN8A-203ENST00000545061 VPS13BQ7Z7G8 4022 aa3.11□□□□□ -1.91
SCN8A-203ENST00000545061 FRAS1Q86XX4 4008 aa3.1□□□□□ -1.91
SCN8A-203ENST00000545061 ANK3Q12955 4377 aaKnown RBP3.03□□□□□ -1.92
SCN8A-203ENST00000545061 LCE2BO14633 110 aa3□□□□□ -1.93
SCN8A-203ENST00000545061 PRM1P04553 51 aa3□□□□□ -1.93
SCN8A-203ENST00000545061 SPRR2EP22531 72 aa2.99□□□□□ -1.93
SCN8A-203ENST00000545061 SPRR2BP35325 72 aa2.99□□□□□ -1.93
SCN8A-203ENST00000545061 SPRR2AP35326 72 aa2.99□□□□□ -1.93
SCN8A-203ENST00000545061 MT1HP80294 61 aa2.98□□□□□ -1.93
SCN8A-203ENST00000545061 DNAH1Q9P2D7 4330 aa2.98□□□□□ -1.93
SCN8A-203ENST00000545061 HUWE1Q7Z6Z7 4374 aaKnown RBP2.97□□□□□ -1.93
SCN8A-203ENST00000545061 MT2AP02795 61 aa2.96□□□□□ -1.94
SCN8A-203ENST00000545061 MT1GP13640 62 aa2.96□□□□□ -1.94
SCN8A-203ENST00000545061 SPRR2DP22532 72 aa2.93□□□□□ -1.94
SCN8A-203ENST00000545061 MT1LQ93083 61 aa2.87□□□□□ -1.95
SCN8A-203ENST00000545061 PRKDCP78527 4128 aaKnown RBP2.85□□□□□ -1.95
SCN8A-203ENST00000545061 KRTAP19-8Q3LI54 63 aa2.85□□□□□ -1.95
SCN8A-203ENST00000545061 MT1FP04733 61 aa2.84□□□□□ -1.95
SCN8A-203ENST00000545061 LCE2CQ5TA81 110 aa2.81□□□□□ -1.96
SCN8A-203ENST00000545061 KRTAP4-5Q9BYR2 181 aa2.8□□□□□ -1.96
SCN8A-203ENST00000545061 MT1XP80297 61 aa2.78□□□□□ -1.96
SCN8A-203ENST00000545061 DNAH8Q96JB1 4490 aa2.75□□□□□ -1.97
SCN8A-203ENST00000545061 DNAH10Q8IVF4 4471 aa2.75□□□□□ -1.97
SCN8A-203ENST00000545061 KRTAP4-1Q9BYQ7 146 aa2.74□□□□□ -1.97
SCN8A-203ENST00000545061 KRTAP19-3Q7Z4W3 81 aa2.72□□□□□ -1.97
SCN8A-203ENST00000545061 DNAH9Q9NYC9 4486 aa2.72□□□□□ -1.97
SCN8A-203ENST00000545061 MT1EP04732 61 aa2.71□□□□□ -1.98
SCN8A-203ENST00000545061 KRTAP19-1Q8IUB9 90 aa2.7□□□□□ -1.98
SCN8A-203ENST00000545061 LCE2DQ5TA82 110 aaPredicted RBP2.7□□□□□ -1.98
SCN8A-203ENST00000545061 VPS13DQ5THJ4 4388 aa2.68□□□□□ -1.98
SCN8A-203ENST00000545061 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
SCN8A-203ENST00000545061 LCE1DQ5T752 114 aa2.66□□□□□ -1.98
SCN8A-203ENST00000545061 DNAH17Q9UFH2 4485 aa2.65□□□□□ -1.98
SCN8A-203ENST00000545061 PKHD1P08F94 4074 aa2.64□□□□□ -1.99
SCN8A-203ENST00000545061 DYNC2H1Q8NCM8 4307 aaKnown RBP2.64□□□□□ -1.99
SCN8A-203ENST00000545061 PKHD1L1Q86WI1 4243 aa2.63□□□□□ -1.99
SCN8A-203ENST00000545061 DNAH11Q96DT5 4516 aa2.62□□□□□ -1.99
SCN8A-203ENST00000545061 MT1AP04731 61 aa2.62□□□□□ -1.99
SCN8A-203ENST00000545061 FAT2Q9NYQ8 4349 aa2.61□□□□□ -1.99
SCN8A-203ENST00000545061 LRP1Q07954 4544 aaKnown RBP2.61□□□□□ -1.99
SCN8A-203ENST00000545061 MT1MQ8N339 61 aa2.57□□□□□ -2
SCN8A-203ENST00000545061 KRTAP2-3P0C7H8 128 aa2.54□□□□□ -2
SCN8A-203ENST00000545061 KRTAP2-4Q9BYR9 128 aa2.54□□□□□ -2
SCN8A-203ENST00000545061 KRTAP2-1Q9BYU5 128 aa2.54□□□□□ -2
SCN8A-203ENST00000545061 PLECQ15149 4684 aaKnown RBP2.53□□□□□ -2
SCN8A-203ENST00000545061 MT1BP07438 61 aa2.52□□□□□ -2.01
SCN8A-203ENST00000545061 KRTAP4-8A0A0G2JLE6 195 aa2.52□□□□□ -2.01
SCN8A-203ENST00000545061 KRTAP4-8Q9BYQ9 185 aa2.52□□□□□ -2.01
SCN8A-203ENST00000545061 MT4P47944 62 aa2.51□□□□□ -2.01
SCN8A-203ENST00000545061 STARD9Q9P2P6 4700 aa2.5□□□□□ -2.01
SCN8A-203ENST00000545061 LCE5AQ5TCM9 118 aa2.5□□□□□ -2.01
SCN8A-203ENST00000545061 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
SCN8A-203ENST00000545061 HSPG2P98160 4391 aa2.48□□□□□ -2.01
SCN8A-203ENST00000545061 PKD1P98161 4303 aa2.44□□□□□ -2.02
SCN8A-203ENST00000545061 KRTAP9-8Q9BYQ0 159 aa2.42□□□□□ -2.02
SCN8A-203ENST00000545061 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
SCN8A-203ENST00000545061 LCE1EQ5T753 118 aa2.42□□□□□ -2.02
SCN8A-203ENST00000545061 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
SCN8A-203ENST00000545061 LCE1AQ5T7P2 110 aa2.42□□□□□ -2.02
SCN8A-203ENST00000545061 KRTAP17-1Q9BYP8 105 aa2.42□□□□□ -2.02
SCN8A-203ENST00000545061 LCE4AQ5TA78 99 aa2.41□□□□□ -2.02
SCN8A-203ENST00000545061 DNAH5Q8TE73 4624 aa2.41□□□□□ -2.02
SCN8A-203ENST00000545061 KRTAP4-7Q9BYR0 210 aa2.41□□□□□ -2.02
SCN8A-203ENST00000545061 LRP1BQ9NZR2 4599 aa2.4□□□□□ -2.03
SCN8A-203ENST00000545061 TNXBP22105 4242 aa2.38□□□□□ -2.03
SCN8A-203ENST00000545061 KRTAP9-3Q9BYQ3 159 aa2.38□□□□□ -2.03
SCN8A-203ENST00000545061 APOBP04114 4563 aaKnown RBP2.37□□□□□ -2.03
SCN8A-203ENST00000545061 KRTAP2-2Q9BYT5 123 aa2.37□□□□□ -2.03
SCN8A-203ENST00000545061 LOC100996750A0A140TA64 210 aa2.36□□□□□ -2.03
SCN8A-203ENST00000545061 SACSQ9NZJ4 4579 aa2.34□□□□□ -2.03
SCN8A-203ENST00000545061 FAT1Q14517 4588 aa2.33□□□□□ -2.04
SCN8A-203ENST00000545061 DNHD1Q96M86 4753 aa2.31□□□□□ -2.04
SCN8A-203ENST00000545061 DYNC1H1Q14204 4646 aaKnown RBP2.3□□□□□ -2.04
SCN8A-203ENST00000545061 FAT3Q8TDW7 4589 aa2.29□□□□□ -2.04
SCN8A-203ENST00000545061 HYDINQ4G0P3 5121 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 280.1 ms